EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038168 (Gene tree)
Gene ID: 41674
Gene Symbol: omd
Alias: -
Full Name: oocyte maintenance defects
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 7771 bases
Position: chr3R:13679440-13687210
Accession: FBgn0038168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082313	INTS5_C	PF14838.6	2.9e-106	1	2
FBpp0082313	INTS5_C	PF14838.6	2.9e-106	2	2
FBpp0306597	INTS5_C	PF14838.6	2.9e-106	1	2
FBpp0306597	INTS5_C	PF14838.6	2.9e-106	2	2
FBpp0306598	INTS5_C	PF14838.6	2.9e-106	1	2
FBpp0306598	INTS5_C	PF14838.6	2.9e-106	2	2
FBpp0082313	INTS5_N	PF14837.6	1.6e-60	1	1
FBpp0306597	INTS5_N	PF14837.6	1.6e-60	1	1
FBpp0306598	INTS5_N	PF14837.6	1.6e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082848	-	3350	-	FBpp0082313	994 (aa)	-	Q9VFS6
FBtr0334531	-	3186	-	FBpp0306598	994 (aa)	-	Q9VFS6
FBtr0334530	-	3334	-	FBpp0306597	994 (aa)	-	Q9VFS6

Gene Model

Click here to download FBgn0038168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038168	omd	51	33.475	ENSG00000185085	INTS5	64	30.211	Homo_sapiens
FBgn0038168	omd	60	30.211	ENSAMEG00000006517	INTS5	64	30.211	Ailuropoda_melanoleuca
FBgn0038168	omd	54	31.970	ENSATEG00000014158	ints5	57	31.970	Anabas_testudineus
FBgn0038168	omd	60	30.514	ENSANAG00000028879	INTS5	64	30.514	Aotus_nancymaae
FBgn0038168	omd	60	30.793	ENSBTAG00000010455	INTS5	64	30.793	Bos_taurus
FBgn0038168	omd	51	33.475	ENSCJAG00000018821	INTS5	64	30.514	Callithrix_jacchus
FBgn0038168	omd	60	30.514	ENSCAFG00000015724	INTS5	64	30.514	Canis_familiaris
FBgn0038168	omd	60	30.514	ENSCAFG00020013093	INTS5	64	30.514	Canis_lupus_dingo
FBgn0038168	omd	60	30.793	ENSCHIG00000013982	INTS5	64	30.793	Capra_hircus
FBgn0038168	omd	51	33.906	ENSTSYG00000003094	INTS5	64	30.448	Carlito_syrichta
FBgn0038168	omd	60	30.793	ENSCPOG00000003669	INTS5	64	30.793	Cavia_porcellus
FBgn0038168	omd	60	30.514	ENSCCAG00000030851	INTS5	64	30.514	Cebus_capucinus
FBgn0038168	omd	60	30.211	ENSCATG00000032127	INTS5	64	30.211	Cercocebus_atys
FBgn0038168	omd	60	30.211	ENSCSAG00000006644	INTS5	64	30.211	Chlorocebus_sabaeus
FBgn0038168	omd	61	32.164	ENSCPBG00000017934	INTS5	64	32.727	Chrysemys_picta_bellii
FBgn0038168	omd	60	30.211	ENSCANG00000042874	INTS5	64	30.211	Colobus_angolensis_palliatus
FBgn0038168	omd	60	30.514	ENSDNOG00000047221	INTS5	64	30.514	Dasypus_novemcinctus
FBgn0038168	omd	50	31.231	ENSDORG00000025017	Ints5	64	31.231	Dipodomys_ordii
FBgn0038168	omd	60	31.098	ENSEASG00005011174	INTS5	61	31.098	Equus_asinus_asinus
FBgn0038168	omd	60	31.098	ENSECAG00000017300	INTS5	61	31.098	Equus_caballus
FBgn0038168	omd	54	30.545	ENSELUG00000007756	ints5	55	31.159	Esox_lucius
FBgn0038168	omd	60	30.211	ENSFCAG00000022488	INTS5	64	30.211	Felis_catus
FBgn0038168	omd	53	31.559	ENSFDAG00000017003	INTS5	67	31.559	Fukomys_damarensis
FBgn0038168	omd	54	31.159	ENSGMOG00000012169	ints5	57	31.522	Gadus_morhua
FBgn0038168	omd	54	31.086	ENSGAFG00000000551	ints5	57	32.584	Gambusia_affinis
FBgn0038168	omd	51	33.475	ENSGGOG00000026126	INTS5	64	30.211	Gorilla_gorilla
FBgn0038168	omd	60	30.655	ENSJJAG00000013000	Ints5	64	30.655	Jaculus_jaculus
FBgn0038168	omd	54	31.618	ENSKMAG00000004553	ints5	57	31.618	Kryptolebias_marmoratus
FBgn0038168	omd	60	30.211	ENSMFAG00000031212	INTS5	64	30.211	Macaca_fascicularis
FBgn0038168	omd	60	30.211	ENSMNEG00000009187	INTS5	64	30.211	Macaca_nemestrina
FBgn0038168	omd	60	30.211	ENSMLEG00000036338	INTS5	64	30.211	Mandrillus_leucophaeus
FBgn0038168	omd	51	31.970	ENSMAMG00000021695	ints5	57	31.970	Mastacembelus_armatus
FBgn0038168	omd	60	30.793	ENSMOCG00000017768	Ints5	64	30.793	Microtus_ochrogaster
FBgn0038168	omd	51	30.483	ENSMMOG00000002978	ints5	56	30.483	Mola_mola
FBgn0038168	omd	55	30.769	ENSMODG00000007879	INTS5	59	30.769	Monodelphis_domestica
FBgn0038168	omd	54	31.365	ENSMALG00000012484	ints5	56	32.103	Monopterus_albus
FBgn0038168	omd	60	30.183	MGP_CAROLIEiJ_G0022664	Ints5	64	30.183	Mus_caroli
FBgn0038168	omd	60	30.183	ENSMUSG00000071652	Ints5	64	30.183	Mus_musculus
FBgn0038168	omd	60	30.699	ENSMPUG00000013741	INTS5	64	30.699	Mustela_putorius_furo
FBgn0038168	omd	54	30.189	ENSODEG00000003038	INTS5	64	32.024	Octodon_degus
FBgn0038168	omd	60	31.003	ENSOCUG00000017276	INTS5	64	30.091	Oryctolagus_cuniculus
FBgn0038168	omd	50	31.203	ENSORLG00000002659	ints5	57	30.996	Oryzias_latipes
FBgn0038168	omd	51	30.996	ENSORLG00020018655	ints5	57	30.996	Oryzias_latipes_hni
FBgn0038168	omd	50	31.579	ENSORLG00015017372	ints5	57	31.365	Oryzias_latipes_hsok
FBgn0038168	omd	50	31.818	ENSOMEG00000019077	ints5	56	31.818	Oryzias_melastigma
FBgn0038168	omd	60	30.793	ENSOARG00000016276	INTS5	64	30.793	Ovis_aries
FBgn0038168	omd	51	33.475	ENSPPAG00000028305	INTS5	64	30.211	Pan_paniscus
FBgn0038168	omd	60	30.211	ENSPPRG00000011031	INTS5	64	30.211	Panthera_pardus
FBgn0038168	omd	60	30.462	ENSPTIG00000014269	INTS5	64	30.699	Panthera_tigris_altaica
FBgn0038168	omd	51	33.475	ENSPTRG00000003777	INTS5	64	30.211	Pan_troglodytes
FBgn0038168	omd	60	30.211	ENSPANG00000005282	INTS5	64	30.211	Papio_anubis
FBgn0038168	omd	60	30.488	ENSPEMG00000004838	Ints5	64	30.488	Peromyscus_maniculatus_bairdii
FBgn0038168	omd	63	30.508	ENSPMAG00000007000	ints5	69	30.168	Petromyzon_marinus
FBgn0038168	omd	54	31.086	ENSPFOG00000010213	ints5	60	32.584	Poecilia_formosa
FBgn0038168	omd	54	31.461	ENSPREG00000015632	ints5	53	32.584	Poecilia_reticulata
FBgn0038168	omd	51	33.898	ENSPPYG00000003157	INTS5	64	30.514	Pongo_abelii
FBgn0038168	omd	50	30.816	ENSPVAG00000003463	INTS5	64	30.816	Pteropus_vampyrus
FBgn0038168	omd	54	30.224	ENSPNYG00000015255	ints5	57	30.597	Pundamilia_nyererei
FBgn0038168	omd	60	30.211	ENSRBIG00000045006	INTS5	64	30.211	Rhinopithecus_bieti
FBgn0038168	omd	60	30.211	ENSRROG00000042424	INTS5	64	30.211	Rhinopithecus_roxellana
FBgn0038168	omd	60	30.514	ENSSBOG00000033783	INTS5	64	30.514	Saimiri_boliviensis_boliviensis
FBgn0038168	omd	51	30.769	ENSSMAG00000018037	ints5	57	30.769	Scophthalmus_maximus
FBgn0038168	omd	60	30.488	ENSSSCG00000028275	INTS5	63	30.488	Sus_scrofa
FBgn0038168	omd	52	33.205	ENSTBEG00000014202	INTS5	58	33.205	Tupaia_belangeri
FBgn0038168	omd	60	30.514	ENSUAMG00000025981	INTS5	64	30.514	Ursus_americanus
FBgn0038168	omd	60	30.514	ENSUMAG00000014386	INTS5	64	30.514	Ursus_maritimus
FBgn0038168	omd	60	30.514	ENSVVUG00000029860	INTS5	64	30.514	Vulpes_vulpes
FBgn0038168	omd	54	31.227	ENSXCOG00000001745	ints5	57	32.714	Xiphophorus_couchianus
FBgn0038168	omd	54	31.599	ENSXMAG00000003060	ints5	57	33.086	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0032039	integrator complex	21078872.	ISS	Component
GO:0034472	snRNA 3'-end processing	21078872.	IDA	Process