EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0038549 (Gene tree)
Gene ID: 42143
Gene Symbol: CG17802
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2025 bases
Position: chr3R:17803225-17805249
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082950	zf-C2H2	PF00096.26	4.9e-12	1	2
FBpp0082950	zf-C2H2	PF00096.26	4.9e-12	2	2
FBpp0082950	zf-met	PF12874.7	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083526	-	1706	-	FBpp0082950	439 (aa)	-	Q8SX40

Gene Model

Click here to download FBgn0038549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0038549	CG17802	50	30.405	FBgn0030010	CG10959	63	30.405
FBgn0038549	CG17802	95	30.216	FBgn0264744	CG44002	68	35.135
FBgn0038549	CG17802	54	41.916	FBgn0038548	CG17806	56	41.916
FBgn0038549	CG17802	57	36.054	FBgn0037923	CG6813	82	38.095
FBgn0038549	CG17802	53	30.612	FBgn0052772	CG32772	58	32.117
FBgn0038549	CG17802	95	35.417	FBgn0037618	ouib	81	39.286
FBgn0038549	CG17802	54	34.426	FBgn0037619	CG8159	66	36.232
FBgn0038549	CG17802	59	34.234	FBgn0051388	CG31388	60	34.234

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000976	transcription regulatory region sequence-specific DNA binding	-	ISS	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0006355	regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0006355	regulation of transcription, DNA-templated	-	ISS	Process
GO:0008270	zinc ion binding	-	IEA	Function