EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038327 (Gene tree)
Gene ID: 41871
Gene Symbol: Trax
Alias: -
Full Name: Translin associated factor X
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1159 bases
Position: chr3R:15361692-15362850
Accession: FBgn0038327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082549	Translin	PF01997.16	5.1e-61	1	1
FBpp0312597	Translin	PF01997.16	5.1e-61	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083093	-	1077	-	FBpp0082549	298 (aa)	-	D0IQD7
FBtr0347564	-	1109	-	FBpp0312597	298 (aa)	-	Q9VF77

Gene Model

Click here to download FBgn0038327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038327's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038327	Trax	93	36.525	ENSG00000116918	TSNAX	92	36.525	Homo_sapiens
FBgn0038327	Trax	85	37.008	ENSAPOG00000011188	tsnax	83	37.008	Acanthochromis_polyacanthus
FBgn0038327	Trax	93	35.816	ENSAMEG00000002637	-	92	35.816	Ailuropoda_melanoleuca
FBgn0038327	Trax	85	37.402	ENSACIG00000005910	tsnax	83	37.402	Amphilophus_citrinellus
FBgn0038327	Trax	94	35.106	ENSAOCG00000012857	tsnax	93	35.106	Amphiprion_ocellaris
FBgn0038327	Trax	92	35.379	ENSAPEG00000024161	tsnax	90	36.863	Amphiprion_percula
FBgn0038327	Trax	92	35.740	ENSATEG00000014674	tsnax	90	35.740	Anabas_testudineus
FBgn0038327	Trax	91	37.132	ENSAPLG00000013433	-	88	37.132	Anas_platyrhynchos
FBgn0038327	Trax	93	36.396	ENSACAG00000002787	-	92	36.396	Anolis_carolinensis
FBgn0038327	Trax	93	36.879	ENSANAG00000023733	-	92	36.879	Aotus_nancymaae
FBgn0038327	Trax	68	32.020	ENSACLG00000023252	tsnax	77	32.020	Astatotilapia_calliptera
FBgn0038327	Trax	91	35.766	ENSAMXG00000024558	tsnax	90	35.766	Astyanax_mexicanus
FBgn0038327	Trax	93	35.816	ENSBTAG00000047434	TSNAX	97	35.772	Bos_taurus
FBgn0038327	Trax	93	36.879	ENSCJAG00000039956	-	92	36.879	Callithrix_jacchus
FBgn0038327	Trax	93	34.859	ENSCAFG00000030982	-	92	34.859	Canis_familiaris
FBgn0038327	Trax	93	34.859	ENSCAFG00020027186	-	92	34.859	Canis_lupus_dingo
FBgn0038327	Trax	93	35.816	ENSCHIG00000012051	-	92	35.816	Capra_hircus
FBgn0038327	Trax	82	38.776	ENSTSYG00000014070	-	91	38.776	Carlito_syrichta
FBgn0038327	Trax	93	36.170	ENSTSYG00000026820	-	92	36.170	Carlito_syrichta
FBgn0038327	Trax	82	39.095	ENSCAPG00000007224	-	88	39.095	Cavia_aperea
FBgn0038327	Trax	93	36.879	ENSCPOG00000036257	-	92	36.879	Cavia_porcellus
FBgn0038327	Trax	93	36.879	ENSCCAG00000025312	-	92	36.879	Cebus_capucinus
FBgn0038327	Trax	93	36.170	ENSCATG00000037048	TSNAX	92	36.170	Cercocebus_atys
FBgn0038327	Trax	93	36.879	ENSCLAG00000004894	-	92	36.879	Chinchilla_lanigera
FBgn0038327	Trax	93	36.170	ENSCSAG00000010285	TSNAX	92	36.170	Chlorocebus_sabaeus
FBgn0038327	Trax	82	36.992	ENSCHOG00000009515	-	92	36.992	Choloepus_hoffmanni
FBgn0038327	Trax	94	36.585	ENSCPBG00000006086	-	92	37.456	Chrysemys_picta_bellii
FBgn0038327	Trax	93	36.170	ENSCANG00000018814	TSNAX	91	37.705	Colobus_angolensis_palliatus
FBgn0038327	Trax	93	35.461	ENSCGRG00001011132	Tsnax	92	35.461	Cricetulus_griseus_chok1gshd
FBgn0038327	Trax	93	35.461	ENSCGRG00000017310	Tsnax	92	35.461	Cricetulus_griseus_crigri
FBgn0038327	Trax	85	36.364	ENSCSEG00000013110	tsnax	83	36.364	Cynoglossus_semilaevis
FBgn0038327	Trax	89	33.333	ENSCVAG00000003427	tsnax	88	33.333	Cyprinodon_variegatus
FBgn0038327	Trax	89	34.686	ENSDARG00000115282	tsnax	89	34.686	Danio_rerio
FBgn0038327	Trax	93	35.000	ENSDNOG00000049219	-	91	35.000	Dasypus_novemcinctus
FBgn0038327	Trax	87	37.548	ENSDORG00000013537	Tsnax	90	37.548	Dipodomys_ordii
FBgn0038327	Trax	81	35.656	ENSEBUG00000013286	tsnax	89	35.656	Eptatretus_burgeri
FBgn0038327	Trax	93	36.170	ENSEASG00005012828	-	92	36.170	Equus_asinus_asinus
FBgn0038327	Trax	57	46.591	ENSEEUG00000001465	-	58	46.591	Erinaceus_europaeus
FBgn0038327	Trax	85	38.340	ENSELUG00000018955	tsnax	81	38.340	Esox_lucius
FBgn0038327	Trax	93	35.461	ENSFCAG00000028088	-	92	35.461	Felis_catus
FBgn0038327	Trax	91	36.765	ENSFALG00000003260	-	89	36.765	Ficedula_albicollis
FBgn0038327	Trax	93	36.918	ENSFDAG00000015968	-	93	36.918	Fukomys_damarensis
FBgn0038327	Trax	85	35.294	ENSFHEG00000005717	tsnax	86	35.081	Fundulus_heteroclitus
FBgn0038327	Trax	85	36.863	ENSGMOG00000018552	tsnax	87	36.863	Gadus_morhua
FBgn0038327	Trax	93	37.809	ENSGALG00000037177	TSNAX	92	37.809	Gallus_gallus
FBgn0038327	Trax	94	35.439	ENSGAFG00000005000	tsnax	93	35.439	Gambusia_affinis
FBgn0038327	Trax	87	36.704	ENSGACG00000004171	tsnax	87	36.704	Gasterosteus_aculeatus
FBgn0038327	Trax	93	36.806	ENSGAGG00000012851	-	92	36.806	Gopherus_agassizii
FBgn0038327	Trax	93	36.525	ENSGGOG00000039786	TSNAX	92	36.525	Gorilla_gorilla
FBgn0038327	Trax	89	35.793	ENSHBUG00000020612	tsnax	89	35.793	Haplochromis_burtoni
FBgn0038327	Trax	93	36.525	ENSHGLG00000012839	TSNAX	92	36.525	Heterocephalus_glaber_female
FBgn0038327	Trax	93	35.816	ENSHGLG00100000780	-	92	35.816	Heterocephalus_glaber_male
FBgn0038327	Trax	94	35.714	ENSHCOG00000009732	tsnax	92	35.714	Hippocampus_comes
FBgn0038327	Trax	91	36.000	ENSIPUG00000018757	tsnax	91	36.000	Ictalurus_punctatus
FBgn0038327	Trax	93	34.043	ENSJJAG00000000228	-	92	34.043	Jaculus_jaculus
FBgn0038327	Trax	76	30.736	ENSJJAG00000012285	-	86	30.736	Jaculus_jaculus
FBgn0038327	Trax	94	36.268	ENSKMAG00000010607	tsnax	93	36.268	Kryptolebias_marmoratus
FBgn0038327	Trax	86	37.891	ENSLBEG00000023264	tsnax	84	37.891	Labrus_bergylta
FBgn0038327	Trax	86	37.891	ENSLBEG00000002951	-	84	37.891	Labrus_bergylta
FBgn0038327	Trax	94	35.764	ENSLACG00000006294	tsnax	93	35.764	Latimeria_chalumnae
FBgn0038327	Trax	84	37.849	ENSLOCG00000015831	tsnax	81	37.549	Lepisosteus_oculatus
FBgn0038327	Trax	93	34.752	ENSLAFG00000006692	-	92	34.752	Loxodonta_africana
FBgn0038327	Trax	93	36.170	ENSMFAG00000038495	TSNAX	92	36.170	Macaca_fascicularis
FBgn0038327	Trax	93	36.170	ENSMNEG00000038898	TSNAX	92	36.170	Macaca_nemestrina
FBgn0038327	Trax	93	36.170	ENSMLEG00000004157	TSNAX	91	37.705	Mandrillus_leucophaeus
FBgn0038327	Trax	94	36.655	ENSMAMG00000016932	tsnax	90	36.957	Mastacembelus_armatus
FBgn0038327	Trax	89	35.793	ENSMZEG00005010018	tsnax	89	35.793	Maylandia_zebra
FBgn0038327	Trax	91	37.868	ENSMGAG00000011981	-	89	37.868	Meleagris_gallopavo
FBgn0038327	Trax	55	33.533	ENSMAUG00000019962	Tsnax	93	33.533	Mesocricetus_auratus
FBgn0038327	Trax	93	35.461	ENSMICG00000043895	-	92	35.461	Microcebus_murinus
FBgn0038327	Trax	93	36.170	ENSMOCG00000007651	Tsnax	92	36.170	Microtus_ochrogaster
FBgn0038327	Trax	84	37.052	ENSMMOG00000008821	tsnax	84	37.052	Mola_mola
FBgn0038327	Trax	83	37.097	ENSMODG00000008812	-	91	37.097	Monodelphis_domestica
FBgn0038327	Trax	89	37.079	ENSMALG00000005640	tsnax	89	37.079	Monopterus_albus
FBgn0038327	Trax	93	35.915	MGP_CAROLIEiJ_G0031718	Tsnax	92	35.915	Mus_caroli
FBgn0038327	Trax	93	35.915	ENSMUSG00000056820	Tsnax	92	35.915	Mus_musculus
FBgn0038327	Trax	93	34.859	MGP_PahariEiJ_G0023316	Tsnax	92	34.859	Mus_pahari
FBgn0038327	Trax	93	35.563	MGP_SPRETEiJ_G0032836	Tsnax	92	35.563	Mus_spretus
FBgn0038327	Trax	93	35.816	ENSMPUG00000005572	-	92	35.816	Mustela_putorius_furo
FBgn0038327	Trax	54	35.404	ENSMLUG00000028551	-	87	35.404	Myotis_lucifugus
FBgn0038327	Trax	93	35.816	ENSMLUG00000015591	-	91	35.816	Myotis_lucifugus
FBgn0038327	Trax	93	35.211	ENSNGAG00000014498	Tsnax	92	35.211	Nannospalax_galili
FBgn0038327	Trax	82	35.918	ENSNBRG00000020060	tsnax	91	33.808	Neolamprologus_brichardi
FBgn0038327	Trax	93	36.170	ENSNLEG00000035882	TSNAX	96	36.719	Nomascus_leucogenys
FBgn0038327	Trax	66	46.591	ENSOPRG00000008613	-	68	46.591	Ochotona_princeps
FBgn0038327	Trax	90	34.831	ENSODEG00000005475	-	91	34.831	Octodon_degus
FBgn0038327	Trax	89	36.296	ENSONIG00000010125	tsnax	89	36.296	Oreochromis_niloticus
FBgn0038327	Trax	90	37.037	ENSOANG00000013721	-	88	37.037	Ornithorhynchus_anatinus
FBgn0038327	Trax	93	35.816	ENSOCUG00000029456	-	92	35.816	Oryctolagus_cuniculus
FBgn0038327	Trax	85	38.824	ENSORLG00000030285	tsnax	83	38.824	Oryzias_latipes
FBgn0038327	Trax	85	38.824	ENSORLG00020007594	tsnax	83	38.824	Oryzias_latipes_hni
FBgn0038327	Trax	85	38.824	ENSORLG00015022705	tsnax	83	38.824	Oryzias_latipes_hsok
FBgn0038327	Trax	93	38.351	ENSOMEG00000019256	tsnax	91	38.351	Oryzias_melastigma
FBgn0038327	Trax	93	35.357	ENSOGAG00000005575	-	91	35.357	Otolemur_garnettii
FBgn0038327	Trax	93	34.752	ENSOGAG00000027793	-	92	34.752	Otolemur_garnettii
FBgn0038327	Trax	93	35.816	ENSOARG00000003276	-	92	35.816	Ovis_aries
FBgn0038327	Trax	93	36.525	ENSPPAG00000030431	TSNAX	92	36.525	Pan_paniscus
FBgn0038327	Trax	93	35.461	ENSPPRG00000013142	-	92	35.461	Panthera_pardus
FBgn0038327	Trax	93	35.106	ENSPTIG00000014357	-	92	35.106	Panthera_tigris_altaica
FBgn0038327	Trax	93	36.170	ENSPTRG00000002111	TSNAX	92	36.170	Pan_troglodytes
FBgn0038327	Trax	93	36.170	ENSPANG00000008379	TSNAX	92	36.170	Papio_anubis
FBgn0038327	Trax	93	35.461	ENSPKIG00000023546	tsnax	92	35.461	Paramormyrops_kingsleyae
FBgn0038327	Trax	57	35.088	ENSPSIG00000005320	-	88	35.088	Pelodiscus_sinensis
FBgn0038327	Trax	89	36.604	ENSPMGG00000015045	tsnax	88	36.604	Periophthalmus_magnuspinnatus
FBgn0038327	Trax	87	36.398	ENSPFOG00000019341	tsnax	85	36.398	Poecilia_formosa
FBgn0038327	Trax	94	35.587	ENSPLAG00000011565	tsnax	92	35.587	Poecilia_latipinna
FBgn0038327	Trax	87	36.293	ENSPMEG00000023751	tsnax	85	35.907	Poecilia_mexicana
FBgn0038327	Trax	85	37.154	ENSPREG00000008389	tsnax	80	37.154	Poecilia_reticulata
FBgn0038327	Trax	93	36.525	ENSPPYG00000000112	TSNAX	92	36.525	Pongo_abelii
FBgn0038327	Trax	82	38.525	ENSPCAG00000015420	-	92	38.525	Procavia_capensis
FBgn0038327	Trax	93	34.629	ENSPCOG00000028517	-	92	34.629	Propithecus_coquereli
FBgn0038327	Trax	93	35.664	ENSPVAG00000008865	-	92	35.664	Pteropus_vampyrus
FBgn0038327	Trax	92	35.379	ENSPNYG00000013680	tsnax	90	35.379	Pundamilia_nyererei
FBgn0038327	Trax	91	37.091	ENSPNAG00000014630	tsnax	90	37.091	Pygocentrus_nattereri
FBgn0038327	Trax	93	35.211	ENSRNOG00000049784	Tsnax	92	35.211	Rattus_norvegicus
FBgn0038327	Trax	93	36.170	ENSRBIG00000040246	TSNAX	92	36.170	Rhinopithecus_bieti
FBgn0038327	Trax	93	36.170	ENSRROG00000044480	TSNAX	92	36.170	Rhinopithecus_roxellana
FBgn0038327	Trax	93	36.879	ENSSBOG00000024783	-	92	36.879	Saimiri_boliviensis_boliviensis
FBgn0038327	Trax	67	32.353	ENSSHAG00000006139	-	88	32.353	Sarcophilus_harrisii
FBgn0038327	Trax	93	34.276	ENSSFOG00015008267	tsnax	92	34.276	Scleropages_formosus
FBgn0038327	Trax	94	36.014	ENSSMAG00000010696	tsnax	93	36.014	Scophthalmus_maximus
FBgn0038327	Trax	87	36.293	ENSSDUG00000003358	tsnax	85	36.293	Seriola_dumerili
FBgn0038327	Trax	87	36.680	ENSSLDG00000024597	tsnax	85	36.680	Seriola_lalandi_dorsalis
FBgn0038327	Trax	94	35.211	ENSSARG00000011348	-	93	35.211	Sorex_araneus
FBgn0038327	Trax	93	36.042	ENSSPUG00000012541	-	92	36.042	Sphenodon_punctatus
FBgn0038327	Trax	94	35.000	ENSSPAG00000006951	tsnax	93	33.571	Stegastes_partitus
FBgn0038327	Trax	93	35.563	ENSSSCG00000010171	TSNAX	92	35.563	Sus_scrofa
FBgn0038327	Trax	93	36.396	ENSTGUG00000010090	-	92	36.396	Taeniopygia_guttata
FBgn0038327	Trax	85	37.549	ENSTRUG00000013041	tsnax	83	37.549	Takifugu_rubripes
FBgn0038327	Trax	94	35.714	ENSTNIG00000002351	tsnax	92	35.714	Tetraodon_nigroviridis
FBgn0038327	Trax	82	38.525	ENSTTRG00000016578	-	92	38.525	Tursiops_truncatus
FBgn0038327	Trax	93	35.357	ENSUMAG00000005995	-	92	35.357	Ursus_maritimus
FBgn0038327	Trax	80	34.440	ENSVPAG00000003808	-	96	34.440	Vicugna_pacos
FBgn0038327	Trax	93	34.859	ENSVVUG00000007083	-	92	34.859	Vulpes_vulpes
FBgn0038327	Trax	94	35.154	ENSXETG00000026152	tsnax	93	35.154	Xenopus_tropicalis
FBgn0038327	Trax	94	34.643	ENSXCOG00000006896	tsnax	92	34.643	Xiphophorus_couchianus
FBgn0038327	Trax	94	35.231	ENSXMAG00000006738	tsnax	93	35.231	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0004521	endoribonuclease activity	21873635.	IBA	Function
GO:0004521	endoribonuclease activity	19661431.	IDA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	17028328.	IDA	Component
GO:0043565	sequence-specific DNA binding	21873635.	IBA	Function
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	19661431.	IDA	Process