EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038474 (Gene tree)
Gene ID: 42061
Gene Symbol: mRpS11
Alias: -
Full Name: mitochondrial ribosomal protein S11
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1064 bases
Position: chr3R:17072732-17073795
Accession: FBgn0038474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0088833	Ribosomal_S11	PF00411.19	2.7e-23	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0089894	-	729	-	FBpp0088833	200 (aa)	-	Q8SXD7

Gene Model

Click here to download FBgn0038474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038474	mRpS11	60	48.333	ENSG00000181991	MRPS11	62	48.333	Homo_sapiens
FBgn0038474	mRpS11	59	55.932	ENSAPOG00000018727	mrps11	61	55.932	Acanthochromis_polyacanthus
FBgn0038474	mRpS11	60	51.639	ENSAMEG00000012776	MRPS11	61	51.639	Ailuropoda_melanoleuca
FBgn0038474	mRpS11	73	47.973	ENSACIG00000007679	mrps11	75	55.000	Amphilophus_citrinellus
FBgn0038474	mRpS11	60	54.167	ENSAOCG00000000916	mrps11	50	54.167	Amphiprion_ocellaris
FBgn0038474	mRpS11	60	54.167	ENSAPEG00000006598	mrps11	62	54.167	Amphiprion_percula
FBgn0038474	mRpS11	58	57.759	ENSATEG00000005662	mrps11	60	56.780	Anabas_testudineus
FBgn0038474	mRpS11	93	41.176	ENSAPLG00000012913	MRPS11	94	41.146	Anas_platyrhynchos
FBgn0038474	mRpS11	66	49.624	ENSACAG00000005360	MRPS11	72	49.624	Anolis_carolinensis
FBgn0038474	mRpS11	60	50.833	ENSANAG00000035828	MRPS11	63	50.833	Aotus_nancymaae
FBgn0038474	mRpS11	59	54.237	ENSACLG00000019910	mrps11	62	54.237	Astatotilapia_calliptera
FBgn0038474	mRpS11	60	51.667	ENSAMXG00000021547	mrps11	59	51.667	Astyanax_mexicanus
FBgn0038474	mRpS11	60	52.459	ENSBTAG00000019831	MRPS11	61	52.459	Bos_taurus
FBgn0038474	mRpS11	76	43.791	WBGene00012244	mrps-11	72	43.791	Caenorhabditis_elegans
FBgn0038474	mRpS11	60	51.667	ENSCJAG00000013012	MRPS11	63	51.667	Callithrix_jacchus
FBgn0038474	mRpS11	60	50.833	ENSCAFG00000011502	MRPS11	61	50.833	Canis_familiaris
FBgn0038474	mRpS11	60	50.833	ENSCAFG00020018868	MRPS11	61	50.833	Canis_lupus_dingo
FBgn0038474	mRpS11	60	52.459	ENSCHIG00000022002	MRPS11	61	52.459	Capra_hircus
FBgn0038474	mRpS11	58	53.043	ENSTSYG00000011176	MRPS11	60	53.043	Carlito_syrichta
FBgn0038474	mRpS11	66	49.242	ENSCAPG00000012155	MRPS11	90	51.667	Cavia_aperea
FBgn0038474	mRpS11	71	45.890	ENSCPOG00000014489	MRPS11	76	45.890	Cavia_porcellus
FBgn0038474	mRpS11	53	44.762	ENSCCAG00000021347	-	53	44.762	Cebus_capucinus
FBgn0038474	mRpS11	80	41.040	ENSCCAG00000031468	-	90	41.040	Cebus_capucinus
FBgn0038474	mRpS11	60	50.000	ENSCATG00000016716	MRPS11	62	50.000	Cercocebus_atys
FBgn0038474	mRpS11	97	38.265	ENSCLAG00000017346	MRPS11	93	38.265	Chinchilla_lanigera
FBgn0038474	mRpS11	60	50.000	ENSCSAG00000017199	MRPS11	62	50.000	Chlorocebus_sabaeus
FBgn0038474	mRpS11	60	50.000	ENSCHOG00000009121	MRPS11	61	50.000	Choloepus_hoffmanni
FBgn0038474	mRpS11	60	50.833	ENSCANG00000037910	MRPS11	62	50.833	Colobus_angolensis_palliatus
FBgn0038474	mRpS11	76	42.105	ENSCGRG00001012765	Mrps11	80	42.105	Cricetulus_griseus_chok1gshd
FBgn0038474	mRpS11	76	42.105	ENSCGRG00000004167	Mrps11	80	42.105	Cricetulus_griseus_crigri
FBgn0038474	mRpS11	60	50.833	ENSCSEG00000010615	mrps11	62	50.833	Cynoglossus_semilaevis
FBgn0038474	mRpS11	82	42.424	ENSCVAG00000013577	mrps11	92	42.424	Cyprinodon_variegatus
FBgn0038474	mRpS11	58	55.652	ENSDARG00000075129	mrps11	58	55.652	Danio_rerio
FBgn0038474	mRpS11	60	49.167	ENSDNOG00000005258	MRPS11	62	49.167	Dasypus_novemcinctus
FBgn0038474	mRpS11	66	50.000	ENSDORG00000024352	Mrps11	99	50.000	Dipodomys_ordii
FBgn0038474	mRpS11	78	37.975	ENSEBUG00000010376	mrps11	68	44.915	Eptatretus_burgeri
FBgn0038474	mRpS11	60	50.833	ENSEASG00005015369	MRPS11	62	50.833	Equus_asinus_asinus
FBgn0038474	mRpS11	60	50.833	ENSECAG00000007319	MRPS11	62	50.833	Equus_caballus
FBgn0038474	mRpS11	60	52.500	ENSELUG00000016452	mrps11	77	52.500	Esox_lucius
FBgn0038474	mRpS11	60	51.639	ENSFCAG00000014967	MRPS11	61	51.639	Felis_catus
FBgn0038474	mRpS11	60	50.833	ENSFALG00000010437	MRPS11	73	50.833	Ficedula_albicollis
FBgn0038474	mRpS11	65	46.923	ENSFDAG00000018915	MRPS11	63	49.167	Fukomys_damarensis
FBgn0038474	mRpS11	66	50.376	ENSFHEG00000001310	mrps11	68	50.376	Fundulus_heteroclitus
FBgn0038474	mRpS11	60	54.545	ENSGMOG00000018625	mrps11	90	54.545	Gadus_morhua
FBgn0038474	mRpS11	60	49.167	ENSGALG00000006777	MRPS11	66	49.167	Gallus_gallus
FBgn0038474	mRpS11	59	55.085	ENSGAFG00000001720	mrps11	61	55.085	Gambusia_affinis
FBgn0038474	mRpS11	59	53.390	ENSGACG00000014791	mrps11	88	53.390	Gasterosteus_aculeatus
FBgn0038474	mRpS11	66	46.970	ENSGAGG00000013556	MRPS11	69	46.970	Gopherus_agassizii
FBgn0038474	mRpS11	60	48.333	ENSGGOG00000015152	MRPS11	62	48.333	Gorilla_gorilla
FBgn0038474	mRpS11	59	54.237	ENSHBUG00000019804	mrps11	65	54.237	Haplochromis_burtoni
FBgn0038474	mRpS11	90	38.674	ENSHGLG00000007732	MRPS11	91	38.674	Heterocephalus_glaber_female
FBgn0038474	mRpS11	90	38.674	ENSHGLG00100010255	MRPS11	91	38.674	Heterocephalus_glaber_male
FBgn0038474	mRpS11	60	52.893	ENSHCOG00000001347	mrps11	76	53.719	Hippocampus_comes
FBgn0038474	mRpS11	59	56.780	ENSIPUG00000022494	MRPS11	58	56.780	Ictalurus_punctatus
FBgn0038474	mRpS11	60	51.667	ENSSTOG00000021237	MRPS11	76	51.667	Ictidomys_tridecemlineatus
FBgn0038474	mRpS11	60	51.667	ENSJJAG00000000570	Mrps11	61	51.667	Jaculus_jaculus
FBgn0038474	mRpS11	59	55.085	ENSKMAG00000000890	mrps11	60	55.085	Kryptolebias_marmoratus
FBgn0038474	mRpS11	59	51.695	ENSLBEG00000023307	mrps11	63	51.695	Labrus_bergylta
FBgn0038474	mRpS11	60	52.500	ENSLACG00000007480	MRPS11	61	52.500	Latimeria_chalumnae
FBgn0038474	mRpS11	58	57.759	ENSLOCG00000014531	mrps11	57	57.759	Lepisosteus_oculatus
FBgn0038474	mRpS11	60	51.667	ENSLAFG00000030086	MRPS11	63	51.667	Loxodonta_africana
FBgn0038474	mRpS11	60	50.000	ENSMFAG00000001006	MRPS11	62	50.000	Macaca_fascicularis
FBgn0038474	mRpS11	60	50.000	ENSMMUG00000013659	MRPS11	62	50.000	Macaca_mulatta
FBgn0038474	mRpS11	60	50.000	ENSMNEG00000039978	MRPS11	62	50.000	Macaca_nemestrina
FBgn0038474	mRpS11	60	50.833	ENSMLEG00000037050	MRPS11	62	50.833	Mandrillus_leucophaeus
FBgn0038474	mRpS11	60	51.667	ENSMAMG00000006581	mrps11	62	51.667	Mastacembelus_armatus
FBgn0038474	mRpS11	59	54.237	ENSMZEG00005005157	mrps11	58	54.237	Maylandia_zebra
FBgn0038474	mRpS11	60	48.361	ENSMGAG00000008763	MRPS11	74	48.361	Meleagris_gallopavo
FBgn0038474	mRpS11	77	42.208	ENSMAUG00000006622	Mrps11	81	42.208	Mesocricetus_auratus
FBgn0038474	mRpS11	60	50.833	ENSMICG00000015830	MRPS11	62	50.833	Microcebus_murinus
FBgn0038474	mRpS11	91	40.437	ENSMOCG00000020525	Mrps11	86	40.437	Microtus_ochrogaster
FBgn0038474	mRpS11	60	53.333	ENSMMOG00000015779	mrps11	78	53.333	Mola_mola
FBgn0038474	mRpS11	65	48.062	ENSMODG00000019589	MRPS11	65	48.062	Monodelphis_domestica
FBgn0038474	mRpS11	60	53.333	ENSMALG00000012248	mrps11	61	53.333	Monopterus_albus
FBgn0038474	mRpS11	76	42.105	MGP_CAROLIEiJ_G0029870	Mrps11	80	42.105	Mus_caroli
FBgn0038474	mRpS11	76	41.447	ENSMUSG00000030611	Mrps11	63	49.167	Mus_musculus
FBgn0038474	mRpS11	76	42.105	MGP_PahariEiJ_G0013092	Mrps11	80	42.105	Mus_pahari
FBgn0038474	mRpS11	76	42.105	MGP_SPRETEiJ_G0030972	Mrps11	80	42.105	Mus_spretus
FBgn0038474	mRpS11	95	41.919	ENSMPUG00000015823	MRPS11	94	41.919	Mustela_putorius_furo
FBgn0038474	mRpS11	95	40.909	ENSNGAG00000010433	Mrps11	94	40.909	Nannospalax_galili
FBgn0038474	mRpS11	59	54.237	ENSNBRG00000006581	mrps11	60	54.237	Neolamprologus_brichardi
FBgn0038474	mRpS11	60	49.167	ENSNLEG00000034839	MRPS11	62	49.167	Nomascus_leucogenys
FBgn0038474	mRpS11	67	45.926	ENSOPRG00000008247	MRPS11	83	45.926	Ochotona_princeps
FBgn0038474	mRpS11	95	39.196	ENSODEG00000014618	MRPS11	94	39.196	Octodon_degus
FBgn0038474	mRpS11	60	53.333	ENSONIG00000003016	mrps11	57	53.333	Oreochromis_niloticus
FBgn0038474	mRpS11	83	43.114	ENSOANG00000015559	MRPS11	85	49.242	Ornithorhynchus_anatinus
FBgn0038474	mRpS11	60	51.667	ENSOCUG00000025921	MRPS11	65	51.667	Oryctolagus_cuniculus
FBgn0038474	mRpS11	60	53.333	ENSORLG00000014573	mrps11	62	53.333	Oryzias_latipes
FBgn0038474	mRpS11	60	53.333	ENSORLG00020019097	mrps11	61	53.333	Oryzias_latipes_hni
FBgn0038474	mRpS11	60	52.500	ENSORLG00015017121	mrps11	62	52.500	Oryzias_latipes_hsok
FBgn0038474	mRpS11	60	55.372	ENSOMEG00000017915	mrps11	62	55.372	Oryzias_melastigma
FBgn0038474	mRpS11	60	51.667	ENSOGAG00000004739	MRPS11	69	51.667	Otolemur_garnettii
FBgn0038474	mRpS11	60	52.459	ENSOARG00000010899	MRPS11	61	52.459	Ovis_aries
FBgn0038474	mRpS11	60	48.333	ENSPPAG00000028073	MRPS11	62	48.333	Pan_paniscus
FBgn0038474	mRpS11	60	51.639	ENSPPRG00000001535	MRPS11	61	51.639	Panthera_pardus
FBgn0038474	mRpS11	60	51.639	ENSPTIG00000020641	MRPS11	61	51.639	Panthera_tigris_altaica
FBgn0038474	mRpS11	60	48.333	ENSPTRG00000007420	MRPS11	62	48.333	Pan_troglodytes
FBgn0038474	mRpS11	60	50.833	ENSPANG00000011753	MRPS11	62	50.833	Papio_anubis
FBgn0038474	mRpS11	55	41.441	ENSPKIG00000014626	-	51	43.878	Paramormyrops_kingsleyae
FBgn0038474	mRpS11	60	46.667	ENSPSIG00000014576	MRPS11	59	46.667	Pelodiscus_sinensis
FBgn0038474	mRpS11	89	41.341	ENSPMGG00000023147	mrps11	75	47.619	Periophthalmus_magnuspinnatus
FBgn0038474	mRpS11	60	50.000	ENSPEMG00000012996	Mrps11	63	50.000	Peromyscus_maniculatus_bairdii
FBgn0038474	mRpS11	93	39.785	ENSPMAG00000008136	mrps11	93	39.247	Petromyzon_marinus
FBgn0038474	mRpS11	59	55.085	ENSPFOG00000017576	mrps11	61	55.085	Poecilia_formosa
FBgn0038474	mRpS11	59	55.085	ENSPLAG00000016343	mrps11	61	55.085	Poecilia_latipinna
FBgn0038474	mRpS11	59	55.085	ENSPMEG00000003695	mrps11	61	55.085	Poecilia_mexicana
FBgn0038474	mRpS11	59	54.237	ENSPREG00000004767	mrps11	61	54.237	Poecilia_reticulata
FBgn0038474	mRpS11	66	45.455	ENSPPYG00000006751	MRPS11	68	45.455	Pongo_abelii
FBgn0038474	mRpS11	77	31.613	ENSPCAG00000003032	MRPS11	79	31.613	Procavia_capensis
FBgn0038474	mRpS11	76	43.226	ENSPCOG00000019243	MRPS11	80	43.226	Propithecus_coquereli
FBgn0038474	mRpS11	60	50.833	ENSPVAG00000001594	MRPS11	60	50.833	Pteropus_vampyrus
FBgn0038474	mRpS11	59	54.237	ENSPNYG00000008428	mrps11	60	54.237	Pundamilia_nyererei
FBgn0038474	mRpS11	65	52.308	ENSPNAG00000002759	mrps11	68	52.308	Pygocentrus_nattereri
FBgn0038474	mRpS11	80	40.237	ENSRNOG00000018531	Mrps11	88	40.237	Rattus_norvegicus
FBgn0038474	mRpS11	80	38.824	ENSRNOG00000003080	AABR07021945.1	88	38.824	Rattus_norvegicus
FBgn0038474	mRpS11	100	39.801	ENSRBIG00000035902	MRPS11	62	50.833	Rhinopithecus_bieti
FBgn0038474	mRpS11	100	39.801	ENSRROG00000032838	MRPS11	62	50.833	Rhinopithecus_roxellana
FBgn0038474	mRpS11	76	43.871	ENSSBOG00000032874	MRPS11	78	45.333	Saimiri_boliviensis_boliviensis
FBgn0038474	mRpS11	55	49.091	ENSSHAG00000000058	-	86	49.091	Sarcophilus_harrisii
FBgn0038474	mRpS11	70	47.183	ENSSFOG00015023615	mrps11	73	47.183	Scleropages_formosus
FBgn0038474	mRpS11	58	55.172	ENSSMAG00000010954	mrps11	61	55.172	Scophthalmus_maximus
FBgn0038474	mRpS11	59	54.237	ENSSDUG00000008450	mrps11	66	54.237	Seriola_dumerili
FBgn0038474	mRpS11	59	54.237	ENSSLDG00000015652	mrps11	60	54.237	Seriola_lalandi_dorsalis
FBgn0038474	mRpS11	66	51.515	ENSSPUG00000012009	MRPS11	73	51.515	Sphenodon_punctatus
FBgn0038474	mRpS11	59	54.237	ENSSPAG00000017107	mrps11	61	54.237	Stegastes_partitus
FBgn0038474	mRpS11	66	49.242	ENSSSCG00000037343	MRPS11	67	49.242	Sus_scrofa
FBgn0038474	mRpS11	60	50.000	ENSTGUG00000008345	MRPS11	92	50.000	Taeniopygia_guttata
FBgn0038474	mRpS11	59	54.237	ENSTRUG00000020346	mrps11	61	54.237	Takifugu_rubripes
FBgn0038474	mRpS11	58	56.034	ENSTNIG00000011909	mrps11	54	56.034	Tetraodon_nigroviridis
FBgn0038474	mRpS11	50	50.495	ENSTTRG00000008703	MRPS11	57	50.495	Tursiops_truncatus
FBgn0038474	mRpS11	60	52.066	ENSUAMG00000019059	MRPS11	61	52.066	Ursus_americanus
FBgn0038474	mRpS11	60	52.066	ENSUMAG00000006261	MRPS11	62	52.066	Ursus_maritimus
FBgn0038474	mRpS11	60	50.833	ENSVVUG00000012046	-	61	50.833	Vulpes_vulpes
FBgn0038474	mRpS11	60	50.833	ENSXETG00000007593	mrps11	62	50.833	Xenopus_tropicalis
FBgn0038474	mRpS11	60	53.333	ENSXCOG00000018085	mrps11	74	53.333	Xiphophorus_couchianus
FBgn0038474	mRpS11	59	54.237	ENSXMAG00000011607	mrps11	61	54.237	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279123.11402041.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	11279123.11402041.	ISS	Component
GO:0005763	mitochondrial small ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	21873635.	IBA	Process
GO:0006412	translation	11279123.	ISS	Process
GO:0032543	mitochondrial translation	11402041.	ISS	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process
GO:0048027	mRNA 5'-UTR binding	21873635.	IBA	Function
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function