EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0038277 (Gene tree)
Gene ID
41807
Gene Symbol
RpS5b
Alias
-
Full Name
Ribosomal protein S5b
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Minus strand
Length
1132 bases
Position
chr3R:14900432-14901563
Accession
FBgn0038277
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0082465Ribosomal_S7PF00177.216.6e-3611
FBpp0300392Ribosomal_S7PF00177.215.6e-1811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27197210The mRNA-bound proteome of the early fly embryoIC & embryos2016 Apr 28Wessels HHDOI: 10.1101/gr.200386.115
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0308031-951-FBpp0300392180 (aa)-A0A0B4K683
FBtr0083006-874-FBpp0082465230 (aa)-Q9VFE4
Gene Model
Click here to download FBgn0038277's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0038277's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0038277RpS5b10080.000FBgn0002590RpS5a9980.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0038277RpS5b8786.070ENSG00000083845RPS59690.476Homo_sapiens
FBgn0038277RpS5b8786.500ENSAPOG00000023785rps59886.500Acanthochromis_polyacanthus
FBgn0038277RpS5b8786.070ENSAMEG00000007431RPS59886.070Ailuropoda_melanoleuca
FBgn0038277RpS5b9084.135ENSACIG00000007319rps59984.135Amphilophus_citrinellus
FBgn0038277RpS5b7883.889ENSAOCG00000021297rps57883.889Amphiprion_ocellaris
FBgn0038277RpS5b8686.802ENSAOCG00000010721RPS59786.802Amphiprion_ocellaris
FBgn0038277RpS5b8970.531ENSAPEG00000010045rps59970.531Amphiprion_percula
FBgn0038277RpS5b8786.500ENSATEG00000007911rps59886.500Anabas_testudineus
FBgn0038277RpS5b8786.500ENSACAG00000010996RPS59886.500Anolis_carolinensis
FBgn0038277RpS5b8763.184ENSANAG00000035789-9764.607Aotus_nancymaae
FBgn0038277RpS5b8786.070ENSANAG00000020231-9690.476Aotus_nancymaae
FBgn0038277RpS5b8784.080ENSANAG00000023153-9284.080Aotus_nancymaae
FBgn0038277RpS5b9084.135ENSACLG00000007312rps59984.135Astatotilapia_calliptera
FBgn0038277RpS5b8786.000ENSAMXG00000029764rps59886.000Astyanax_mexicanus
FBgn0038277RpS5b8786.070ENSBTAG00000015989RPS59886.070Bos_taurus
FBgn0038277RpS5b9175.598WBGene00004474rps-59975.598Caenorhabditis_elegans
FBgn0038277RpS5b8786.070ENSCJAG00000000304RPS59690.476Callithrix_jacchus
FBgn0038277RpS5b8786.070ENSCAFG00000002366RPS59886.070Canis_familiaris
FBgn0038277RpS5b8782.775ENSCAFG00020014863-9690.476Canis_lupus_dingo
FBgn0038277RpS5b6991.429ENSCAFG00020014527-10091.429Canis_lupus_dingo
FBgn0038277RpS5b8786.070ENSCHIG00000019536RPS59886.070Capra_hircus
FBgn0038277RpS5b8786.070ENSTSYG00000000076-9690.476Carlito_syrichta
FBgn0038277RpS5b7786.932ENSCAPG00000017186RPS58686.932Cavia_aperea
FBgn0038277RpS5b8786.070ENSCPOG00000023995RPS59886.070Cavia_porcellus
FBgn0038277RpS5b8773.134ENSCCAG00000036875-9273.134Cebus_capucinus
FBgn0038277RpS5b8461.140ENSCCAG00000021605-9461.140Cebus_capucinus
FBgn0038277RpS5b8786.070ENSCCAG00000020744-9690.476Cebus_capucinus
FBgn0038277RpS5b8786.070ENSCATG00000030198RPS59690.476Cercocebus_atys
FBgn0038277RpS5b8476.804ENSCATG00000040451-8976.804Cercocebus_atys
FBgn0038277RpS5b8786.070ENSCLAG00000000313RPS59886.070Chinchilla_lanigera
FBgn0038277RpS5b7662.044ENSCSAG00000015430-9362.000Chlorocebus_sabaeus
FBgn0038277RpS5b8467.179ENSCSAG00000009927-9467.179Chlorocebus_sabaeus
FBgn0038277RpS5b8786.070ENSCSAG00000001598RPS59886.070Chlorocebus_sabaeus
FBgn0038277RpS5b8786.500ENSCPBG00000013028RPS59886.500Chrysemys_picta_bellii
FBgn0038277RpS5b9176.667ENSCING00000002448-9976.667Ciona_intestinalis
FBgn0038277RpS5b9174.762ENSCSAVG00000005966-9974.762Ciona_savignyi
FBgn0038277RpS5b8762.312ENSCANG00000003782-8962.312Colobus_angolensis_palliatus
FBgn0038277RpS5b8786.070ENSCANG00000032591RPS59690.476Colobus_angolensis_palliatus
FBgn0038277RpS5b8462.564ENSCANG00000028788-9462.564Colobus_angolensis_palliatus
FBgn0038277RpS5b8786.070ENSCGRG00001014197Rps59886.070Cricetulus_griseus_chok1gshd
FBgn0038277RpS5b8473.196ENSCGRG00000011329Rps59573.196Cricetulus_griseus_crigri
FBgn0038277RpS5b8786.500ENSCSEG00000011153rps59886.500Cynoglossus_semilaevis
FBgn0038277RpS5b5777.451ENSCVAG00000023171RPS56377.451Cyprinodon_variegatus
FBgn0038277RpS5b9182.775ENSDARG00000043453rps59982.775Danio_rerio
FBgn0038277RpS5b8764.677ENSDNOG00000037158-8764.677Dasypus_novemcinctus
FBgn0038277RpS5b8785.572ENSDNOG00000047505-9885.572Dasypus_novemcinctus
FBgn0038277RpS5b8487.629ENSDORG00000002165-9587.629Dipodomys_ordii
FBgn0038277RpS5b8165.775ENSDORG00000023488-9365.445Dipodomys_ordii
FBgn0038277RpS5b8182.192ENSETEG00000013543-9870.647Echinops_telfairi
FBgn0038277RpS5b7982.517ENSEBUG00000008049-6879.167Eptatretus_burgeri
FBgn0038277RpS5b8786.070ENSEASG00005020216RPS59886.070Equus_asinus_asinus
FBgn0038277RpS5b7983.099ENSECAG00000016340RPS55185.143Equus_caballus
FBgn0038277RpS5b8787.000ENSELUG00000007527RS59887.000Esox_lucius
FBgn0038277RpS5b8687.817ENSELUG00000007427rs59887.817Esox_lucius
FBgn0038277RpS5b8786.070ENSFCAG00000027978RPS59690.476Felis_catus
FBgn0038277RpS5b8786.070ENSFDAG00000010753RPS59886.070Fukomys_damarensis
FBgn0038277RpS5b8786.500ENSFHEG00000009134rps59886.500Fundulus_heteroclitus
FBgn0038277RpS5b8787.000ENSGMOG00000015218rps59787.000Gadus_morhua
FBgn0038277RpS5b9084.135ENSGAFG00000002691rps59984.135Gambusia_affinis
FBgn0038277RpS5b8786.500ENSGACG00000002835rps59886.500Gasterosteus_aculeatus
FBgn0038277RpS5b8786.500ENSGAGG00000008180RPS59690.476Gopherus_agassizii
FBgn0038277RpS5b8757.921ENSGGOG00000022062-9757.921Gorilla_gorilla
FBgn0038277RpS5b5073.034ENSGGOG00000022061-8673.034Gorilla_gorilla
FBgn0038277RpS5b8786.070ENSGGOG00000004258RPS59690.476Gorilla_gorilla
FBgn0038277RpS5b8277.128ENSGGOG00000041414-8777.128Gorilla_gorilla
FBgn0038277RpS5b8280.952ENSGGOG00000024360-8980.952Gorilla_gorilla
FBgn0038277RpS5b7675.862ENSGGOG00000025551-8676.271Gorilla_gorilla
FBgn0038277RpS5b8470.707ENSGGOG00000026021-10070.707Gorilla_gorilla
FBgn0038277RpS5b9084.135ENSHBUG00000009305rps59984.135Haplochromis_burtoni
FBgn0038277RpS5b8786.070ENSHGLG00000007229RPS59886.070Heterocephalus_glaber_female
FBgn0038277RpS5b8786.070ENSHGLG00100013944RPS59886.070Heterocephalus_glaber_male
FBgn0038277RpS5b8786.500ENSHCOG00000007396rps59886.500Hippocampus_comes
FBgn0038277RpS5b9084.135ENSIPUG00000004835rps59690.476Ictalurus_punctatus
FBgn0038277RpS5b8786.070ENSSTOG00000005935-9886.070Ictidomys_tridecemlineatus
FBgn0038277RpS5b8469.072ENSSTOG00000029731-9169.072Ictidomys_tridecemlineatus
FBgn0038277RpS5b8786.070ENSJJAG00000002076Rps59886.070Jaculus_jaculus
FBgn0038277RpS5b8786.500ENSKMAG00000012994rps59886.500Kryptolebias_marmoratus
FBgn0038277RpS5b8780.000ENSLBEG00000019288rps59780.000Labrus_bergylta
FBgn0038277RpS5b8786.500ENSLBEG00000007150RPS59886.500Labrus_bergylta
FBgn0038277RpS5b9084.135ENSLACG00000009935RPS59984.135Latimeria_chalumnae
FBgn0038277RpS5b7950.350ENSLOCG00000000731-9650.350Lepisosteus_oculatus
FBgn0038277RpS5b8786.070ENSLAFG00000008734RPS59886.070Loxodonta_africana
FBgn0038277RpS5b8786.070ENSMFAG00000002766RPS59690.476Macaca_fascicularis
FBgn0038277RpS5b8461.026ENSMFAG00000002785-9561.026Macaca_fascicularis
FBgn0038277RpS5b8762.189ENSMFAG00000042136-9063.131Macaca_fascicularis
FBgn0038277RpS5b8786.070ENSMMUG00000008729RPS59690.476Macaca_mulatta
FBgn0038277RpS5b8761.692ENSMMUG00000018997-9661.692Macaca_mulatta
FBgn0038277RpS5b8461.026ENSMMUG00000042835-9561.026Macaca_mulatta
FBgn0038277RpS5b8786.070ENSMNEG00000039816RPS59690.476Macaca_nemestrina
FBgn0038277RpS5b8478.866ENSMNEG00000042225-9278.866Macaca_nemestrina
FBgn0038277RpS5b8663.131ENSMNEG00000031381-8963.131Macaca_nemestrina
FBgn0038277RpS5b8461.026ENSMLEG00000040248-9461.026Mandrillus_leucophaeus
FBgn0038277RpS5b8786.070ENSMLEG00000028037RPS59690.476Mandrillus_leucophaeus
FBgn0038277RpS5b8762.687ENSMLEG00000031826-9063.636Mandrillus_leucophaeus
FBgn0038277RpS5b8470.103ENSMLEG00000035638-9570.103Mandrillus_leucophaeus
FBgn0038277RpS5b8786.500ENSMAMG00000002747rps59886.500Mastacembelus_armatus
FBgn0038277RpS5b9084.135ENSMZEG00005026435rps59984.135Maylandia_zebra
FBgn0038277RpS5b8786.070ENSMAUG00000010731Rps59886.070Mesocricetus_auratus
FBgn0038277RpS5b8786.070ENSMICG00000016512RPS59690.476Microcebus_murinus
FBgn0038277RpS5b8269.312ENSMOCG00000017884-10069.312Microtus_ochrogaster
FBgn0038277RpS5b8786.070ENSMOCG00000022992-9886.070Microtus_ochrogaster
FBgn0038277RpS5b8786.000ENSMMOG00000014650rps59886.000Mola_mola
FBgn0038277RpS5b8786.500ENSMALG00000009648rps59886.500Monopterus_albus
FBgn0038277RpS5b8487.629MGP_CAROLIEiJ_G0029192Rps59587.629Mus_caroli
FBgn0038277RpS5b8487.629ENSMUSG00000012848Rps59587.629Mus_musculus
FBgn0038277RpS5b8487.629MGP_PahariEiJ_G0021054Rps59587.629Mus_pahari
FBgn0038277RpS5b8487.629MGP_SPRETEiJ_G0030268Rps59587.629Mus_spretus
FBgn0038277RpS5b7391.124ENSMPUG00000008308RPS510091.124Mustela_putorius_furo
FBgn0038277RpS5b8784.158ENSMLUG00000012641RPS59884.158Myotis_lucifugus
FBgn0038277RpS5b8786.070ENSNGAG00000015766Rps59886.070Nannospalax_galili
FBgn0038277RpS5b9084.135ENSNBRG00000018402rps59984.135Neolamprologus_brichardi
FBgn0038277RpS5b8276.720ENSNLEG00000018478-9076.720Nomascus_leucogenys
FBgn0038277RpS5b8271.958ENSNLEG00000031782-8871.429Nomascus_leucogenys
FBgn0038277RpS5b7074.074ENSNLEG00000033263-9574.074Nomascus_leucogenys
FBgn0038277RpS5b8476.166ENSNLEG00000034160-9476.166Nomascus_leucogenys
FBgn0038277RpS5b8367.368ENSMEUG00000015400-9967.368Notamacropus_eugenii
FBgn0038277RpS5b8375.916ENSODEG00000018813-9475.916Octodon_degus
FBgn0038277RpS5b8686.802ENSODEG00000000899-9786.802Octodon_degus
FBgn0038277RpS5b9084.135ENSONIG00000019659rps59984.135Oreochromis_niloticus
FBgn0038277RpS5b7391.124ENSOANG00000011921RPS510091.124Ornithorhynchus_anatinus
FBgn0038277RpS5b8786.070ENSOCUG00000024505RPS59886.070Oryctolagus_cuniculus
FBgn0038277RpS5b8786.500ENSORLG00000022059rps59886.500Oryzias_latipes
FBgn0038277RpS5b8786.500ENSORLG00020008989rps59886.500Oryzias_latipes_hni
FBgn0038277RpS5b8786.500ENSORLG00015016306rps59886.500Oryzias_latipes_hsok
FBgn0038277RpS5b9084.135ENSOMEG00000008257rps59984.135Oryzias_melastigma
FBgn0038277RpS5b8786.070ENSOGAG00000013088RPS59886.070Otolemur_garnettii
FBgn0038277RpS5b8786.070ENSOARG00000003848RPS59886.070Ovis_aries
FBgn0038277RpS5b8786.070ENSPPAG00000039568RPS59690.476Pan_paniscus
FBgn0038277RpS5b8778.607ENSPPAG00000037203-7778.607Pan_paniscus
FBgn0038277RpS5b8759.901ENSPPAG00000037379-9759.901Pan_paniscus
FBgn0038277RpS5b5074.157ENSPPAG00000041919-8674.157Pan_paniscus
FBgn0038277RpS5b8469.697ENSPPAG00000029021-10069.697Pan_paniscus
FBgn0038277RpS5b8786.070ENSPPRG00000003031RPS59690.476Panthera_pardus
FBgn0038277RpS5b8786.070ENSPTIG00000019819RPS59690.476Panthera_tigris_altaica
FBgn0038277RpS5b8475.773ENSPTRG00000049193-9575.773Pan_troglodytes
FBgn0038277RpS5b5074.157ENSPTRG00000045716-8674.157Pan_troglodytes
FBgn0038277RpS5b8776.617ENSPTRG00000051033-7586.735Pan_troglodytes
FBgn0038277RpS5b8468.528ENSPTRG00000045137-9968.528Pan_troglodytes
FBgn0038277RpS5b8760.396ENSPTRG00000051381-9760.396Pan_troglodytes
FBgn0038277RpS5b8786.070ENSPTRG00000011591RPS59690.476Pan_troglodytes
FBgn0038277RpS5b7391.124ENSPANG00000014392RPS510082.990Papio_anubis
FBgn0038277RpS5b8763.184ENSPANG00000029789-9064.141Papio_anubis
FBgn0038277RpS5b8786.500ENSPKIG00000011575rps59886.500Paramormyrops_kingsleyae
FBgn0038277RpS5b9084.135ENSPMGG00000000854rps510086.432Periophthalmus_magnuspinnatus
FBgn0038277RpS5b8786.070ENSPEMG00000015167Rps59886.070Peromyscus_maniculatus_bairdii
FBgn0038277RpS5b8786.070ENSPCIG00000026774RPS59886.070Phascolarctos_cinereus
FBgn0038277RpS5b9084.135ENSPFOG00000002010rps59984.135Poecilia_formosa
FBgn0038277RpS5b9084.135ENSPLAG00000009866rps59984.135Poecilia_latipinna
FBgn0038277RpS5b9084.135ENSPMEG00000005285rps59984.135Poecilia_mexicana
FBgn0038277RpS5b9083.981ENSPREG00000001896rps58483.981Poecilia_reticulata
FBgn0038277RpS5b8785.572ENSPPYG00000010500RPS59885.572Pongo_abelii
FBgn0038277RpS5b8786.070ENSPCAG00000011034RPS59886.070Procavia_capensis
FBgn0038277RpS5b8786.070ENSPCOG00000016007RPS59690.476Propithecus_coquereli
FBgn0038277RpS5b8786.070ENSPVAG00000013966RPS59886.070Pteropus_vampyrus
FBgn0038277RpS5b9084.135ENSPNYG00000016183rps59984.135Pundamilia_nyererei
FBgn0038277RpS5b8786.500ENSPNAG00000014022rps59886.500Pygocentrus_nattereri
FBgn0038277RpS5b8786.070ENSRNOG00000019453Rps59886.070Rattus_norvegicus
FBgn0038277RpS5b9282.547ENSRBIG00000027783RPS59690.476Rhinopithecus_bieti
FBgn0038277RpS5b8560.606ENSRBIG00000031827-9660.606Rhinopithecus_bieti
FBgn0038277RpS5b9282.547ENSRROG00000036995RPS59690.476Rhinopithecus_roxellana
FBgn0038277RpS5b8561.111ENSRROG00000039369-9661.111Rhinopithecus_roxellana
FBgn0038277RpS5b9164.286YJR123WRPS59264.286Saccharomyces_cerevisiae
FBgn0038277RpS5b8786.070ENSSBOG00000030947-9690.476Saimiri_boliviensis_boliviensis
FBgn0038277RpS5b7872.626ENSSBOG00000033455-9577.143Saimiri_boliviensis_boliviensis
FBgn0038277RpS5b8786.070ENSSHAG00000000092RPS59886.070Sarcophilus_harrisii
FBgn0038277RpS5b8686.294ENSSFOG00015019773rps59886.294Scleropages_formosus
FBgn0038277RpS5b8786.500ENSSFOG00015016609rps59886.500Scleropages_formosus
FBgn0038277RpS5b8786.000ENSSMAG00000020321rps59886.000Scophthalmus_maximus
FBgn0038277RpS5b8786.500ENSSDUG00000019721rps59886.500Seriola_dumerili
FBgn0038277RpS5b7766.187ENSSLDG00000006453-9658.201Seriola_lalandi_dorsalis
FBgn0038277RpS5b8786.500ENSSLDG00000024207rps59886.500Seriola_lalandi_dorsalis
FBgn0038277RpS5b8786.070ENSSARG00000001506RPS59886.070Sorex_araneus
FBgn0038277RpS5b9083.173ENSSPUG00000014897RPS59690.476Sphenodon_punctatus
FBgn0038277RpS5b8770.500ENSSPAG00000005082rps59670.500Stegastes_partitus
FBgn0038277RpS5b8786.070ENSSSCG00000004002RPS59886.070Sus_scrofa
FBgn0038277RpS5b5778.431ENSTGUG00000015321-9578.431Taeniopygia_guttata
FBgn0038277RpS5b8488.144ENSTRUG00000023565rps59688.144Takifugu_rubripes
FBgn0038277RpS5b7784.892ENSTNIG00000001130rps59484.397Tetraodon_nigroviridis
FBgn0038277RpS5b8281.633ENSTBEG00000016955RPS59483.140Tupaia_belangeri
FBgn0038277RpS5b8776.119ENSTTRG00000001991RPS59876.119Tursiops_truncatus
FBgn0038277RpS5b8786.070ENSUAMG00000019475RPS59886.070Ursus_americanus
FBgn0038277RpS5b8786.070ENSUMAG00000003934RPS59886.070Ursus_maritimus
FBgn0038277RpS5b8182.192ENSVPAG00000000903RPS59782.192Vicugna_pacos
FBgn0038277RpS5b9084.058ENSVVUG00000002269RPS59584.058Vulpes_vulpes
FBgn0038277RpS5b8386.979ENSXETG00000020355rps59486.979Xenopus_tropicalis
FBgn0038277RpS5b9084.135ENSXCOG00000019549rps59984.135Xiphophorus_couchianus
FBgn0038277RpS5b9084.135ENSXMAG00000014201rps59984.135Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000028ribosomal small subunit assembly21873635.IBAProcess
GO:0002181cytoplasmic translation17927810.TASProcess
GO:0003729mRNA binding21873635.IBAFunction
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0003735structural constituent of ribosome17927810.TASFunction
GO:0006412translation21873635.IBAProcess
GO:0019843rRNA binding21873635.IBAFunction
GO:0022627cytosolic small ribosomal subunit21873635.IBAComponent
GO:0022627cytosolic small ribosomal subunit17927810.TASComponent

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