EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038772 (Gene tree)
Gene ID: 42397
Gene Symbol: mdlc
Alias: -
Full Name: midlife crisis
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1544 bases
Position: chr3R:20057748-20059291
Accession: FBgn0038772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0083244	zf-CCCH	PF00642.24	1.8e-09	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083835	-	1419	-	FBpp0083244	357 (aa)	-	A0ANM3

Gene Model

Click here to download FBgn0038772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038772's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038772	mdlc	89	48.589	ENSG00000139797	RNF113B	94	47.649	Homo_sapiens
FBgn0038772	mdlc	87	58.095	ENSG00000125352	RNF113A	88	58.280	Homo_sapiens
FBgn0038772	mdlc	93	56.973	ENSAPOG00000017510	rnf113a	93	58.360	Acanthochromis_polyacanthus
FBgn0038772	mdlc	87	57.006	ENSAMEG00000019845	-	89	57.188	Ailuropoda_melanoleuca
FBgn0038772	mdlc	63	61.062	ENSACIG00000007458	rnf113a	71	60.965	Amphilophus_citrinellus
FBgn0038772	mdlc	93	55.988	ENSAOCG00000003485	rnf113a	94	57.547	Amphiprion_ocellaris
FBgn0038772	mdlc	92	56.325	ENSAPEG00000001084	rnf113a	93	57.911	Amphiprion_percula
FBgn0038772	mdlc	89	56.875	ENSATEG00000022950	rnf113a	93	56.467	Anabas_testudineus
FBgn0038772	mdlc	66	66.946	ENSAPLG00000012510	-	83	68.421	Anas_platyrhynchos
FBgn0038772	mdlc	88	56.962	ENSACAG00000012485	-	96	58.786	Anolis_carolinensis
FBgn0038772	mdlc	88	55.873	ENSANAG00000024332	-	93	56.918	Aotus_nancymaae
FBgn0038772	mdlc	89	48.276	ENSANAG00000020431	RNF113B	94	47.962	Aotus_nancymaae
FBgn0038772	mdlc	88	57.460	ENSANAG00000013925	-	90	57.278	Aotus_nancymaae
FBgn0038772	mdlc	91	56.881	ENSACLG00000025256	rnf113a	93	58.544	Astatotilapia_calliptera
FBgn0038772	mdlc	89	56.604	ENSAMXG00000011273	rnf113a	94	57.547	Astyanax_mexicanus
FBgn0038772	mdlc	87	57.692	ENSBTAG00000006034	RNF113A	88	58.199	Bos_taurus
FBgn0038772	mdlc	87	54.232	ENSBTAG00000008684	-	89	55.031	Bos_taurus
FBgn0038772	mdlc	85	48.052	WBGene00010476	rnf-113	81	44.606	Caenorhabditis_elegans
FBgn0038772	mdlc	88	56.825	ENSCJAG00000022327	RNF113A	90	56.646	Callithrix_jacchus
FBgn0038772	mdlc	67	59.244	ENSCJAG00000004501	RNF113B	94	50.156	Callithrix_jacchus
FBgn0038772	mdlc	77	55.000	ENSCAFG00000018373	-	89	51.899	Canis_familiaris
FBgn0038772	mdlc	87	57.143	ENSCAFG00000018430	-	89	57.643	Canis_familiaris
FBgn0038772	mdlc	76	55.596	ENSCAFG00020020280	-	89	52.215	Canis_lupus_dingo
FBgn0038772	mdlc	87	57.143	ENSCAFG00020004044	-	89	57.643	Canis_lupus_dingo
FBgn0038772	mdlc	87	58.013	ENSCHIG00000018820	-	88	58.521	Capra_hircus
FBgn0038772	mdlc	88	57.006	ENSCHIG00000015616	-	88	56.913	Capra_hircus
FBgn0038772	mdlc	88	57.460	ENSTSYG00000001308	RNF113A	90	57.680	Carlito_syrichta
FBgn0038772	mdlc	89	57.547	ENSCPOG00000038517	-	92	56.740	Cavia_porcellus
FBgn0038772	mdlc	88	57.460	ENSCCAG00000013617	RNF113A	90	57.278	Cebus_capucinus
FBgn0038772	mdlc	64	61.135	ENSCCAG00000021327	RNF113B	94	49.530	Cebus_capucinus
FBgn0038772	mdlc	88	57.862	ENSCATG00000002702	RNF113A	90	57.680	Cercocebus_atys
FBgn0038772	mdlc	88	58.044	ENSCLAG00000017479	-	90	58.125	Chinchilla_lanigera
FBgn0038772	mdlc	89	49.221	ENSCSAG00000000222	RNF113B	90	50.156	Chlorocebus_sabaeus
FBgn0038772	mdlc	89	50.629	ENSCSAG00000019472	-	90	51.572	Chlorocebus_sabaeus
FBgn0038772	mdlc	73	54.406	ENSCHOG00000008711	-	94	54.789	Choloepus_hoffmanni
FBgn0038772	mdlc	93	59.403	ENSCPBG00000026980	-	100	56.734	Chrysemys_picta_bellii
FBgn0038772	mdlc	89	50.938	ENSCING00000009197	-	95	52.174	Ciona_intestinalis
FBgn0038772	mdlc	64	62.882	ENSCSAVG00000006210	-	96	52.615	Ciona_savignyi
FBgn0038772	mdlc	89	48.113	ENSCANG00000041552	RNF113B	94	49.057	Colobus_angolensis_palliatus
FBgn0038772	mdlc	88	57.862	ENSCANG00000037715	RNF113A	90	57.680	Colobus_angolensis_palliatus
FBgn0038772	mdlc	88	56.190	ENSCGRG00001002251	Rnf113a1	89	57.098	Cricetulus_griseus_chok1gshd
FBgn0038772	mdlc	88	56.782	ENSCGRG00000016675	Rnf113a2	91	57.233	Cricetulus_griseus_crigri
FBgn0038772	mdlc	88	55.873	ENSCGRG00000019441	Rnf113a1	89	56.782	Cricetulus_griseus_crigri
FBgn0038772	mdlc	88	58.360	ENSCSEG00000021570	rnf113a	80	58.280	Cynoglossus_semilaevis
FBgn0038772	mdlc	87	58.730	ENSCVAG00000011305	rnf113a	92	58.013	Cyprinodon_variegatus
FBgn0038772	mdlc	93	56.456	ENSDARG00000037930	rnf113a	92	58.333	Danio_rerio
FBgn0038772	mdlc	89	55.799	ENSDORG00000027624	Rnf113a2	91	55.380	Dipodomys_ordii
FBgn0038772	mdlc	89	56.467	ENSETEG00000018346	-	90	56.740	Echinops_telfairi
FBgn0038772	mdlc	92	54.819	ENSEBUG00000016079	rnf113a	91	55.911	Eptatretus_burgeri
FBgn0038772	mdlc	89	56.426	ENSEASG00005010538	-	90	56.250	Equus_asinus_asinus
FBgn0038772	mdlc	89	56.386	ENSECAG00000004638	-	97	56.386	Equus_caballus
FBgn0038772	mdlc	89	56.426	ENSECAG00000003934	-	88	57.878	Equus_caballus
FBgn0038772	mdlc	89	57.233	ENSELUG00000020657	rnf113a	94	56.918	Esox_lucius
FBgn0038772	mdlc	89	56.250	ENSFCAG00000028962	-	88	57.372	Felis_catus
FBgn0038772	mdlc	87	56.410	ENSFCAG00000024392	-	86	57.878	Felis_catus
FBgn0038772	mdlc	87	56.731	ENSFCAG00000025700	-	88	58.199	Felis_catus
FBgn0038772	mdlc	80	60.976	ENSFALG00000004633	-	90	60.702	Ficedula_albicollis
FBgn0038772	mdlc	89	57.321	ENSFHEG00000023305	rnf113a	94	57.233	Fundulus_heteroclitus
FBgn0038772	mdlc	89	57.585	ENSGMOG00000004541	rnf113a	94	56.966	Gadus_morhua
FBgn0038772	mdlc	89	59.875	ENSGALG00000000538	RNF113A	93	59.688	Gallus_gallus
FBgn0038772	mdlc	93	56.845	ENSGAFG00000011863	rnf113a	93	57.547	Gambusia_affinis
FBgn0038772	mdlc	93	55.193	ENSGACG00000009738	rnf113a	94	55.799	Gasterosteus_aculeatus
FBgn0038772	mdlc	93	58.982	ENSGAGG00000020490	-	100	55.874	Gopherus_agassizii
FBgn0038772	mdlc	87	58.095	ENSGGOG00000002324	RNF113A	88	58.280	Gorilla_gorilla
FBgn0038772	mdlc	89	48.903	ENSGGOG00000023052	RNF113B	94	48.276	Gorilla_gorilla
FBgn0038772	mdlc	91	56.575	ENSHBUG00000008626	rnf113a	93	58.228	Haplochromis_burtoni
FBgn0038772	mdlc	96	55.425	ENSHGLG00000019571	-	89	58.095	Heterocephalus_glaber_female
FBgn0038772	mdlc	96	53.488	ENSHGLG00100019582	-	90	57.053	Heterocephalus_glaber_male
FBgn0038772	mdlc	92	57.357	ENSHCOG00000003421	rnf113a	92	57.372	Hippocampus_comes
FBgn0038772	mdlc	89	57.764	ENSIPUG00000013431	RNF113A	94	57.233	Ictalurus_punctatus
FBgn0038772	mdlc	88	57.460	ENSSTOG00000019866	-	90	57.278	Ictidomys_tridecemlineatus
FBgn0038772	mdlc	61	49.083	ENSJJAG00000019849	Rnf113a1	69	51.741	Jaculus_jaculus
FBgn0038772	mdlc	89	58.044	ENSKMAG00000009830	rnf113a	93	58.675	Kryptolebias_marmoratus
FBgn0038772	mdlc	87	57.419	ENSLBEG00000004627	rnf113a	91	58.065	Labrus_bergylta
FBgn0038772	mdlc	93	56.456	ENSLACG00000013178	rnf113a	93	58.675	Latimeria_chalumnae
FBgn0038772	mdlc	92	58.104	ENSLOCG00000011785	rnf113a	94	59.248	Lepisosteus_oculatus
FBgn0038772	mdlc	88	56.825	ENSLAFG00000013906	-	89	57.143	Loxodonta_africana
FBgn0038772	mdlc	88	57.862	ENSMFAG00000018472	RNF113A	90	57.680	Macaca_fascicularis
FBgn0038772	mdlc	88	57.862	ENSMMUG00000020223	RNF113A	90	57.680	Macaca_mulatta
FBgn0038772	mdlc	88	57.862	ENSMNEG00000019778	RNF113A	90	57.680	Macaca_nemestrina
FBgn0038772	mdlc	88	57.862	ENSMLEG00000020750	RNF113A	90	57.680	Mandrillus_leucophaeus
FBgn0038772	mdlc	64	59.389	ENSMLEG00000038757	RNF113B	75	59.912	Mandrillus_leucophaeus
FBgn0038772	mdlc	93	56.156	ENSMAMG00000021895	rnf113a	94	57.547	Mastacembelus_armatus
FBgn0038772	mdlc	91	56.881	ENSMZEG00005023086	rnf113a	93	58.544	Maylandia_zebra
FBgn0038772	mdlc	76	62.319	ENSMGAG00000001753	-	91	61.455	Meleagris_gallopavo
FBgn0038772	mdlc	88	56.508	ENSMICG00000038084	-	90	56.646	Microcebus_murinus
FBgn0038772	mdlc	88	57.595	ENSMICG00000001750	-	90	57.413	Microcebus_murinus
FBgn0038772	mdlc	88	57.460	ENSMOCG00000005370	-	87	57.547	Microtus_ochrogaster
FBgn0038772	mdlc	88	57.233	ENSMMOG00000016954	rnf113a	93	57.643	Mola_mola
FBgn0038772	mdlc	92	52.553	ENSMALG00000007938	rnf113a	92	54.459	Monopterus_albus
FBgn0038772	mdlc	87	57.325	MGP_CAROLIEiJ_G0017943	Rnf113a2	90	57.460	Mus_caroli
FBgn0038772	mdlc	87	57.325	ENSMUSG00000098134	Rnf113a2	90	57.460	Mus_musculus
FBgn0038772	mdlc	87	57.051	ENSMUSG00000036537	Rnf113a1	88	58.013	Mus_musculus
FBgn0038772	mdlc	87	57.006	MGP_PahariEiJ_G0029702	Rnf113a2	90	57.460	Mus_pahari
FBgn0038772	mdlc	87	56.731	MGP_PahariEiJ_G0031547	Rnf113a1	88	56.731	Mus_pahari
FBgn0038772	mdlc	87	57.051	MGP_SPRETEiJ_G0034156	Rnf113a1	88	58.013	Mus_spretus
FBgn0038772	mdlc	87	57.325	MGP_SPRETEiJ_G0018788	Rnf113a2	90	57.460	Mus_spretus
FBgn0038772	mdlc	89	55.799	ENSMPUG00000019358	-	90	56.698	Mustela_putorius_furo
FBgn0038772	mdlc	93	54.328	ENSMLUG00000010856	-	89	56.410	Myotis_lucifugus
FBgn0038772	mdlc	87	55.873	ENSMLUG00000016812	-	88	56.646	Myotis_lucifugus
FBgn0038772	mdlc	91	57.187	ENSNBRG00000004314	rnf113a	93	58.544	Neolamprologus_brichardi
FBgn0038772	mdlc	89	47.962	ENSNLEG00000007844	RNF113B	94	48.589	Nomascus_leucogenys
FBgn0038772	mdlc	88	57.778	ENSNLEG00000018333	RNF113A	90	57.595	Nomascus_leucogenys
FBgn0038772	mdlc	88	54.890	ENSMEUG00000001855	-	94	57.276	Notamacropus_eugenii
FBgn0038772	mdlc	91	56.269	ENSONIG00000000741	rnf113a	93	57.911	Oreochromis_niloticus
FBgn0038772	mdlc	89	54.321	ENSOANG00000002592	-	88	56.592	Ornithorhynchus_anatinus
FBgn0038772	mdlc	87	58.654	ENSOCUG00000016207	-	88	59.164	Oryctolagus_cuniculus
FBgn0038772	mdlc	89	58.438	ENSORLG00000002442	rnf113a	94	58.044	Oryzias_latipes
FBgn0038772	mdlc	89	58.438	ENSORLG00020011512	rnf113a	94	58.044	Oryzias_latipes_hni
FBgn0038772	mdlc	89	58.438	ENSORLG00015004382	rnf113a	94	58.044	Oryzias_latipes_hsok
FBgn0038772	mdlc	89	58.750	ENSOMEG00000020197	rnf113a	93	58.675	Oryzias_melastigma
FBgn0038772	mdlc	88	57.278	ENSOGAG00000011638	RNF113B	90	56.646	Otolemur_garnettii
FBgn0038772	mdlc	88	56.825	ENSOGAG00000031602	RNF113A	90	56.918	Otolemur_garnettii
FBgn0038772	mdlc	87	58.013	ENSOARG00000009771	-	88	58.521	Ovis_aries
FBgn0038772	mdlc	88	55.836	ENSOARG00000015294	-	88	55.732	Ovis_aries
FBgn0038772	mdlc	89	48.903	ENSPPAG00000040641	RNF113B	94	48.276	Pan_paniscus
FBgn0038772	mdlc	87	58.095	ENSPPAG00000009537	RNF113A	88	58.280	Pan_paniscus
FBgn0038772	mdlc	89	56.740	ENSPPRG00000020640	-	88	57.235	Panthera_pardus
FBgn0038772	mdlc	87	56.731	ENSPPRG00000011512	-	88	58.199	Panthera_pardus
FBgn0038772	mdlc	87	56.731	ENSPTIG00000007986	-	88	58.199	Panthera_tigris_altaica
FBgn0038772	mdlc	89	48.903	ENSPTRG00000005987	RNF113B	94	48.276	Pan_troglodytes
FBgn0038772	mdlc	87	58.095	ENSPTRG00000022231	RNF113A	88	58.280	Pan_troglodytes
FBgn0038772	mdlc	88	57.862	ENSPANG00000011522	RNF113A	90	57.680	Papio_anubis
FBgn0038772	mdlc	93	55.389	ENSPKIG00000016796	rnf113a	94	56.740	Paramormyrops_kingsleyae
FBgn0038772	mdlc	84	60.197	ENSPSIG00000012676	-	94	61.189	Pelodiscus_sinensis
FBgn0038772	mdlc	93	55.522	ENSPMGG00000009668	rnf113a	93	56.467	Periophthalmus_magnuspinnatus
FBgn0038772	mdlc	88	57.098	ENSPEMG00000002490	Rnf113a1	89	58.413	Peromyscus_maniculatus_bairdii
FBgn0038772	mdlc	82	58.725	ENSPMAG00000005184	rnf113a	92	58.451	Petromyzon_marinus
FBgn0038772	mdlc	91	55.362	ENSPCIG00000028916	-	90	57.276	Phascolarctos_cinereus
FBgn0038772	mdlc	93	55.255	ENSPFOG00000014248	rnf113a	94	57.862	Poecilia_formosa
FBgn0038772	mdlc	89	56.918	ENSPLAG00000010435	rnf113a	94	57.862	Poecilia_latipinna
FBgn0038772	mdlc	93	56.456	ENSPMEG00000010641	rnf113a	94	57.862	Poecilia_mexicana
FBgn0038772	mdlc	93	56.548	ENSPREG00000009900	rnf113a	93	58.176	Poecilia_reticulata
FBgn0038772	mdlc	89	48.276	ENSPPYG00000005460	RNF113B	95	48.903	Pongo_abelii
FBgn0038772	mdlc	88	58.176	ENSPPYG00000020676	RNF113A	90	57.994	Pongo_abelii
FBgn0038772	mdlc	89	56.918	ENSPCAG00000014633	-	90	56.918	Procavia_capensis
FBgn0038772	mdlc	93	52.381	ENSPCOG00000005671	-	89	55.000	Propithecus_coquereli
FBgn0038772	mdlc	91	56.881	ENSPNYG00000013863	rnf113a	93	58.544	Pundamilia_nyererei
FBgn0038772	mdlc	89	57.367	ENSPNAG00000017428	rnf113a	94	58.621	Pygocentrus_nattereri
FBgn0038772	mdlc	87	57.692	ENSRNOG00000034040	LOC108348079	88	58.013	Rattus_norvegicus
FBgn0038772	mdlc	87	57.692	ENSRNOG00000059412	Rnf113a1	88	58.013	Rattus_norvegicus
FBgn0038772	mdlc	64	59.825	ENSRBIG00000036094	RNF113B	94	50.156	Rhinopithecus_bieti
FBgn0038772	mdlc	88	57.862	ENSRBIG00000017389	RNF113A	90	57.680	Rhinopithecus_bieti
FBgn0038772	mdlc	88	57.862	ENSRROG00000012149	RNF113A	90	57.680	Rhinopithecus_roxellana
FBgn0038772	mdlc	64	59.389	ENSRROG00000045661	RNF113B	94	49.844	Rhinopithecus_roxellana
FBgn0038772	mdlc	87	57.372	ENSSBOG00000017704	RNF113A	88	57.556	Saimiri_boliviensis_boliviensis
FBgn0038772	mdlc	64	61.572	ENSSBOG00000029719	RNF113B	94	49.843	Saimiri_boliviensis_boliviensis
FBgn0038772	mdlc	90	54.839	ENSSHAG00000008839	-	89	56.740	Sarcophilus_harrisii
FBgn0038772	mdlc	93	55.988	ENSSFOG00015016567	rnf113a	93	57.098	Scleropages_formosus
FBgn0038772	mdlc	89	56.467	ENSSMAG00000009235	rnf113a	93	56.782	Scophthalmus_maximus
FBgn0038772	mdlc	89	58.044	ENSSDUG00000022244	rnf113a	93	58.044	Seriola_dumerili
FBgn0038772	mdlc	89	58.044	ENSSLDG00000018582	rnf113a	93	58.044	Seriola_lalandi_dorsalis
FBgn0038772	mdlc	92	54.217	ENSSARG00000010436	-	90	57.278	Sorex_araneus
FBgn0038772	mdlc	97	58.046	ENSSPUG00000018786	-	85	59.621	Sphenodon_punctatus
FBgn0038772	mdlc	92	56.667	ENSSPAG00000013187	rnf113a	93	58.280	Stegastes_partitus
FBgn0038772	mdlc	87	55.128	ENSSSCG00000032973	-	88	56.913	Sus_scrofa
FBgn0038772	mdlc	89	59.006	ENSTGUG00000001947	-	94	58.750	Taeniopygia_guttata
FBgn0038772	mdlc	88	57.188	ENSTRUG00000011142	rnf113a	92	58.786	Takifugu_rubripes
FBgn0038772	mdlc	88	57.643	ENSTNIG00000014938	rnf113a	92	58.280	Tetraodon_nigroviridis
FBgn0038772	mdlc	88	57.460	ENSTBEG00000012687	-	90	57.278	Tupaia_belangeri
FBgn0038772	mdlc	76	60.886	ENSUAMG00000024564	-	91	57.278	Ursus_americanus
FBgn0038772	mdlc	76	60.886	ENSUMAG00000002167	-	92	57.878	Ursus_maritimus
FBgn0038772	mdlc	79	58.451	ENSVPAG00000004521	-	88	58.451	Vicugna_pacos
FBgn0038772	mdlc	51	54.891	ENSVVUG00000004522	-	75	49.554	Vulpes_vulpes
FBgn0038772	mdlc	87	57.143	ENSVVUG00000011662	-	89	57.643	Vulpes_vulpes
FBgn0038772	mdlc	94	54.734	ENSXETG00000002042	rnf113a	95	55.799	Xenopus_tropicalis
FBgn0038772	mdlc	87	58.654	ENSXCOG00000017542	rnf113a	95	58.333	Xiphophorus_couchianus
FBgn0038772	mdlc	93	56.845	ENSXMAG00000008169	rnf113a	94	58.491	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	ISS	Process
GO:0005634	nucleus	24026126.	IDA	Component
GO:0005684	U2-type spliceosomal complex	21873635.	IBA	Component
GO:0005684	U2-type spliceosomal complex	-	ISS	Component
GO:0008270	zinc ion binding	21912646.	ISM	Function
GO:0030182	neuron differentiation	24026126.	IMP	Process
GO:0034247	snoRNA splicing	21873635.	IBA	Process
GO:0043484	regulation of RNA splicing	24026126.	IDA	Process
GO:0046872	metal ion binding	-	IEA	Function