EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038319 (Gene tree)
Gene ID: 41859
Gene Symbol: mRpL9
Alias: -
Full Name: mitochondrial ribosomal protein L9
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 851 bases
Position: chr3R:15330738-15331588
Accession: FBgn0038319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082540	Ribosomal_L9_N	PF01281.19	3.7e-11	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083084	-	794	-	FBpp0082540	248 (aa)	-	Q9VF89

Gene Model

Click here to download FBgn0038319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038319's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038319	mRpL9	79	30.198	ENSAMXG00000041268	mrpl9	80	30.198	Astyanax_mexicanus
FBgn0038319	mRpL9	65	31.707	ENSBTAG00000000797	MRPL9	70	31.707	Bos_taurus
FBgn0038319	mRpL9	75	31.414	ENSCJAG00000007926	MRPL9	77	31.414	Callithrix_jacchus
FBgn0038319	mRpL9	83	31.068	ENSCHIG00000011797	MRPL9	75	31.068	Capra_hircus
FBgn0038319	mRpL9	73	31.351	ENSCCAG00000021688	MRPL9	78	31.351	Cebus_capucinus
FBgn0038319	mRpL9	75	30.000	ENSCGRG00001017649	Mrpl9	69	30.000	Cricetulus_griseus_chok1gshd
FBgn0038319	mRpL9	75	30.526	ENSFDAG00000008439	MRPL9	75	30.526	Fukomys_damarensis
FBgn0038319	mRpL9	80	31.373	ENSGMOG00000016956	mrpl9	83	31.373	Gadus_morhua
FBgn0038319	mRpL9	80	30.435	ENSKMAG00000010267	mrpl9	75	30.435	Kryptolebias_marmoratus
FBgn0038319	mRpL9	76	30.208	ENSMMUG00000009094	MRPL9	64	30.208	Macaca_mulatta
FBgn0038319	mRpL9	76	30.208	ENSMNEG00000020504	MRPL9	64	30.208	Macaca_nemestrina
FBgn0038319	mRpL9	76	30.208	ENSMICG00000010669	MRPL9	69	30.208	Microcebus_murinus
FBgn0038319	mRpL9	75	30.366	ENSNGAG00000010578	Mrpl9	69	30.366	Nannospalax_galili
FBgn0038319	mRpL9	83	30.332	ENSNLEG00000010275	MRPL9	76	30.332	Nomascus_leucogenys
FBgn0038319	mRpL9	79	30.457	ENSORLG00015009701	mrpl9	82	30.457	Oryzias_latipes_hsok
FBgn0038319	mRpL9	74	30.270	ENSPMGG00000021557	mrpl9	73	30.159	Periophthalmus_magnuspinnatus
FBgn0038319	mRpL9	75	30.208	ENSPEMG00000011374	Mrpl9	73	30.055	Peromyscus_maniculatus_bairdii
FBgn0038319	mRpL9	76	30.208	ENSPCOG00000006826	MRPL9	69	30.208	Propithecus_coquereli
FBgn0038319	mRpL9	81	30.000	ENSPNAG00000025239	mrpl9	86	30.000	Pygocentrus_nattereri
FBgn0038319	mRpL9	90	31.390	ENSSSCG00000028343	MRPL9	85	31.390	Sus_scrofa
FBgn0038319	mRpL9	75	30.526	ENSTBEG00000010836	MRPL9	68	30.526	Tupaia_belangeri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	11279069.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	11279069.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	11279069.	ISS	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process