EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038471 (Gene tree)
Gene ID: 42056
Gene Symbol: CG5220
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1214 bases
Position: chr3R:17040682-17041895
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082832	FtsJ	PF01728.19	8.3e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083391	-	1102	-	FBpp0082832	302 (aa)	-	Q9VEP1

Gene Model

Click here to download FBgn0038471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0038471	CG5220	71	62.791	FBgn0038861	CG7009	67	62.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038471	CG5220	83	58.400	ENSG00000068438	FTSJ1	74	57.647	Homo_sapiens
FBgn0038471	CG5220	83	61.905	ENSAPOG00000018541	ftsj1	79	61.905	Acanthochromis_polyacanthus
FBgn0038471	CG5220	83	56.809	ENSAMEG00000012735	FTSJ1	74	56.809	Ailuropoda_melanoleuca
FBgn0038471	CG5220	83	60.714	ENSACIG00000001541	ftsj1	79	60.714	Amphilophus_citrinellus
FBgn0038471	CG5220	83	61.569	ENSAOCG00000009380	ftsj1	79	61.569	Amphiprion_ocellaris
FBgn0038471	CG5220	83	61.569	ENSAPEG00000020434	ftsj1	79	61.569	Amphiprion_percula
FBgn0038471	CG5220	83	61.811	ENSATEG00000008408	ftsj1	79	61.811	Anabas_testudineus
FBgn0038471	CG5220	72	60.369	ENSACAG00000016605	FTSJ1	71	60.369	Anolis_carolinensis
FBgn0038471	CG5220	83	53.906	ENSANAG00000035537	-	80	53.906	Aotus_nancymaae
FBgn0038471	CG5220	83	56.641	ENSANAG00000030571	-	74	56.641	Aotus_nancymaae
FBgn0038471	CG5220	83	60.392	ENSACLG00000014226	ftsj1	79	60.392	Astatotilapia_calliptera
FBgn0038471	CG5220	83	61.508	ENSAMXG00000037663	ftsj1	77	61.508	Astyanax_mexicanus
FBgn0038471	CG5220	83	54.400	ENSBTAG00000046593	-	80	54.183	Bos_taurus
FBgn0038471	CG5220	83	57.031	ENSBTAG00000031829	FTSJ1	79	57.031	Bos_taurus
FBgn0038471	CG5220	83	53.968	WBGene00011281	R74.7	71	53.968	Caenorhabditis_elegans
FBgn0038471	CG5220	83	56.641	ENSCJAG00000002256	FTSJ1	74	56.641	Callithrix_jacchus
FBgn0038471	CG5220	83	57.255	ENSCAFG00000015339	FTSJ1	74	57.255	Canis_familiaris
FBgn0038471	CG5220	83	57.255	ENSCAFG00020021351	FTSJ1	74	57.255	Canis_lupus_dingo
FBgn0038471	CG5220	83	57.031	ENSCHIG00000000441	-	74	57.031	Capra_hircus
FBgn0038471	CG5220	97	47.651	ENSCHIG00000021392	-	87	47.651	Capra_hircus
FBgn0038471	CG5220	83	49.004	ENSCHIG00000017370	-	78	49.004	Capra_hircus
FBgn0038471	CG5220	83	57.647	ENSTSYG00000029207	FTSJ1	74	57.647	Carlito_syrichta
FBgn0038471	CG5220	83	45.525	ENSCAPG00000011705	FTSJ1	77	45.525	Cavia_aperea
FBgn0038471	CG5220	83	56.420	ENSCPOG00000030576	FTSJ1	74	56.420	Cavia_porcellus
FBgn0038471	CG5220	83	56.641	ENSCCAG00000027731	FTSJ1	74	56.641	Cebus_capucinus
FBgn0038471	CG5220	83	57.255	ENSCATG00000013045	FTSJ1	74	57.255	Cercocebus_atys
FBgn0038471	CG5220	83	56.420	ENSCLAG00000011582	FTSJ1	74	56.420	Chinchilla_lanigera
FBgn0038471	CG5220	83	57.255	ENSCSAG00000013278	FTSJ1	74	57.255	Chlorocebus_sabaeus
FBgn0038471	CG5220	83	62.055	ENSCING00000008473	-	78	62.055	Ciona_intestinalis
FBgn0038471	CG5220	83	60.465	ENSCSAVG00000010259	-	82	60.465	Ciona_savignyi
FBgn0038471	CG5220	83	58.000	ENSCANG00000033841	FTSJ1	74	57.255	Colobus_angolensis_palliatus
FBgn0038471	CG5220	83	57.769	ENSCGRG00001023654	Ftsj1	74	57.769	Cricetulus_griseus_chok1gshd
FBgn0038471	CG5220	83	58.167	ENSCGRG00000007253	Ftsj1	73	58.167	Cricetulus_griseus_crigri
FBgn0038471	CG5220	83	51.779	ENSCSEG00000018843	ftsj1	75	51.779	Cynoglossus_semilaevis
FBgn0038471	CG5220	83	60.784	ENSCVAG00000009618	ftsj1	81	60.784	Cyprinodon_variegatus
FBgn0038471	CG5220	83	63.922	ENSDARG00000057089	ftsj1	98	79.365	Danio_rerio
FBgn0038471	CG5220	68	41.176	ENSDNOG00000044320	-	67	40.271	Dasypus_novemcinctus
FBgn0038471	CG5220	83	58.000	ENSDNOG00000047923	-	74	58.000	Dasypus_novemcinctus
FBgn0038471	CG5220	83	57.198	ENSDORG00000000074	Ftsj1	77	57.198	Dipodomys_ordii
FBgn0038471	CG5220	73	50.228	ENSETEG00000014092	-	63	50.228	Echinops_telfairi
FBgn0038471	CG5220	70	43.602	ENSETEG00000018343	-	60	43.602	Echinops_telfairi
FBgn0038471	CG5220	61	56.085	ENSEBUG00000005843	ftsj1	57	56.085	Eptatretus_burgeri
FBgn0038471	CG5220	83	57.647	ENSECAG00000019260	FTSJ1	74	57.647	Equus_caballus
FBgn0038471	CG5220	83	56.863	ENSEEUG00000001469	FTSJ1	83	56.641	Erinaceus_europaeus
FBgn0038471	CG5220	83	61.660	ENSELUG00000011483	ftsj1	76	61.660	Esox_lucius
FBgn0038471	CG5220	83	56.863	ENSFCAG00000026453	FTSJ1	74	56.863	Felis_catus
FBgn0038471	CG5220	98	52.203	ENSFDAG00000011250	FTSJ1	80	52.203	Fukomys_damarensis
FBgn0038471	CG5220	83	60.784	ENSFHEG00000008464	ftsj1	79	60.784	Fundulus_heteroclitus
FBgn0038471	CG5220	83	61.355	ENSGMOG00000004562	ftsj1	84	61.355	Gadus_morhua
FBgn0038471	CG5220	55	58.084	ENSGAFG00000002036	ftsj1	73	58.084	Gambusia_affinis
FBgn0038471	CG5220	83	61.111	ENSGACG00000008843	ftsj1	78	61.111	Gasterosteus_aculeatus
FBgn0038471	CG5220	83	57.647	ENSGGOG00000028552	FTSJ1	74	57.647	Gorilla_gorilla
FBgn0038471	CG5220	83	60.392	ENSHBUG00000015883	ftsj1	79	60.392	Haplochromis_burtoni
FBgn0038471	CG5220	83	56.809	ENSHGLG00000003132	FTSJ1	75	56.809	Heterocephalus_glaber_female
FBgn0038471	CG5220	83	56.809	ENSHGLG00100014682	FTSJ1	75	56.809	Heterocephalus_glaber_male
FBgn0038471	CG5220	83	61.905	ENSHCOG00000010145	ftsj1	80	61.905	Hippocampus_comes
FBgn0038471	CG5220	83	60.714	ENSIPUG00000005052	FTSJ1	77	60.714	Ictalurus_punctatus
FBgn0038471	CG5220	83	56.809	ENSSTOG00000027717	FTSJ1	74	56.809	Ictidomys_tridecemlineatus
FBgn0038471	CG5220	83	54.864	ENSJJAG00000011596	-	79	54.864	Jaculus_jaculus
FBgn0038471	CG5220	83	56.031	ENSJJAG00000014517	-	74	56.031	Jaculus_jaculus
FBgn0038471	CG5220	83	62.302	ENSKMAG00000000645	ftsj1	78	62.302	Kryptolebias_marmoratus
FBgn0038471	CG5220	83	61.240	ENSLBEG00000005293	ftsj1	71	61.240	Labrus_bergylta
FBgn0038471	CG5220	81	77.778	ENSLACG00000009913	FTSJ1	73	77.778	Latimeria_chalumnae
FBgn0038471	CG5220	83	62.302	ENSLOCG00000015688	ftsj1	73	62.302	Lepisosteus_oculatus
FBgn0038471	CG5220	83	54.902	ENSLAFG00000032618	FTSJ1	73	54.902	Loxodonta_africana
FBgn0038471	CG5220	83	57.255	ENSMFAG00000003467	FTSJ1	74	57.255	Macaca_fascicularis
FBgn0038471	CG5220	83	57.255	ENSMMUG00000018894	FTSJ1	74	57.255	Macaca_mulatta
FBgn0038471	CG5220	83	57.255	ENSMNEG00000044348	FTSJ1	74	57.255	Macaca_nemestrina
FBgn0038471	CG5220	83	58.000	ENSMLEG00000016789	FTSJ1	74	57.255	Mandrillus_leucophaeus
FBgn0038471	CG5220	83	61.508	ENSMAMG00000022841	ftsj1	76	61.508	Mastacembelus_armatus
FBgn0038471	CG5220	83	60.392	ENSMZEG00005022583	ftsj1	79	60.392	Maylandia_zebra
FBgn0038471	CG5220	83	56.809	ENSMAUG00000015442	Ftsj1	74	56.809	Mesocricetus_auratus
FBgn0038471	CG5220	83	57.647	ENSMICG00000036228	-	82	57.647	Microcebus_murinus
FBgn0038471	CG5220	83	56.800	ENSMOCG00000021218	-	73	56.574	Microtus_ochrogaster
FBgn0038471	CG5220	78	57.627	ENSMOCG00000020523	-	72	57.627	Microtus_ochrogaster
FBgn0038471	CG5220	74	61.883	ENSMOCG00000000507	-	99	61.883	Microtus_ochrogaster
FBgn0038471	CG5220	83	58.268	ENSMMOG00000018969	ftsj1	79	58.268	Mola_mola
FBgn0038471	CG5220	83	61.328	ENSMODG00000011356	FTSJ1	82	61.328	Monodelphis_domestica
FBgn0038471	CG5220	83	59.921	ENSMALG00000014209	ftsj1	79	59.921	Monopterus_albus
FBgn0038471	CG5220	83	58.566	MGP_CAROLIEiJ_G0032918	Ftsj1	78	58.566	Mus_caroli
FBgn0038471	CG5220	83	58.566	ENSMUSG00000031171	Ftsj1	78	58.566	Mus_musculus
FBgn0038471	CG5220	83	58.566	MGP_PahariEiJ_G0031467	Ftsj1	75	57.588	Mus_pahari
FBgn0038471	CG5220	83	58.566	MGP_SPRETEiJ_G0034067	Ftsj1	78	58.566	Mus_spretus
FBgn0038471	CG5220	83	57.031	ENSMPUG00000013493	FTSJ1	74	57.031	Mustela_putorius_furo
FBgn0038471	CG5220	83	57.198	ENSMLUG00000003977	FTSJ1	74	57.198	Myotis_lucifugus
FBgn0038471	CG5220	83	57.198	ENSNGAG00000018629	-	74	57.198	Nannospalax_galili
FBgn0038471	CG5220	83	52.734	ENSNGAG00000016847	-	75	52.734	Nannospalax_galili
FBgn0038471	CG5220	83	53.659	ENSNBRG00000012481	ftsj1	81	53.659	Neolamprologus_brichardi
FBgn0038471	CG5220	83	52.941	ENSNLEG00000007816	FTSJ1	73	52.941	Nomascus_leucogenys
FBgn0038471	CG5220	83	56.420	ENSODEG00000009855	FTSJ1	74	56.420	Octodon_degus
FBgn0038471	CG5220	83	60.938	ENSONIG00000003966	ftsj1	81	60.938	Oreochromis_niloticus
FBgn0038471	CG5220	98	50.667	ENSOCUG00000024620	-	81	50.667	Oryctolagus_cuniculus
FBgn0038471	CG5220	83	58.167	ENSOCUG00000008009	-	73	58.167	Oryctolagus_cuniculus
FBgn0038471	CG5220	98	51.667	ENSOCUG00000023277	-	81	51.667	Oryctolagus_cuniculus
FBgn0038471	CG5220	83	60.714	ENSORLG00000028355	ftsj1	80	60.714	Oryzias_latipes
FBgn0038471	CG5220	83	60.714	ENSORLG00020007897	ftsj1	80	60.714	Oryzias_latipes_hni
FBgn0038471	CG5220	83	60.714	ENSOMEG00000018497	ftsj1	73	60.714	Oryzias_melastigma
FBgn0038471	CG5220	83	57.200	ENSOGAG00000032641	-	75	57.200	Otolemur_garnettii
FBgn0038471	CG5220	83	48.249	ENSOGAG00000016174	-	73	48.606	Otolemur_garnettii
FBgn0038471	CG5220	83	57.031	ENSOARG00000012432	-	74	57.031	Ovis_aries
FBgn0038471	CG5220	82	51.984	ENSOARG00000012099	-	78	51.984	Ovis_aries
FBgn0038471	CG5220	83	58.400	ENSPPAG00000028540	FTSJ1	74	57.647	Pan_paniscus
FBgn0038471	CG5220	83	56.863	ENSPPRG00000000249	FTSJ1	74	56.863	Panthera_pardus
FBgn0038471	CG5220	83	56.863	ENSPTIG00000017680	FTSJ1	74	56.863	Panthera_tigris_altaica
FBgn0038471	CG5220	83	58.400	ENSPTRG00000049433	FTSJ1	74	57.647	Pan_troglodytes
FBgn0038471	CG5220	83	57.255	ENSPANG00000010102	FTSJ1	74	57.255	Papio_anubis
FBgn0038471	CG5220	83	61.089	ENSPKIG00000019318	ftsj1	75	61.089	Paramormyrops_kingsleyae
FBgn0038471	CG5220	83	44.223	ENSPSIG00000007020	FTSJ1	85	44.223	Pelodiscus_sinensis
FBgn0038471	CG5220	83	57.769	ENSPEMG00000013262	-	81	57.769	Peromyscus_maniculatus_bairdii
FBgn0038471	CG5220	83	58.964	ENSPEMG00000015698	-	74	58.964	Peromyscus_maniculatus_bairdii
FBgn0038471	CG5220	83	59.761	ENSPMAG00000006943	FTSJ1	83	59.761	Petromyzon_marinus
FBgn0038471	CG5220	83	61.176	ENSPCIG00000007236	FTSJ1	77	61.176	Phascolarctos_cinereus
FBgn0038471	CG5220	83	61.961	ENSPFOG00000017003	ftsj1	79	61.961	Poecilia_formosa
FBgn0038471	CG5220	83	61.569	ENSPLAG00000016190	ftsj1	87	61.569	Poecilia_latipinna
FBgn0038471	CG5220	83	61.176	ENSPMEG00000021719	ftsj1	78	61.176	Poecilia_mexicana
FBgn0038471	CG5220	83	61.569	ENSPREG00000016616	ftsj1	79	61.569	Poecilia_reticulata
FBgn0038471	CG5220	83	57.647	ENSPCOG00000022716	-	78	57.647	Propithecus_coquereli
FBgn0038471	CG5220	83	57.600	ENSPCOG00000018822	-	73	57.600	Propithecus_coquereli
FBgn0038471	CG5220	83	60.392	ENSPNYG00000011144	ftsj1	79	60.392	Pundamilia_nyererei
FBgn0038471	CG5220	91	58.394	ENSPNAG00000016330	ftsj1	83	58.394	Pygocentrus_nattereri
FBgn0038471	CG5220	83	58.566	ENSRNOG00000004776	Ftsj1	74	58.566	Rattus_norvegicus
FBgn0038471	CG5220	83	57.255	ENSRBIG00000027511	FTSJ1	74	57.255	Rhinopithecus_bieti
FBgn0038471	CG5220	83	57.255	ENSRROG00000029757	FTSJ1	74	57.255	Rhinopithecus_roxellana
FBgn0038471	CG5220	83	48.302	YBR061C	TRM7	85	48.302	Saccharomyces_cerevisiae
FBgn0038471	CG5220	83	57.600	ENSSBOG00000028146	FTSJ1	73	57.600	Saimiri_boliviensis_boliviensis
FBgn0038471	CG5220	83	60.392	ENSSHAG00000012607	FTSJ1	79	60.392	Sarcophilus_harrisii
FBgn0038471	CG5220	83	61.265	ENSSFOG00015006275	ftsj1	74	61.265	Scleropages_formosus
FBgn0038471	CG5220	83	61.508	ENSSMAG00000001754	ftsj1	79	61.508	Scophthalmus_maximus
FBgn0038471	CG5220	83	59.127	ENSSDUG00000015226	ftsj1	78	59.127	Seriola_dumerili
FBgn0038471	CG5220	83	61.508	ENSSLDG00000019859	ftsj1	79	61.508	Seriola_lalandi_dorsalis
FBgn0038471	CG5220	85	55.172	ENSSARG00000007246	-	100	55.172	Sorex_araneus
FBgn0038471	CG5220	83	57.031	ENSSARG00000007091	-	77	57.031	Sorex_araneus
FBgn0038471	CG5220	83	60.392	ENSSPAG00000022047	ftsj1	79	60.392	Stegastes_partitus
FBgn0038471	CG5220	83	56.641	ENSSSCG00000025599	FTSJ1	74	56.641	Sus_scrofa
FBgn0038471	CG5220	83	59.921	ENSTRUG00000016142	ftsj1	78	59.921	Takifugu_rubripes
FBgn0038471	CG5220	83	59.921	ENSTNIG00000010402	ftsj1	80	59.921	Tetraodon_nigroviridis
FBgn0038471	CG5220	83	56.250	ENSTTRG00000009027	FTSJ1	74	56.250	Tursiops_truncatus
FBgn0038471	CG5220	83	57.255	ENSUAMG00000013296	FTSJ1	72	57.255	Ursus_americanus
FBgn0038471	CG5220	83	50.196	ENSUMAG00000007966	FTSJ1	73	50.196	Ursus_maritimus
FBgn0038471	CG5220	83	57.255	ENSVVUG00000017640	FTSJ1	74	57.255	Vulpes_vulpes
FBgn0038471	CG5220	83	57.143	ENSXCOG00000003344	ftsj1	75	57.143	Xiphophorus_couchianus
FBgn0038471	CG5220	83	61.905	ENSXMAG00000009372	ftsj1	80	61.905	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002181	cytoplasmic translation	21873635.	IBA	Process
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0008175	tRNA methyltransferase activity	21873635.	IBA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process