EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0038548 (Gene tree)
Gene ID: 42142
Gene Symbol: CG17806
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1719 bases
Position: chr3R:17801542-17803260
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082951	zf-C2H2	PF00096.26	3.4e-12	1	2
FBpp0082951	zf-C2H2	PF00096.26	3.4e-12	2	2
FBpp0082951	zf-met	PF12874.7	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083527	-	1613	-	FBpp0082951	421 (aa)	-	Q9VEF3

Gene Model

Click here to download FBgn0038548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0038548	CG17806	94	30.702	FBgn0037877	CG6689	70	30.702
FBgn0038548	CG17806	56	41.916	FBgn0038549	CG17802	54	41.916
FBgn0038548	CG17806	62	34.752	FBgn0038301	CG6654	61	34.752
FBgn0038548	CG17806	97	38.608	FBgn0037618	ouib	99	38.608
FBgn0038548	CG17806	51	30.714	FBgn0264744	CG44002	79	30.714
FBgn0038548	CG17806	95	32.867	FBgn0051388	CG31388	95	32.867

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000976	transcription regulatory region sequence-specific DNA binding	-	ISS	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	-	ISS	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0043565	sequence-specific DNA binding	21873635.	IBA	Function
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045893	positive regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process