EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038235 (Gene tree)
Gene ID: 41758
Gene Symbol: CG8461
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 999 bases
Position: chr3R:14512639-14513637
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082445	RRP36	PF06102.12	4.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082986	-	883	-	FBpp0082445	244 (aa)	-	Q9VFJ1

Gene Model

Click here to download FBgn0038235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038235	CG8461	92	35.043	ENSG00000124541	RRP36	86	35.043	Homo_sapiens
FBgn0038235	CG8461	87	35.321	ENSAPOG00000022015	rrp36	81	31.489	Acanthochromis_polyacanthus
FBgn0038235	CG8461	93	34.894	ENSACIG00000020578	-	72	32.018	Amphilophus_citrinellus
FBgn0038235	CG8461	93	35.776	ENSAOCG00000013439	rrp36	67	37.885	Amphiprion_ocellaris
FBgn0038235	CG8461	93	35.776	ENSAPEG00000020996	rrp36	67	37.885	Amphiprion_percula
FBgn0038235	CG8461	93	32.035	ENSATEG00000016946	rrp36	63	34.071	Anabas_testudineus
FBgn0038235	CG8461	92	35.065	ENSANAG00000021773	RRP36	88	35.065	Aotus_nancymaae
FBgn0038235	CG8461	93	33.040	ENSACLG00000008408	rrp36	91	33.333	Astatotilapia_calliptera
FBgn0038235	CG8461	88	30.374	ENSACLG00000013982	RRP36	85	30.374	Astatotilapia_calliptera
FBgn0038235	CG8461	99	35.743	ENSBTAG00000053873	RRP36	91	35.897	Bos_taurus
FBgn0038235	CG8461	90	34.956	ENSCJAG00000004943	RRP36	86	34.956	Callithrix_jacchus
FBgn0038235	CG8461	92	34.052	ENSCAFG00020011057	RRP36	91	33.632	Canis_lupus_dingo
FBgn0038235	CG8461	82	35.096	ENSCHIG00000003210	-	88	35.096	Capra_hircus
FBgn0038235	CG8461	94	35.391	ENSCHIG00000016354	-	91	35.270	Capra_hircus
FBgn0038235	CG8461	61	36.184	ENSCHIG00000019781	-	67	36.000	Capra_hircus
FBgn0038235	CG8461	90	35.242	ENSTSYG00000037176	RRP36	85	35.242	Carlito_syrichta
FBgn0038235	CG8461	87	33.953	ENSCAPG00000010983	RRP36	90	33.953	Cavia_aperea
FBgn0038235	CG8461	87	34.884	ENSCPOG00000025932	RRP36	92	34.884	Cavia_porcellus
FBgn0038235	CG8461	92	35.498	ENSCCAG00000000048	RRP36	88	35.498	Cebus_capucinus
FBgn0038235	CG8461	92	34.615	ENSCATG00000041903	RRP36	87	35.470	Cercocebus_atys
FBgn0038235	CG8461	94	34.764	ENSCLAG00000013166	RRP36	97	34.783	Chinchilla_lanigera
FBgn0038235	CG8461	92	35.470	ENSCSAG00000011553	RRP36	87	35.470	Chlorocebus_sabaeus
FBgn0038235	CG8461	88	33.641	ENSCPBG00000003555	RRP36	57	33.641	Chrysemys_picta_bellii
FBgn0038235	CG8461	55	37.410	ENSCING00000012193	-	68	31.282	Ciona_intestinalis
FBgn0038235	CG8461	87	35.616	ENSCANG00000035127	RRP36	83	35.616	Colobus_angolensis_palliatus
FBgn0038235	CG8461	89	33.784	ENSCGRG00001021461	Rrp36	93	33.484	Cricetulus_griseus_chok1gshd
FBgn0038235	CG8461	89	33.784	ENSCGRG00000006286	Rrp36	93	33.484	Cricetulus_griseus_crigri
FBgn0038235	CG8461	98	32.645	ENSCSEG00000001039	RRP36	66	32.743	Cynoglossus_semilaevis
FBgn0038235	CG8461	87	31.364	ENSCVAG00000017798	rrp36	92	30.275	Cyprinodon_variegatus
FBgn0038235	CG8461	98	33.333	ENSDARG00000032516	rrp36	66	34.685	Danio_rerio
FBgn0038235	CG8461	87	31.651	ENSDORG00000012186	Rrp36	90	31.651	Dipodomys_ordii
FBgn0038235	CG8461	87	33.333	ENSEASG00005003169	RRP36	92	34.703	Equus_asinus_asinus
FBgn0038235	CG8461	87	33.333	ENSECAG00000040238	RRP36	92	34.703	Equus_caballus
FBgn0038235	CG8461	93	36.596	ENSELUG00000016840	rrp36	61	37.118	Esox_lucius
FBgn0038235	CG8461	97	33.750	ENSFCAG00000043818	RRP36	87	34.375	Felis_catus
FBgn0038235	CG8461	86	34.272	ENSFDAG00000010380	RRP36	96	34.272	Fukomys_damarensis
FBgn0038235	CG8461	91	33.628	ENSGAFG00000017817	rrp36	61	33.628	Gambusia_affinis
FBgn0038235	CG8461	96	33.740	ENSGACG00000019603	RRP36	66	34.081	Gasterosteus_aculeatus
FBgn0038235	CG8461	87	35.616	ENSGGOG00000037384	RRP36	87	35.065	Gorilla_gorilla
FBgn0038235	CG8461	93	35.345	ENSHBUG00000008974	RRP36	67	35.683	Haplochromis_burtoni
FBgn0038235	CG8461	86	33.641	ENSHGLG00000018082	RRP36	81	35.211	Heterocephalus_glaber_female
FBgn0038235	CG8461	86	33.641	ENSHGLG00100019303	RRP36	81	35.211	Heterocephalus_glaber_male
FBgn0038235	CG8461	57	31.884	ENSHCOG00000010303	rrp36	51	34.043	Hippocampus_comes
FBgn0038235	CG8461	94	32.773	ENSIPUG00000016548	rrp36	73	32.618	Ictalurus_punctatus
FBgn0038235	CG8461	87	35.160	ENSSTOG00000009511	RRP36	95	34.335	Ictidomys_tridecemlineatus
FBgn0038235	CG8461	89	34.081	ENSJJAG00000023363	Rrp36	95	34.081	Jaculus_jaculus
FBgn0038235	CG8461	91	35.242	ENSKMAG00000006968	rrp36	62	35.242	Kryptolebias_marmoratus
FBgn0038235	CG8461	93	30.769	ENSLBEG00000017728	-	66	30.980	Labrus_bergylta
FBgn0038235	CG8461	98	34.940	ENSLACG00000001888	rrp36	70	36.325	Latimeria_chalumnae
FBgn0038235	CG8461	91	38.053	ENSLOCG00000015862	RRP36	61	38.053	Lepisosteus_oculatus
FBgn0038235	CG8461	87	33.482	ENSLAFG00000032704	RRP36	98	33.482	Loxodonta_africana
FBgn0038235	CG8461	92	35.470	ENSMFAG00000003547	RRP36	87	35.470	Macaca_fascicularis
FBgn0038235	CG8461	92	35.470	ENSMNEG00000044747	RRP36	87	35.470	Macaca_nemestrina
FBgn0038235	CG8461	92	34.615	ENSMLEG00000034272	RRP36	87	35.470	Mandrillus_leucophaeus
FBgn0038235	CG8461	91	34.632	ENSMAMG00000019157	-	59	34.335	Mastacembelus_armatus
FBgn0038235	CG8461	93	35.345	ENSMZEG00005015204	RRP36	66	35.683	Maylandia_zebra
FBgn0038235	CG8461	91	34.667	ENSMAUG00000003648	Rrp36	96	34.222	Mesocricetus_auratus
FBgn0038235	CG8461	99	33.852	ENSMICG00000045230	RRP36	88	34.914	Microcebus_murinus
FBgn0038235	CG8461	90	34.081	ENSMOCG00000002009	Rrp36	89	34.081	Microtus_ochrogaster
FBgn0038235	CG8461	98	31.276	ENSMMOG00000018637	-	65	32.000	Mola_mola
FBgn0038235	CG8461	61	34.437	ENSMODG00000029304	-	78	33.129	Monodelphis_domestica
FBgn0038235	CG8461	93	34.914	ENSMALG00000008142	-	69	35.242	Monopterus_albus
FBgn0038235	CG8461	99	32.258	MGP_CAROLIEiJ_G0021680	Rrp36	86	33.937	Mus_caroli
FBgn0038235	CG8461	99	32.661	ENSMUSG00000023971	Rrp36	96	33.772	Mus_musculus
FBgn0038235	CG8461	89	35.135	MGP_PahariEiJ_G0020671	Rrp36	93	35.135	Mus_pahari
FBgn0038235	CG8461	95	34.177	MGP_SPRETEiJ_G0022592	Rrp36	89	34.211	Mus_spretus
FBgn0038235	CG8461	87	34.247	ENSNLEG00000033289	RRP36	97	34.247	Nomascus_leucogenys
FBgn0038235	CG8461	81	33.495	ENSOPRG00000002274	RRP36	80	33.495	Ochotona_princeps
FBgn0038235	CG8461	87	32.870	ENSODEG00000015915	RRP36	92	32.870	Octodon_degus
FBgn0038235	CG8461	93	35.345	ENSONIG00000015983	rrp36	69	35.683	Oreochromis_niloticus
FBgn0038235	CG8461	91	36.726	ENSORLG00000029500	rrp36	63	37.168	Oryzias_latipes
FBgn0038235	CG8461	91	37.611	ENSORLG00020017452	-	64	37.611	Oryzias_latipes_hni
FBgn0038235	CG8461	91	37.719	ENSORLG00015016898	rrp36	63	37.719	Oryzias_latipes_hsok
FBgn0038235	CG8461	93	34.764	ENSOMEG00000008623	RRP36	65	35.965	Oryzias_melastigma
FBgn0038235	CG8461	93	32.627	ENSOGAG00000012699	RRP36	97	32.627	Otolemur_garnettii
FBgn0038235	CG8461	96	34.177	ENSPPRG00000014610	RRP36	87	33.929	Panthera_pardus
FBgn0038235	CG8461	96	33.333	ENSPTIG00000010853	RRP36	87	33.929	Panthera_tigris_altaica
FBgn0038235	CG8461	92	35.043	ENSPTRG00000018184	RRP36	86	35.043	Pan_troglodytes
FBgn0038235	CG8461	92	35.470	ENSPANG00000025140	RRP36	87	35.470	Papio_anubis
FBgn0038235	CG8461	97	36.032	ENSPKIG00000004303	rrp36	64	36.681	Paramormyrops_kingsleyae
FBgn0038235	CG8461	89	33.945	ENSPMGG00000016870	rrp36	67	34.404	Periophthalmus_magnuspinnatus
FBgn0038235	CG8461	92	34.361	ENSPEMG00000007015	Rrp36	96	34.361	Peromyscus_maniculatus_bairdii
FBgn0038235	CG8461	91	33.333	ENSPCIG00000009179	RRP36	88	33.333	Phascolarctos_cinereus
FBgn0038235	CG8461	91	32.743	ENSPFOG00000011959	rrp36	56	32.444	Poecilia_formosa
FBgn0038235	CG8461	91	32.743	ENSPLAG00000023901	rrp36	61	32.444	Poecilia_latipinna
FBgn0038235	CG8461	91	33.186	ENSPMEG00000024099	rrp36	60	32.889	Poecilia_mexicana
FBgn0038235	CG8461	91	32.444	ENSPREG00000022787	rrp36	61	32.444	Poecilia_reticulata
FBgn0038235	CG8461	87	35.160	ENSPPYG00000016628	RRP36	81	36.073	Pongo_abelii
FBgn0038235	CG8461	99	33.600	ENSPCOG00000018401	RRP36	91	34.188	Propithecus_coquereli
FBgn0038235	CG8461	90	33.906	ENSPVAG00000008714	RRP36	88	33.906	Pteropus_vampyrus
FBgn0038235	CG8461	93	35.345	ENSPNYG00000018030	RRP36	67	35.683	Pundamilia_nyererei
FBgn0038235	CG8461	95	33.610	ENSPNAG00000027207	rrp36	60	34.375	Pygocentrus_nattereri
FBgn0038235	CG8461	89	35.135	ENSRNOG00000017836	Rrp36	86	35.135	Rattus_norvegicus
FBgn0038235	CG8461	94	35.000	ENSRBIG00000040019	RRP36	81	35.616	Rhinopithecus_bieti
FBgn0038235	CG8461	94	35.000	ENSRROG00000040721	RRP36	81	35.616	Rhinopithecus_roxellana
FBgn0038235	CG8461	90	34.649	ENSSBOG00000030228	RRP36	88	34.649	Saimiri_boliviensis_boliviensis
FBgn0038235	CG8461	91	36.444	ENSSFOG00015023058	rrp36	64	37.611	Scleropages_formosus
FBgn0038235	CG8461	93	35.593	ENSSMAG00000020911	-	59	35.931	Scophthalmus_maximus
FBgn0038235	CG8461	93	34.914	ENSSDUG00000018924	rrp36	60	35.242	Seriola_dumerili
FBgn0038235	CG8461	86	36.530	ENSSLDG00000019741	RRP36	96	36.530	Seriola_lalandi_dorsalis
FBgn0038235	CG8461	87	33.796	ENSSARG00000000873	RRP36	97	33.796	Sorex_araneus
FBgn0038235	CG8461	97	30.962	ENSSPUG00000000213	RRP36	60	30.804	Sphenodon_punctatus
FBgn0038235	CG8461	87	36.364	ENSSPAG00000017154	rrp36	79	30.131	Stegastes_partitus
FBgn0038235	CG8461	93	31.304	ENSSSCG00000037862	-	91	31.308	Sus_scrofa
FBgn0038235	CG8461	99	35.600	ENSSSCG00000001656	RRP36	90	35.470	Sus_scrofa
FBgn0038235	CG8461	91	31.081	ENSTRUG00000021893	rrp36	66	31.081	Takifugu_rubripes
FBgn0038235	CG8461	93	33.478	ENSTNIG00000004741	rrp36	87	33.929	Tetraodon_nigroviridis
FBgn0038235	CG8461	87	35.616	ENSTTRG00000007001	RRP36	85	36.073	Tursiops_truncatus
FBgn0038235	CG8461	99	31.837	ENSUAMG00000015865	RRP36	91	32.609	Ursus_americanus
FBgn0038235	CG8461	67	31.928	ENSUMAG00000008726	RRP36	98	31.928	Ursus_maritimus
FBgn0038235	CG8461	87	34.247	ENSVPAG00000008904	RRP36	97	33.790	Vicugna_pacos
FBgn0038235	CG8461	92	34.052	ENSVVUG00000027816	RRP36	91	33.632	Vulpes_vulpes
FBgn0038235	CG8461	91	32.889	ENSXCOG00000011238	rrp36	89	30.374	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0000469	cleavage involved in rRNA processing	-	IEA	Process
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0030686	90S preribosome	21873635.	IBA	Component