EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038765 (Gene tree)
Gene ID: 42390
Gene Symbol: CG4424
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1554 bases
Position: chr3R:20026487-20028040
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0083250	zf-C2H2	PF00096.26	3.9e-22	1	5
FBpp0083250	zf-C2H2	PF00096.26	3.9e-22	2	5
FBpp0083250	zf-C2H2	PF00096.26	3.9e-22	3	5
FBpp0083250	zf-C2H2	PF00096.26	3.9e-22	4	5
FBpp0083250	zf-C2H2	PF00096.26	3.9e-22	5	5
FBpp0083250	zf-met	PF12874.7	3e-08	1	2
FBpp0083250	zf-met	PF12874.7	3e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083841	-	1258	-	FBpp0083250	345 (aa)	-	Q8T026

Gene Model

Click here to download FBgn0038765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038765's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0038765	CG4424	72	35.556	FBgn0000520	dwg	53	38.168
FBgn0038765	CG4424	52	40.741	FBgn0037120	CG11247	60	40.741
FBgn0038765	CG4424	91	36.364	FBgn0037922	CG14711	98	58.088
FBgn0038765	CG4424	95	36.842	FBgn0037877	CG6689	73	36.937
FBgn0038765	CG4424	94	40.367	FBgn0029928	CG3032	98	40.367
FBgn0038765	CG4424	92	32.857	FBgn0051388	CG31388	95	33.333
FBgn0038765	CG4424	55	35.115	FBgn0030010	CG10959	51	35.772
FBgn0038765	CG4424	94	43.269	FBgn0037722	CG8319	99	43.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038765	CG4424	52	41.135	ENSACIG00000016117	-	82	41.135	Amphilophus_citrinellus
FBgn0038765	CG4424	65	44.444	ENSAPEG00000010602	-	97	44.444	Amphiprion_percula
FBgn0038765	CG4424	56	45.614	ENSBTAG00000053591	-	97	45.255	Bos_taurus
FBgn0038765	CG4424	70	43.704	ENSCVAG00000012216	-	81	45.455	Cyprinodon_variegatus
FBgn0038765	CG4424	55	45.926	ENSCVAG00000001369	-	73	45.926	Cyprinodon_variegatus
FBgn0038765	CG4424	89	46.429	ENSEBUG00000004844	-	59	46.429	Eptatretus_burgeri
FBgn0038765	CG4424	59	40.458	ENSEBUG00000009330	-	61	43.077	Eptatretus_burgeri
FBgn0038765	CG4424	50	43.511	ENSEBUG00000007143	-	64	43.511	Eptatretus_burgeri
FBgn0038765	CG4424	52	44.275	ENSEBUG00000006112	-	73	44.275	Eptatretus_burgeri
FBgn0038765	CG4424	66	45.113	ENSEBUG00000006092	-	59	44.037	Eptatretus_burgeri
FBgn0038765	CG4424	89	44.961	ENSEBUG00000008039	-	68	44.961	Eptatretus_burgeri
FBgn0038765	CG4424	73	40.458	ENSELUG00000013311	-	66	40.458	Esox_lucius
FBgn0038765	CG4424	63	41.353	ENSFHEG00000021772	-	88	41.667	Fundulus_heteroclitus
FBgn0038765	CG4424	70	41.045	ENSFHEG00000013460	-	90	41.045	Fundulus_heteroclitus
FBgn0038765	CG4424	54	45.865	ENSFHEG00000000851	-	99	45.865	Fundulus_heteroclitus
FBgn0038765	CG4424	55	42.857	ENSFHEG00000019953	-	81	42.857	Fundulus_heteroclitus
FBgn0038765	CG4424	54	44.444	ENSFHEG00000012468	-	95	44.444	Fundulus_heteroclitus
FBgn0038765	CG4424	50	39.695	ENSFHEG00000013735	-	80	38.462	Fundulus_heteroclitus
FBgn0038765	CG4424	51	43.511	ENSFHEG00000011944	-	93	42.742	Fundulus_heteroclitus
FBgn0038765	CG4424	63	42.105	ENSGAFG00000014097	-	69	42.105	Gambusia_affinis
FBgn0038765	CG4424	68	45.455	ENSGAFG00000012035	-	86	47.244	Gambusia_affinis
FBgn0038765	CG4424	66	40.152	ENSGAFG00000013452	-	68	40.152	Gambusia_affinis
FBgn0038765	CG4424	67	44.776	ENSGAFG00000013677	-	84	44.776	Gambusia_affinis
FBgn0038765	CG4424	69	41.985	ENSGAFG00000013616	-	89	41.985	Gambusia_affinis
FBgn0038765	CG4424	58	40.323	ENSGAFG00000013408	-	89	40.323	Gambusia_affinis
FBgn0038765	CG4424	52	33.544	ENSHBUG00000014494	-	70	33.544	Haplochromis_burtoni
FBgn0038765	CG4424	62	43.284	ENSHCOG00000008168	-	97	41.176	Hippocampus_comes
FBgn0038765	CG4424	51	44.961	ENSHCOG00000020909	-	78	44.961	Hippocampus_comes
FBgn0038765	CG4424	71	42.105	ENSHCOG00000019541	-	57	43.182	Hippocampus_comes
FBgn0038765	CG4424	65	40.741	ENSHCOG00000007485	-	93	43.182	Hippocampus_comes
FBgn0038765	CG4424	52	44.776	ENSHCOG00000007664	-	97	45.968	Hippocampus_comes
FBgn0038765	CG4424	57	36.364	ENSKMAG00000003121	-	77	39.855	Kryptolebias_marmoratus
FBgn0038765	CG4424	63	35.211	ENSMALG00000012056	-	80	39.726	Monopterus_albus
FBgn0038765	CG4424	50	38.525	ENSMLUG00000003468	-	98	39.167	Myotis_lucifugus
FBgn0038765	CG4424	59	46.667	ENSORLG00020017483	-	86	46.667	Oryzias_latipes_hni
FBgn0038765	CG4424	64	45.370	ENSORLG00015014015	-	89	45.455	Oryzias_latipes_hsok
FBgn0038765	CG4424	59	47.143	ENSOMEG00000023744	-	96	47.143	Oryzias_melastigma
FBgn0038765	CG4424	68	45.614	ENSOMEG00000022915	-	94	45.985	Oryzias_melastigma
FBgn0038765	CG4424	52	37.762	ENSPKIG00000008355	-	59	38.462	Paramormyrops_kingsleyae
FBgn0038765	CG4424	50	44.118	ENSPMGG00000009234	-	73	44.118	Periophthalmus_magnuspinnatus
FBgn0038765	CG4424	55	48.598	ENSPMGG00000004183	-	91	42.537	Periophthalmus_magnuspinnatus
FBgn0038765	CG4424	52	43.636	ENSPMGG00000011056	-	82	46.739	Periophthalmus_magnuspinnatus
FBgn0038765	CG4424	59	42.222	ENSPMGG00000018331	-	82	43.651	Periophthalmus_magnuspinnatus
FBgn0038765	CG4424	50	42.553	ENSPMGG00000004360	-	99	42.553	Periophthalmus_magnuspinnatus
FBgn0038765	CG4424	65	43.939	ENSPFOG00000018784	-	100	42.424	Poecilia_formosa
FBgn0038765	CG4424	67	39.259	ENSPFOG00000018580	-	99	40.909	Poecilia_formosa
FBgn0038765	CG4424	51	42.342	ENSPFOG00000024593	-	63	42.342	Poecilia_formosa
FBgn0038765	CG4424	68	44.275	ENSPFOG00000018776	-	99	43.511	Poecilia_formosa
FBgn0038765	CG4424	66	41.045	ENSPFOG00000024133	-	66	41.353	Poecilia_formosa
FBgn0038765	CG4424	63	41.045	ENSPFOG00000023528	-	66	41.045	Poecilia_formosa
FBgn0038765	CG4424	59	38.636	ENSPFOG00000023476	-	69	38.636	Poecilia_formosa
FBgn0038765	CG4424	62	39.535	ENSPLAG00000017005	-	82	39.773	Poecilia_latipinna
FBgn0038765	CG4424	50	40.580	ENSPLAG00000020760	-	70	40.136	Poecilia_latipinna
FBgn0038765	CG4424	65	38.636	ENSPLAG00000016384	-	79	39.695	Poecilia_latipinna
FBgn0038765	CG4424	68	41.985	ENSPLAG00000008557	-	66	41.985	Poecilia_latipinna
FBgn0038765	CG4424	60	39.850	ENSPLAG00000016591	-	71	42.000	Poecilia_latipinna
FBgn0038765	CG4424	59	38.931	ENSPLAG00000016585	-	62	40.441	Poecilia_latipinna
FBgn0038765	CG4424	69	48.333	ENSPLAG00000010234	-	91	46.512	Poecilia_latipinna
FBgn0038765	CG4424	68	44.697	ENSPLAG00000010230	-	82	44.697	Poecilia_latipinna
FBgn0038765	CG4424	52	44.776	ENSPMEG00000011756	-	83	43.885	Poecilia_mexicana
FBgn0038765	CG4424	63	42.105	ENSPMEG00000022722	-	84	42.105	Poecilia_mexicana
FBgn0038765	CG4424	56	38.931	ENSPMEG00000020849	-	59	38.931	Poecilia_mexicana
FBgn0038765	CG4424	63	39.231	ENSPMEG00000021130	-	89	42.188	Poecilia_mexicana
FBgn0038765	CG4424	61	38.931	ENSPREG00000013727	-	64	39.706	Poecilia_reticulata
FBgn0038765	CG4424	57	40.580	ENSPREG00000014477	-	95	41.176	Poecilia_reticulata
FBgn0038765	CG4424	64	41.481	ENSPREG00000013699	-	62	41.791	Poecilia_reticulata
FBgn0038765	CG4424	68	41.045	ENSPREG00000012539	-	66	41.353	Poecilia_reticulata
FBgn0038765	CG4424	69	45.455	ENSPREG00000002637	-	80	45.872	Poecilia_reticulata
FBgn0038765	CG4424	63	45.455	ENSPREG00000002181	-	94	45.385	Poecilia_reticulata
FBgn0038765	CG4424	62	41.985	ENSPREG00000014340	-	86	41.985	Poecilia_reticulata
FBgn0038765	CG4424	68	43.511	ENSPREG00000014360	-	63	43.511	Poecilia_reticulata
FBgn0038765	CG4424	50	42.759	ENSPREG00000014945	-	97	42.446	Poecilia_reticulata
FBgn0038765	CG4424	56	40.385	ENSXCOG00000003538	-	100	40.833	Xiphophorus_couchianus
FBgn0038765	CG4424	62	39.231	ENSXCOG00000012921	-	93	37.600	Xiphophorus_couchianus
FBgn0038765	CG4424	67	42.857	ENSXCOG00000003472	-	86	42.857	Xiphophorus_couchianus
FBgn0038765	CG4424	66	40.458	ENSXMAG00000026295	-	91	40.458	Xiphophorus_maculatus
FBgn0038765	CG4424	62	38.806	ENSXMAG00000023947	-	69	38.806	Xiphophorus_maculatus
FBgn0038765	CG4424	60	38.806	ENSXMAG00000024945	-	60	38.806	Xiphophorus_maculatus
FBgn0038765	CG4424	54	40.506	ENSXMAG00000023392	-	85	40.769	Xiphophorus_maculatus
FBgn0038765	CG4424	58	39.695	ENSXMAG00000027682	-	71	42.857	Xiphophorus_maculatus
FBgn0038765	CG4424	60	39.706	ENSXMAG00000028040	-	90	42.424	Xiphophorus_maculatus
FBgn0038765	CG4424	68	41.667	ENSXMAG00000014585	-	75	41.667	Xiphophorus_maculatus
FBgn0038765	CG4424	62	40.152	ENSXMAG00000024701	-	72	40.152	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000976	transcription regulatory region sequence-specific DNA binding	-	ISS	Function
GO:0003700	DNA-binding transcription factor activity	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0006355	regulation of transcription, DNA-templated	-	ISS	Process
GO:0008270	zinc ion binding	-	IEA	Function