EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038057 (Gene tree)
Gene ID: 41542
Gene Symbol: CG12267
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2005 bases
Position: chr3R:12460414-12462418
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082104	RNA_pol_Rpc82	PF05645.13	2.1e-35	1	1
FBpp0292147	RNA_pol_Rpc82	PF05645.13	2.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082635	-	1592	-	FBpp0082104	522 (aa)	-	Q9VG60
FBtr0303028	-	1650	-	FBpp0292147	522 (aa)	-	Q9VG60

Gene Model

Click here to download FBgn0038057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038057	CG12267	96	33.270	ENSG00000186141	POLR3C	97	33.270	Homo_sapiens
FBgn0038057	CG12267	98	31.569	ENSAPOG00000008722	polr3c	99	31.569	Acanthochromis_polyacanthus
FBgn0038057	CG12267	96	32.890	ENSAMEG00000017531	POLR3C	97	32.890	Ailuropoda_melanoleuca
FBgn0038057	CG12267	98	30.769	ENSACIG00000008064	polr3c	99	30.769	Amphilophus_citrinellus
FBgn0038057	CG12267	98	32.397	ENSAOCG00000011695	polr3c	99	32.397	Amphiprion_ocellaris
FBgn0038057	CG12267	98	32.584	ENSAPEG00000004426	polr3c	99	32.584	Amphiprion_percula
FBgn0038057	CG12267	96	33.270	ENSANAG00000036434	POLR3C	97	33.270	Aotus_nancymaae
FBgn0038057	CG12267	97	31.934	ENSACLG00000019970	polr3c	99	31.934	Astatotilapia_calliptera
FBgn0038057	CG12267	96	33.080	ENSBTAG00000021637	POLR3C	97	33.080	Bos_taurus
FBgn0038057	CG12267	96	33.459	ENSCJAG00000002314	POLR3C	97	33.459	Callithrix_jacchus
FBgn0038057	CG12267	96	33.080	ENSCAFG00000011257	POLR3C	98	32.609	Canis_familiaris
FBgn0038057	CG12267	92	32.609	ENSCAFG00020020066	POLR3C	98	32.609	Canis_lupus_dingo
FBgn0038057	CG12267	96	33.270	ENSCHIG00000022431	POLR3C	97	33.270	Capra_hircus
FBgn0038057	CG12267	96	33.650	ENSTSYG00000002292	POLR3C	97	33.650	Carlito_syrichta
FBgn0038057	CG12267	96	32.514	ENSCPOG00000004654	POLR3C	97	32.514	Cavia_porcellus
FBgn0038057	CG12267	96	33.270	ENSCCAG00000027077	POLR3C	97	33.270	Cebus_capucinus
FBgn0038057	CG12267	96	32.703	ENSCATG00000040166	POLR3C	97	32.703	Cercocebus_atys
FBgn0038057	CG12267	96	32.024	ENSCLAG00000001652	POLR3C	97	32.024	Chinchilla_lanigera
FBgn0038057	CG12267	96	32.892	ENSCSAG00000001762	POLR3C	97	32.892	Chlorocebus_sabaeus
FBgn0038057	CG12267	96	32.331	ENSCHOG00000006911	POLR3C	97	32.519	Choloepus_hoffmanni
FBgn0038057	CG12267	96	33.081	ENSCPBG00000007883	POLR3C	97	33.083	Chrysemys_picta_bellii
FBgn0038057	CG12267	97	33.084	ENSCANG00000032538	POLR3C	98	33.084	Colobus_angolensis_palliatus
FBgn0038057	CG12267	96	33.714	ENSCGRG00001005471	Polr3c	97	33.714	Cricetulus_griseus_chok1gshd
FBgn0038057	CG12267	96	33.714	ENSCGRG00000016787	Polr3c	97	33.714	Cricetulus_griseus_crigri
FBgn0038057	CG12267	97	31.844	ENSCSEG00000002425	polr3c	97	31.844	Cynoglossus_semilaevis
FBgn0038057	CG12267	97	31.136	ENSCVAG00000022458	polr3c	99	31.009	Cyprinodon_variegatus
FBgn0038057	CG12267	97	31.136	ENSCVAG00000009443	polr3c	99	31.009	Cyprinodon_variegatus
FBgn0038057	CG12267	97	30.912	ENSDARG00000057562	polr3c	99	30.912	Danio_rerio
FBgn0038057	CG12267	58	38.689	ENSDNOG00000012149	POLR3C	78	38.689	Dasypus_novemcinctus
FBgn0038057	CG12267	96	33.586	ENSDORG00000013430	Polr3c	97	33.586	Dipodomys_ordii
FBgn0038057	CG12267	83	31.947	ENSETEG00000017696	POLR3C	84	31.947	Echinops_telfairi
FBgn0038057	CG12267	96	33.270	ENSEASG00005007417	POLR3C	97	33.270	Equus_asinus_asinus
FBgn0038057	CG12267	96	31.939	ENSECAG00000023713	POLR3C	97	31.939	Equus_caballus
FBgn0038057	CG12267	96	32.190	ENSEEUG00000011124	POLR3C	97	32.190	Erinaceus_europaeus
FBgn0038057	CG12267	97	31.434	ENSELUG00000013209	polr3c	99	31.434	Esox_lucius
FBgn0038057	CG12267	97	33.333	ENSFCAG00000013360	POLR3C	97	33.460	Felis_catus
FBgn0038057	CG12267	96	33.081	ENSFDAG00000021078	POLR3C	97	33.081	Fukomys_damarensis
FBgn0038057	CG12267	83	30.065	ENSGALG00000052515	-	98	30.065	Gallus_gallus
FBgn0038057	CG12267	97	30.490	ENSGAFG00000014721	polr3c	99	30.403	Gambusia_affinis
FBgn0038057	CG12267	97	30.427	ENSGACG00000011829	polr3c	98	30.755	Gasterosteus_aculeatus
FBgn0038057	CG12267	96	33.270	ENSGAGG00000010176	POLR3C	97	33.270	Gopherus_agassizii
FBgn0038057	CG12267	96	33.270	ENSGGOG00000007279	POLR3C	97	33.270	Gorilla_gorilla
FBgn0038057	CG12267	97	31.934	ENSHBUG00000003619	polr3c	99	31.934	Haplochromis_burtoni
FBgn0038057	CG12267	96	33.081	ENSHGLG00000014978	POLR3C	97	33.081	Heterocephalus_glaber_female
FBgn0038057	CG12267	96	33.081	ENSHGLG00100015620	POLR3C	97	33.081	Heterocephalus_glaber_male
FBgn0038057	CG12267	98	31.895	ENSHCOG00000000823	polr3c	99	31.895	Hippocampus_comes
FBgn0038057	CG12267	97	30.755	ENSIPUG00000008657	polr3c	99	30.939	Ictalurus_punctatus
FBgn0038057	CG12267	96	33.270	ENSSTOG00000014601	POLR3C	97	33.270	Ictidomys_tridecemlineatus
FBgn0038057	CG12267	96	33.459	ENSJJAG00000011447	Polr3c	97	33.459	Jaculus_jaculus
FBgn0038057	CG12267	99	31.059	ENSKMAG00000001574	polr3c	100	31.818	Kryptolebias_marmoratus
FBgn0038057	CG12267	98	30.182	ENSLBEG00000026567	polr3c	99	30.182	Labrus_bergylta
FBgn0038057	CG12267	96	33.333	ENSLAFG00000029485	POLR3C	97	33.333	Loxodonta_africana
FBgn0038057	CG12267	96	32.892	ENSMFAG00000040338	POLR3C	97	32.892	Macaca_fascicularis
FBgn0038057	CG12267	96	32.892	ENSMMUG00000016735	POLR3C	97	32.892	Macaca_mulatta
FBgn0038057	CG12267	96	32.892	ENSMNEG00000040944	POLR3C	97	32.892	Macaca_nemestrina
FBgn0038057	CG12267	96	32.892	ENSMLEG00000031091	POLR3C	97	32.892	Mandrillus_leucophaeus
FBgn0038057	CG12267	97	30.755	ENSMAMG00000014770	polr3c	98	30.755	Mastacembelus_armatus
FBgn0038057	CG12267	97	32.288	ENSMZEG00005015882	polr3c	99	32.288	Maylandia_zebra
FBgn0038057	CG12267	57	31.611	ENSMAUG00000021521	-	82	31.611	Mesocricetus_auratus
FBgn0038057	CG12267	96	33.143	ENSMAUG00000001454	-	97	33.143	Mesocricetus_auratus
FBgn0038057	CG12267	96	32.703	ENSMICG00000034253	POLR3C	97	32.703	Microcebus_murinus
FBgn0038057	CG12267	96	33.463	ENSMOCG00000000997	Polr3c	97	33.463	Microtus_ochrogaster
FBgn0038057	CG12267	98	30.220	ENSMMOG00000003989	polr3c	99	30.220	Mola_mola
FBgn0038057	CG12267	96	32.895	ENSMODG00000018745	-	72	33.083	Monodelphis_domestica
FBgn0038057	CG12267	98	31.752	ENSMALG00000000156	polr3c	99	31.752	Monopterus_albus
FBgn0038057	CG12267	96	33.905	MGP_CAROLIEiJ_G0025390	Polr3c	97	33.905	Mus_caroli
FBgn0038057	CG12267	96	33.905	ENSMUSG00000028099	Polr3c	97	33.905	Mus_musculus
FBgn0038057	CG12267	96	33.523	MGP_PahariEiJ_G0026835	Polr3c	97	33.712	Mus_pahari
FBgn0038057	CG12267	96	34.095	MGP_SPRETEiJ_G0026337	Polr3c	97	34.095	Mus_spretus
FBgn0038057	CG12267	96	32.890	ENSMPUG00000000656	POLR3C	97	32.890	Mustela_putorius_furo
FBgn0038057	CG12267	96	31.509	ENSMLUG00000004060	POLR3C	97	31.509	Myotis_lucifugus
FBgn0038057	CG12267	96	33.586	ENSNGAG00000013090	Polr3c	97	33.776	Nannospalax_galili
FBgn0038057	CG12267	97	31.627	ENSNBRG00000003707	polr3c	99	31.934	Neolamprologus_brichardi
FBgn0038057	CG12267	96	33.270	ENSNLEG00000005645	POLR3C	97	33.270	Nomascus_leucogenys
FBgn0038057	CG12267	57	39.316	ENSMEUG00000012664	POLR3C	57	39.316	Notamacropus_eugenii
FBgn0038057	CG12267	96	32.510	ENSOPRG00000004244	POLR3C	97	32.510	Ochotona_princeps
FBgn0038057	CG12267	97	32.959	ENSODEG00000000304	POLR3C	98	32.959	Octodon_degus
FBgn0038057	CG12267	97	32.000	ENSONIG00000006370	polr3c	99	32.000	Oreochromis_niloticus
FBgn0038057	CG12267	96	33.270	ENSOCUG00000003050	POLR3C	97	33.270	Oryctolagus_cuniculus
FBgn0038057	CG12267	97	31.091	ENSORLG00000010133	polr3c	98	31.091	Oryzias_latipes
FBgn0038057	CG12267	97	30.713	ENSORLG00020009245	polr3c	98	30.896	Oryzias_latipes_hni
FBgn0038057	CG12267	97	30.826	ENSORLG00015015223	polr3c	98	30.826	Oryzias_latipes_hsok
FBgn0038057	CG12267	96	33.650	ENSOGAG00000000209	POLR3C	97	33.650	Otolemur_garnettii
FBgn0038057	CG12267	96	33.270	ENSOARG00000020588	POLR3C	97	33.270	Ovis_aries
FBgn0038057	CG12267	96	33.270	ENSPPAG00000025184	POLR3C	97	33.270	Pan_paniscus
FBgn0038057	CG12267	96	33.460	ENSPPRG00000008809	POLR3C	97	33.460	Panthera_pardus
FBgn0038057	CG12267	96	33.460	ENSPTIG00000009916	POLR3C	97	33.460	Panthera_tigris_altaica
FBgn0038057	CG12267	96	33.270	ENSPTRG00000001208	POLR3C	97	33.270	Pan_troglodytes
FBgn0038057	CG12267	96	32.892	ENSPANG00000019404	POLR3C	97	32.892	Papio_anubis
FBgn0038057	CG12267	97	30.798	ENSPKIG00000014883	polr3c	99	30.798	Paramormyrops_kingsleyae
FBgn0038057	CG12267	96	33.081	ENSPSIG00000004694	POLR3C	97	33.081	Pelodiscus_sinensis
FBgn0038057	CG12267	97	31.193	ENSPMGG00000007761	polr3c	99	31.193	Periophthalmus_magnuspinnatus
FBgn0038057	CG12267	96	32.952	ENSPEMG00000016322	Polr3c	97	32.952	Peromyscus_maniculatus_bairdii
FBgn0038057	CG12267	96	32.519	ENSPCIG00000011954	POLR3C	97	32.707	Phascolarctos_cinereus
FBgn0038057	CG12267	98	30.970	ENSPLAG00000018932	polr3c	99	30.970	Poecilia_latipinna
FBgn0038057	CG12267	90	38.953	ENSPMEG00000023273	polr3c	99	30.018	Poecilia_mexicana
FBgn0038057	CG12267	98	30.474	ENSPREG00000017050	polr3c	99	30.037	Poecilia_reticulata
FBgn0038057	CG12267	96	33.459	ENSPPYG00000000936	POLR3C	97	33.459	Pongo_abelii
FBgn0038057	CG12267	88	33.745	ENSPCAG00000010501	POLR3C	98	34.151	Procavia_capensis
FBgn0038057	CG12267	83	39.669	ENSPCOG00000024937	POLR3C	97	39.669	Propithecus_coquereli
FBgn0038057	CG12267	96	33.145	ENSPVAG00000014483	POLR3C	97	33.333	Pteropus_vampyrus
FBgn0038057	CG12267	97	31.934	ENSPNYG00000004504	polr3c	99	31.934	Pundamilia_nyererei
FBgn0038057	CG12267	96	33.905	ENSRNOG00000033560	Polr3c	97	33.905	Rattus_norvegicus
FBgn0038057	CG12267	96	32.892	ENSRBIG00000035432	POLR3C	97	32.892	Rhinopithecus_bieti
FBgn0038057	CG12267	96	32.892	ENSRROG00000039959	POLR3C	97	32.892	Rhinopithecus_roxellana
FBgn0038057	CG12267	87	34.261	ENSSBOG00000028429	POLR3C	98	34.261	Saimiri_boliviensis_boliviensis
FBgn0038057	CG12267	96	32.895	ENSSHAG00000018565	POLR3C	97	33.083	Sarcophilus_harrisii
FBgn0038057	CG12267	97	30.812	ENSSFOG00015021863	polr3c	99	30.812	Scleropages_formosus
FBgn0038057	CG12267	97	31.559	ENSSMAG00000016000	polr3c	98	31.559	Scophthalmus_maximus
FBgn0038057	CG12267	98	31.157	ENSSDUG00000006590	polr3c	99	31.157	Seriola_dumerili
FBgn0038057	CG12267	98	31.354	ENSSLDG00000015614	polr3c	99	31.354	Seriola_lalandi_dorsalis
FBgn0038057	CG12267	58	39.016	ENSSARG00000014380	POLR3C	88	39.016	Sorex_araneus
FBgn0038057	CG12267	96	32.957	ENSSPUG00000001834	POLR3C	97	32.957	Sphenodon_punctatus
FBgn0038057	CG12267	98	32.156	ENSSPAG00000022520	polr3c	99	32.156	Stegastes_partitus
FBgn0038057	CG12267	96	32.892	ENSSSCG00000006691	POLR3C	97	32.892	Sus_scrofa
FBgn0038057	CG12267	96	30.361	ENSTGUG00000016941	POLR3C	97	30.361	Taeniopygia_guttata
FBgn0038057	CG12267	58	39.073	ENSTBEG00000015610	POLR3C	95	34.625	Tupaia_belangeri
FBgn0038057	CG12267	96	32.890	ENSUAMG00000021906	POLR3C	97	32.890	Ursus_americanus
FBgn0038057	CG12267	96	32.890	ENSUMAG00000010180	POLR3C	97	32.890	Ursus_maritimus
FBgn0038057	CG12267	96	33.080	ENSVVUG00000007421	POLR3C	97	33.080	Vulpes_vulpes
FBgn0038057	CG12267	98	30.645	ENSXMAG00000016215	polr3c	99	30.561	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003697	single-stranded DNA binding	-	IEA	Function
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process