EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038106 (Gene tree)
Gene ID: 41597
Gene Symbol: CG7488
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1306 bases
Position: chr3R:12995620-12996925
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082163	MMR_HSR1	PF01926.23	3.4e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082695	-	1249	-	FBpp0082163	373 (aa)	-	Q9VG07

Gene Model

Click here to download FBgn0038106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038106's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038106	CG7488	83	31.077	ENSG00000132591	ERAL1	74	31.077	Homo_sapiens
FBgn0038106	CG7488	83	30.982	ENSAMEG00000004602	ERAL1	74	30.887	Ailuropoda_melanoleuca
FBgn0038106	CG7488	83	30.000	ENSACIG00000011545	eral1	76	30.000	Amphilophus_citrinellus
FBgn0038106	CG7488	81	30.137	ENSAPLG00000014894	ERAL1	98	30.137	Anas_platyrhynchos
FBgn0038106	CG7488	83	31.077	ENSANAG00000022216	-	74	31.077	Aotus_nancymaae
FBgn0038106	CG7488	83	30.000	ENSACLG00000006437	eral1	76	30.000	Astatotilapia_calliptera
FBgn0038106	CG7488	86	33.056	ENSAMXG00000037957	eral1	79	33.056	Astyanax_mexicanus
FBgn0038106	CG7488	83	31.268	ENSBTAG00000015639	ERAL1	74	31.176	Bos_taurus
FBgn0038106	CG7488	83	31.193	ENSCJAG00000045605	ERAL1	74	31.193	Callithrix_jacchus
FBgn0038106	CG7488	83	31.642	ENSCAFG00000018813	ERAL1	74	31.642	Canis_familiaris
FBgn0038106	CG7488	83	31.642	ENSCAFG00020011718	ERAL1	74	31.642	Canis_lupus_dingo
FBgn0038106	CG7488	83	30.952	ENSCHIG00000021850	ERAL1	74	30.952	Capra_hircus
FBgn0038106	CG7488	80	31.429	ENSTSYG00000007492	ERAL1	72	31.429	Carlito_syrichta
FBgn0038106	CG7488	83	31.692	ENSCPOG00000009576	ERAL1	73	31.692	Cavia_porcellus
FBgn0038106	CG7488	83	31.077	ENSCCAG00000036226	-	74	31.077	Cebus_capucinus
FBgn0038106	CG7488	83	31.481	ENSCATG00000041378	ERAL1	74	31.385	Cercocebus_atys
FBgn0038106	CG7488	80	31.579	ENSCLAG00000004778	ERAL1	93	39.535	Chinchilla_lanigera
FBgn0038106	CG7488	83	31.692	ENSCSAG00000007105	ERAL1	74	31.692	Chlorocebus_sabaeus
FBgn0038106	CG7488	81	40.698	ENSCPBG00000020222	ERAL1	58	40.698	Chrysemys_picta_bellii
FBgn0038106	CG7488	71	33.684	ENSCING00000003676	-	80	33.684	Ciona_intestinalis
FBgn0038106	CG7488	83	31.173	ENSCANG00000028131	ERAL1	74	31.077	Colobus_angolensis_palliatus
FBgn0038106	CG7488	83	31.595	ENSCGRG00001016601	Eral1	74	31.595	Cricetulus_griseus_chok1gshd
FBgn0038106	CG7488	83	31.595	ENSCGRG00000002004	Eral1	74	31.595	Cricetulus_griseus_crigri
FBgn0038106	CG7488	83	32.641	ENSDARG00000059887	eral1	75	32.641	Danio_rerio
FBgn0038106	CG7488	83	31.595	ENSDNOG00000044554	ERAL1	74	31.498	Dasypus_novemcinctus
FBgn0038106	CG7488	83	32.099	ENSDORG00000011319	Eral1	75	32.000	Dipodomys_ordii
FBgn0038106	CG7488	51	35.468	ENSETEG00000011551	ERAL1	63	35.468	Echinops_telfairi
FBgn0038106	CG7488	82	30.233	ENSEBUG00000004405	eral1	75	30.233	Eptatretus_burgeri
FBgn0038106	CG7488	83	31.902	ENSEASG00005009864	ERAL1	74	31.902	Equus_asinus_asinus
FBgn0038106	CG7488	83	31.288	ENSECAG00000013325	ERAL1	74	31.193	Equus_caballus
FBgn0038106	CG7488	68	30.515	ENSEEUG00000005568	ERAL1	62	30.515	Erinaceus_europaeus
FBgn0038106	CG7488	83	30.659	ENSELUG00000021860	eral1	76	30.659	Esox_lucius
FBgn0038106	CG7488	83	30.887	ENSFCAG00000005232	ERAL1	74	30.887	Felis_catus
FBgn0038106	CG7488	83	31.389	ENSFALG00000006357	ERAL1	91	31.389	Ficedula_albicollis
FBgn0038106	CG7488	83	31.928	ENSFDAG00000001767	ERAL1	98	40.310	Fukomys_damarensis
FBgn0038106	CG7488	76	30.514	ENSFHEG00000012028	eral1	88	30.051	Fundulus_heteroclitus
FBgn0038106	CG7488	69	38.095	ENSGMOG00000014198	eral1	75	38.095	Gadus_morhua
FBgn0038106	CG7488	85	30.655	ENSGACG00000020251	eral1	95	36.496	Gasterosteus_aculeatus
FBgn0038106	CG7488	83	34.177	ENSGAGG00000023159	ERAL1	86	34.177	Gopherus_agassizii
FBgn0038106	CG7488	83	30.000	ENSHBUG00000022014	eral1	76	30.000	Haplochromis_burtoni
FBgn0038106	CG7488	83	32.308	ENSHGLG00000009773	ERAL1	73	32.308	Heterocephalus_glaber_female
FBgn0038106	CG7488	83	32.308	ENSHGLG00100018820	ERAL1	73	32.308	Heterocephalus_glaber_male
FBgn0038106	CG7488	83	31.105	ENSHCOG00000009314	eral1	80	31.105	Hippocampus_comes
FBgn0038106	CG7488	86	32.961	ENSIPUG00000013409	eral1	78	33.520	Ictalurus_punctatus
FBgn0038106	CG7488	86	31.548	ENSSTOG00000003459	ERAL1	75	31.548	Ictidomys_tridecemlineatus
FBgn0038106	CG7488	82	31.065	ENSKMAG00000012520	eral1	75	31.065	Kryptolebias_marmoratus
FBgn0038106	CG7488	86	36.216	ENSLACG00000012328	ERAL1	71	36.216	Latimeria_chalumnae
FBgn0038106	CG7488	90	32.405	ENSLOCG00000003302	eral1	88	31.220	Lepisosteus_oculatus
FBgn0038106	CG7488	83	30.887	ENSLAFG00000005438	ERAL1	74	30.887	Loxodonta_africana
FBgn0038106	CG7488	83	31.481	ENSMFAG00000000501	ERAL1	74	31.385	Macaca_fascicularis
FBgn0038106	CG7488	83	31.481	ENSMMUG00000002776	ERAL1	63	31.481	Macaca_mulatta
FBgn0038106	CG7488	83	31.288	ENSMNEG00000039112	ERAL1	74	31.288	Macaca_nemestrina
FBgn0038106	CG7488	83	31.481	ENSMLEG00000040246	ERAL1	74	31.385	Mandrillus_leucophaeus
FBgn0038106	CG7488	84	30.086	ENSMAMG00000006623	eral1	78	30.086	Mastacembelus_armatus
FBgn0038106	CG7488	83	30.000	ENSMZEG00005000255	eral1	76	30.000	Maylandia_zebra
FBgn0038106	CG7488	77	41.875	ENSMGAG00000012769	ERAL1	74	41.875	Meleagris_gallopavo
FBgn0038106	CG7488	51	34.783	ENSMAUG00000001516	Eral1	63	34.783	Mesocricetus_auratus
FBgn0038106	CG7488	83	31.385	ENSMICG00000005345	ERAL1	74	31.385	Microcebus_murinus
FBgn0038106	CG7488	83	31.692	ENSMOCG00000022786	Eral1	74	31.595	Microtus_ochrogaster
FBgn0038106	CG7488	83	32.308	ENSMODG00000019305	ERAL1	78	32.923	Monodelphis_domestica
FBgn0038106	CG7488	80	31.761	MGP_CAROLIEiJ_G0016788	Eral1	72	31.761	Mus_caroli
FBgn0038106	CG7488	80	31.761	ENSMUSG00000020832	Eral1	72	31.761	Mus_musculus
FBgn0038106	CG7488	80	31.447	MGP_SPRETEiJ_G0017631	Eral1	72	31.447	Mus_spretus
FBgn0038106	CG7488	84	31.157	ENSMPUG00000014146	ERAL1	75	31.065	Mustela_putorius_furo
FBgn0038106	CG7488	86	31.548	ENSMLUG00000013467	ERAL1	75	31.548	Myotis_lucifugus
FBgn0038106	CG7488	83	30.982	ENSNGAG00000019318	Eral1	75	30.539	Nannospalax_galili
FBgn0038106	CG7488	83	30.000	ENSNBRG00000015799	eral1	76	30.000	Neolamprologus_brichardi
FBgn0038106	CG7488	83	30.864	ENSNLEG00000002994	ERAL1	74	30.769	Nomascus_leucogenys
FBgn0038106	CG7488	84	33.645	ENSMEUG00000015582	ERAL1	81	33.540	Notamacropus_eugenii
FBgn0038106	CG7488	86	32.432	ENSOPRG00000014488	ERAL1	75	32.432	Ochotona_princeps
FBgn0038106	CG7488	62	31.008	ENSODEG00000011337	ERAL1	93	31.008	Octodon_degus
FBgn0038106	CG7488	86	31.953	ENSOCUG00000005572	ERAL1	75	31.953	Oryctolagus_cuniculus
FBgn0038106	CG7488	84	30.612	ENSORLG00000011440	eral1	78	30.612	Oryzias_latipes
FBgn0038106	CG7488	84	30.904	ENSORLG00020018272	eral1	78	30.904	Oryzias_latipes_hni
FBgn0038106	CG7488	84	30.612	ENSORLG00015001511	eral1	78	30.612	Oryzias_latipes_hsok
FBgn0038106	CG7488	84	30.838	ENSOMEG00000007662	eral1	77	30.838	Oryzias_melastigma
FBgn0038106	CG7488	83	32.923	ENSOGAG00000011082	ERAL1	74	32.923	Otolemur_garnettii
FBgn0038106	CG7488	83	30.655	ENSOARG00000004456	ERAL1	68	30.655	Ovis_aries
FBgn0038106	CG7488	51	32.524	ENSPPAG00000033864	-	80	32.524	Pan_paniscus
FBgn0038106	CG7488	83	30.887	ENSPPRG00000006097	ERAL1	74	30.887	Panthera_pardus
FBgn0038106	CG7488	83	30.887	ENSPTIG00000013961	ERAL1	74	30.887	Panthera_tigris_altaica
FBgn0038106	CG7488	83	30.769	ENSPTRG00000008938	ERAL1	74	30.769	Pan_troglodytes
FBgn0038106	CG7488	83	31.385	ENSPANG00000023400	ERAL1	74	31.385	Papio_anubis
FBgn0038106	CG7488	84	31.909	ENSPKIG00000016278	eral1	77	32.479	Paramormyrops_kingsleyae
FBgn0038106	CG7488	75	38.971	ENSPSIG00000007018	ERAL1	71	40.000	Pelodiscus_sinensis
FBgn0038106	CG7488	89	30.214	ENSPMGG00000007387	eral1	86	30.214	Periophthalmus_magnuspinnatus
FBgn0038106	CG7488	80	31.329	ENSPEMG00000000668	Eral1	72	31.329	Peromyscus_maniculatus_bairdii
FBgn0038106	CG7488	82	32.931	ENSPMAG00000008076	eral1	95	32.931	Petromyzon_marinus
FBgn0038106	CG7488	93	30.179	ENSPFOG00000018592	eral1	96	30.179	Poecilia_formosa
FBgn0038106	CG7488	93	30.179	ENSPLAG00000022753	eral1	86	30.179	Poecilia_latipinna
FBgn0038106	CG7488	93	30.179	ENSPMEG00000018207	eral1	86	30.179	Poecilia_mexicana
FBgn0038106	CG7488	93	30.179	ENSPREG00000006895	eral1	89	30.179	Poecilia_reticulata
FBgn0038106	CG7488	83	30.864	ENSPPYG00000008113	ERAL1	74	30.769	Pongo_abelii
FBgn0038106	CG7488	83	31.902	ENSPCAG00000003013	ERAL1	74	31.902	Procavia_capensis
FBgn0038106	CG7488	83	32.308	ENSPCOG00000023179	ERAL1	74	32.308	Propithecus_coquereli
FBgn0038106	CG7488	83	31.385	ENSPVAG00000001796	ERAL1	74	31.288	Pteropus_vampyrus
FBgn0038106	CG7488	86	33.611	ENSPNAG00000009960	eral1	79	33.611	Pygocentrus_nattereri
FBgn0038106	CG7488	83	31.077	ENSRBIG00000006150	ERAL1	74	31.077	Rhinopithecus_bieti
FBgn0038106	CG7488	83	30.769	ENSRROG00000026778	ERAL1	74	30.769	Rhinopithecus_roxellana
FBgn0038106	CG7488	90	32.092	ENSSHAG00000014995	ERAL1	92	32.194	Sarcophilus_harrisii
FBgn0038106	CG7488	84	32.865	ENSSFOG00015015511	eral1	88	32.865	Scleropages_formosus
FBgn0038106	CG7488	84	30.946	ENSSMAG00000000305	eral1	78	30.946	Scophthalmus_maximus
FBgn0038106	CG7488	85	31.157	ENSSARG00000010129	ERAL1	75	31.157	Sorex_araneus
FBgn0038106	CG7488	85	32.831	ENSSPUG00000005676	ERAL1	88	32.831	Sphenodon_punctatus
FBgn0038106	CG7488	83	33.025	ENSSSCG00000017776	ERAL1	74	32.923	Sus_scrofa
FBgn0038106	CG7488	73	32.692	ENSTRUG00000000660	eral1	67	32.692	Takifugu_rubripes
FBgn0038106	CG7488	65	33.460	ENSTNIG00000008531	eral1	94	40.816	Tetraodon_nigroviridis
FBgn0038106	CG7488	83	31.692	ENSTTRG00000004107	ERAL1	74	31.692	Tursiops_truncatus
FBgn0038106	CG7488	80	30.915	ENSUAMG00000015904	ERAL1	72	30.915	Ursus_americanus
FBgn0038106	CG7488	80	30.599	ENSUMAG00000011679	ERAL1	72	30.599	Ursus_maritimus
FBgn0038106	CG7488	66	32.567	ENSVPAG00000006626	ERAL1	70	32.567	Vicugna_pacos
FBgn0038106	CG7488	83	31.940	ENSVVUG00000017651	ERAL1	74	31.940	Vulpes_vulpes
FBgn0038106	CG7488	85	34.375	ENSXETG00000019633	eral1	92	34.375	Xenopus_tropicalis
FBgn0038106	CG7488	93	30.256	ENSXCOG00000005705	eral1	89	30.479	Xiphophorus_couchianus
FBgn0038106	CG7488	89	30.504	ENSXMAG00000005455	eral1	87	30.479	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0005525	GTP binding	-	IEA	Function
GO:0005759	mitochondrial matrix	21873635.	IBA	Component
GO:0019843	rRNA binding	21873635.	IBA	Function
GO:0043024	ribosomal small subunit binding	21873635.	IBA	Function