EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038810 (Gene tree)
Gene ID: 42439
Gene Symbol: Srp72
Alias: -
Full Name: Signal recognition particle protein 72
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 2330 bases
Position: chr3R:20588711-20591040
Accession: FBgn0038810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0083319	SRP72	PF08492.12	2.8e-17	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083911	-	2149	-	FBpp0083319	650 (aa)	-	Q5BHY9

Gene Model

Click here to download FBgn0038810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038810's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038810	Srp72	94	40.931	ENSG00000174780	SRP72	99	39.005	Homo_sapiens
FBgn0038810	Srp72	94	37.400	ENSAPOG00000019438	srp72	95	37.209	Acanthochromis_polyacanthus
FBgn0038810	Srp72	94	41.214	ENSAMEG00000008469	SRP72	92	40.865	Ailuropoda_melanoleuca
FBgn0038810	Srp72	96	39.752	ENSACIG00000000488	srp72	95	39.752	Amphilophus_citrinellus
FBgn0038810	Srp72	94	40.480	ENSAOCG00000011256	srp72	95	40.185	Amphiprion_ocellaris
FBgn0038810	Srp72	96	40.185	ENSAPEG00000001512	srp72	95	40.185	Amphiprion_percula
FBgn0038810	Srp72	92	41.531	ENSATEG00000006781	srp72	98	40.946	Anabas_testudineus
FBgn0038810	Srp72	94	42.444	ENSAPLG00000008751	SRP72	93	41.956	Anas_platyrhynchos
FBgn0038810	Srp72	94	40.895	ENSACAG00000002381	SRP72	91	40.931	Anolis_carolinensis
FBgn0038810	Srp72	94	40.705	ENSANAG00000020836	-	92	40.705	Aotus_nancymaae
FBgn0038810	Srp72	96	40.649	ENSACLG00000014617	srp72	95	40.649	Astatotilapia_calliptera
FBgn0038810	Srp72	96	40.625	ENSAMXG00000004011	srp72	95	40.591	Astyanax_mexicanus
FBgn0038810	Srp72	94	41.827	ENSBTAG00000010593	SRP72	92	41.346	Bos_taurus
FBgn0038810	Srp72	95	31.181	WBGene00017245	srpa-72	95	31.181	Caenorhabditis_elegans
FBgn0038810	Srp72	94	40.705	ENSCJAG00000017998	SRP72	92	40.705	Callithrix_jacchus
FBgn0038810	Srp72	94	41.083	ENSCAFG00000002244	SRP72	92	40.865	Canis_familiaris
FBgn0038810	Srp72	94	41.083	ENSCAFG00020027338	SRP72	92	40.064	Canis_lupus_dingo
FBgn0038810	Srp72	94	41.054	ENSCHIG00000021465	SRP72	92	40.415	Capra_hircus
FBgn0038810	Srp72	94	41.346	ENSTSYG00000010571	-	92	40.865	Carlito_syrichta
FBgn0038810	Srp72	78	32.353	ENSCAPG00000016668	SRP72	84	32.353	Cavia_aperea
FBgn0038810	Srp72	94	40.865	ENSCPOG00000000218	SRP72	92	40.865	Cavia_porcellus
FBgn0038810	Srp72	94	40.902	ENSCCAG00000030683	-	92	40.902	Cebus_capucinus
FBgn0038810	Srp72	94	40.064	ENSCCAG00000030830	-	92	39.583	Cebus_capucinus
FBgn0038810	Srp72	92	34.861	ENSCATG00000045359	-	89	35.679	Cercocebus_atys
FBgn0038810	Srp72	94	40.865	ENSCATG00000008072	SRP72	92	40.865	Cercocebus_atys
FBgn0038810	Srp72	94	40.865	ENSCLAG00000003571	SRP72	92	40.865	Chinchilla_lanigera
FBgn0038810	Srp72	94	40.770	ENSCSAG00000005079	SRP72	92	40.770	Chlorocebus_sabaeus
FBgn0038810	Srp72	74	49.091	ENSCHOG00000013240	SRP72	71	49.091	Choloepus_hoffmanni
FBgn0038810	Srp72	93	40.484	ENSCPBG00000015015	SRP72	92	41.158	Chrysemys_picta_bellii
FBgn0038810	Srp72	95	37.730	ENSCING00000002417	-	93	37.577	Ciona_intestinalis
FBgn0038810	Srp72	95	37.188	ENSCSAVG00000011288	-	98	31.877	Ciona_savignyi
FBgn0038810	Srp72	94	40.865	ENSCANG00000041709	SRP72	92	40.865	Colobus_angolensis_palliatus
FBgn0038810	Srp72	95	30.137	ENSCANG00000037920	-	89	31.006	Colobus_angolensis_palliatus
FBgn0038810	Srp72	94	41.506	ENSCGRG00001013548	Srp72	92	41.026	Cricetulus_griseus_chok1gshd
FBgn0038810	Srp72	90	41.569	ENSCGRG00000003013	Srp72	92	41.000	Cricetulus_griseus_crigri
FBgn0038810	Srp72	96	40.280	ENSCSEG00000003616	srp72	95	40.280	Cynoglossus_semilaevis
FBgn0038810	Srp72	91	40.722	ENSCVAG00000001520	srp72	98	41.089	Cyprinodon_variegatus
FBgn0038810	Srp72	86	40.933	ENSDARG00000014139	srp72	96	40.933	Danio_rerio
FBgn0038810	Srp72	94	39.246	ENSDNOG00000039012	SRP72	76	39.246	Dasypus_novemcinctus
FBgn0038810	Srp72	94	41.346	ENSDORG00000000171	Srp72	93	40.472	Dipodomys_ordii
FBgn0038810	Srp72	94	41.318	ENSETEG00000005191	SRP72	92	40.705	Echinops_telfairi
FBgn0038810	Srp72	72	46.862	ENSEBUG00000003696	srp72	94	46.862	Eptatretus_burgeri
FBgn0038810	Srp72	94	41.054	ENSEASG00005017747	SRP72	92	40.770	Equus_asinus_asinus
FBgn0038810	Srp72	94	41.054	ENSECAG00000006920	SRP72	92	40.770	Equus_caballus
FBgn0038810	Srp72	95	40.532	ENSELUG00000022415	srp72	93	40.532	Esox_lucius
FBgn0038810	Srp72	94	41.083	ENSFCAG00000027600	SRP72	92	40.865	Felis_catus
FBgn0038810	Srp72	93	42.351	ENSFALG00000006713	SRP72	92	41.853	Ficedula_albicollis
FBgn0038810	Srp72	67	37.168	ENSFDAG00000009793	-	80	37.168	Fukomys_damarensis
FBgn0038810	Srp72	94	41.186	ENSFDAG00000002014	-	92	41.186	Fukomys_damarensis
FBgn0038810	Srp72	94	40.675	ENSFHEG00000017652	srp72	88	40.216	Fundulus_heteroclitus
FBgn0038810	Srp72	94	41.413	ENSGMOG00000005986	srp72	95	40.938	Gadus_morhua
FBgn0038810	Srp72	93	42.326	ENSGALG00000011403	SRP72	92	41.613	Gallus_gallus
FBgn0038810	Srp72	98	39.757	ENSGAFG00000017762	srp72	96	40.000	Gambusia_affinis
FBgn0038810	Srp72	94	41.506	ENSGACG00000016749	srp72	95	41.077	Gasterosteus_aculeatus
FBgn0038810	Srp72	84	40.860	ENSGAGG00000024611	SRP72	91	41.324	Gopherus_agassizii
FBgn0038810	Srp72	94	40.865	ENSGGOG00000013234	-	92	40.865	Gorilla_gorilla
FBgn0038810	Srp72	96	40.649	ENSHBUG00000020723	srp72	95	40.649	Haplochromis_burtoni
FBgn0038810	Srp72	94	41.346	ENSHGLG00000009791	SRP72	92	40.865	Heterocephalus_glaber_female
FBgn0038810	Srp72	82	44.595	ENSHGLG00000003950	-	86	46.269	Heterocephalus_glaber_female
FBgn0038810	Srp72	53	34.493	ENSHGLG00000010633	-	88	34.493	Heterocephalus_glaber_female
FBgn0038810	Srp72	92	34.826	ENSHGLG00000018597	-	89	34.826	Heterocephalus_glaber_female
FBgn0038810	Srp72	95	39.331	ENSHGLG00000005029	-	92	39.394	Heterocephalus_glaber_female
FBgn0038810	Srp72	94	41.346	ENSHGLG00100009021	SRP72	92	40.865	Heterocephalus_glaber_male
FBgn0038810	Srp72	82	44.144	ENSHGLG00100017133	-	86	45.771	Heterocephalus_glaber_male
FBgn0038810	Srp72	92	33.882	ENSHGLG00100009346	-	95	33.544	Heterocephalus_glaber_male
FBgn0038810	Srp72	95	39.331	ENSHGLG00100011236	-	92	39.394	Heterocephalus_glaber_male
FBgn0038810	Srp72	98	40.337	ENSHCOG00000013760	srp72	96	40.337	Hippocampus_comes
FBgn0038810	Srp72	96	40.280	ENSIPUG00000000210	srp72	95	40.312	Ictalurus_punctatus
FBgn0038810	Srp72	94	41.026	ENSSTOG00000007305	SRP72	92	41.026	Ictidomys_tridecemlineatus
FBgn0038810	Srp72	94	42.283	ENSJJAG00000018324	Srp72	92	41.667	Jaculus_jaculus
FBgn0038810	Srp72	96	39.907	ENSKMAG00000003776	srp72	95	39.907	Kryptolebias_marmoratus
FBgn0038810	Srp72	96	41.975	ENSLOCG00000002628	srp72	94	42.188	Lepisosteus_oculatus
FBgn0038810	Srp72	94	41.026	ENSLAFG00000018307	SRP72	92	40.545	Loxodonta_africana
FBgn0038810	Srp72	94	41.346	ENSMFAG00000031065	SRP72	92	40.865	Macaca_fascicularis
FBgn0038810	Srp72	92	35.750	ENSMFAG00000037164	-	91	36.409	Macaca_fascicularis
FBgn0038810	Srp72	91	30.579	ENSMMUG00000021262	-	90	31.405	Macaca_mulatta
FBgn0038810	Srp72	98	40.763	ENSMMUG00000016368	SRP72	92	40.865	Macaca_mulatta
FBgn0038810	Srp72	94	41.346	ENSMNEG00000038065	-	92	40.865	Macaca_nemestrina
FBgn0038810	Srp72	94	40.385	ENSMLEG00000030140	-	92	40.385	Mandrillus_leucophaeus
FBgn0038810	Srp72	96	40.615	ENSMAMG00000014989	srp72	84	40.528	Mastacembelus_armatus
FBgn0038810	Srp72	96	40.649	ENSMZEG00005003325	srp72	95	40.649	Maylandia_zebra
FBgn0038810	Srp72	90	40.500	ENSMGAG00000008567	SRP72	93	40.234	Meleagris_gallopavo
FBgn0038810	Srp72	94	41.801	ENSMAUG00000001237	Srp72	92	41.186	Mesocricetus_auratus
FBgn0038810	Srp72	94	41.063	ENSMICG00000008507	-	92	41.063	Microcebus_murinus
FBgn0038810	Srp72	94	41.506	ENSMOCG00000020309	Srp72	92	41.026	Microtus_ochrogaster
FBgn0038810	Srp72	94	41.026	ENSMMOG00000002627	srp72	92	40.770	Mola_mola
FBgn0038810	Srp72	93	41.195	ENSMODG00000020697	SRP72	92	41.308	Monodelphis_domestica
FBgn0038810	Srp72	96	40.062	ENSMALG00000003747	srp72	95	40.657	Monopterus_albus
FBgn0038810	Srp72	94	40.705	MGP_CAROLIEiJ_G0027323	Srp72	92	40.705	Mus_caroli
FBgn0038810	Srp72	94	40.705	ENSMUSG00000036323	Srp72	92	40.705	Mus_musculus
FBgn0038810	Srp72	94	41.506	MGP_PahariEiJ_G0017103	Srp72	92	41.026	Mus_pahari
FBgn0038810	Srp72	94	40.705	MGP_SPRETEiJ_G0028317	Srp72	92	40.705	Mus_spretus
FBgn0038810	Srp72	94	41.479	ENSMPUG00000004828	SRP72	92	40.865	Mustela_putorius_furo
FBgn0038810	Srp72	94	41.506	ENSMLUG00000007344	SRP72	91	41.413	Myotis_lucifugus
FBgn0038810	Srp72	97	40.615	ENSNGAG00000012595	Srp72	92	41.186	Nannospalax_galili
FBgn0038810	Srp72	98	38.906	ENSNBRG00000014492	srp72	95	39.104	Neolamprologus_brichardi
FBgn0038810	Srp72	94	39.263	ENSNLEG00000008806	-	91	38.782	Nomascus_leucogenys
FBgn0038810	Srp72	83	46.970	ENSMEUG00000005164	SRP72	84	46.154	Notamacropus_eugenii
FBgn0038810	Srp72	94	40.836	ENSOPRG00000012521	SRP72	92	40.705	Ochotona_princeps
FBgn0038810	Srp72	90	41.806	ENSODEG00000012214	SRP72	89	41.304	Octodon_degus
FBgn0038810	Srp72	96	40.804	ENSONIG00000001446	srp72	95	40.804	Oreochromis_niloticus
FBgn0038810	Srp72	94	36.533	ENSOANG00000008562	SRP72	91	37.002	Ornithorhynchus_anatinus
FBgn0038810	Srp72	94	41.186	ENSOCUG00000012226	SRP72	92	40.705	Oryctolagus_cuniculus
FBgn0038810	Srp72	98	39.389	ENSORLG00000020418	srp72	95	39.564	Oryzias_latipes
FBgn0038810	Srp72	98	39.389	ENSORLG00020009138	srp72	94	39.002	Oryzias_latipes_hni
FBgn0038810	Srp72	98	39.389	ENSORLG00015018251	srp72	95	39.408	Oryzias_latipes_hsok
FBgn0038810	Srp72	94	40.000	ENSOMEG00000022008	srp72	95	39.938	Oryzias_melastigma
FBgn0038810	Srp72	94	41.506	ENSOGAG00000003578	SRP72	95	40.930	Otolemur_garnettii
FBgn0038810	Srp72	94	41.827	ENSOARG00000004329	SRP72	92	41.346	Ovis_aries
FBgn0038810	Srp72	83	32.967	ENSPPAG00000032490	-	94	33.037	Pan_paniscus
FBgn0038810	Srp72	94	32.310	ENSPPAG00000011428	-	88	31.994	Pan_paniscus
FBgn0038810	Srp72	94	40.931	ENSPPAG00000042265	SRP72	92	40.931	Pan_paniscus
FBgn0038810	Srp72	94	41.214	ENSPPRG00000015991	SRP72	92	40.865	Panthera_pardus
FBgn0038810	Srp72	94	41.214	ENSPTIG00000018786	SRP72	92	40.865	Panthera_tigris_altaica
FBgn0038810	Srp72	94	40.931	ENSPTRG00000048466	-	92	40.931	Pan_troglodytes
FBgn0038810	Srp72	94	34.029	ENSPTRG00000048100	-	88	33.601	Pan_troglodytes
FBgn0038810	Srp72	82	32.961	ENSPTRG00000043609	-	94	32.918	Pan_troglodytes
FBgn0038810	Srp72	94	40.865	ENSPANG00000005495	SRP72	92	40.865	Papio_anubis
FBgn0038810	Srp72	93	34.416	ENSPANG00000030230	-	93	35.227	Papio_anubis
FBgn0038810	Srp72	90	40.902	ENSPSIG00000003003	SRP72	92	40.902	Pelodiscus_sinensis
FBgn0038810	Srp72	94	41.961	ENSPEMG00000012828	-	91	41.346	Peromyscus_maniculatus_bairdii
FBgn0038810	Srp72	94	41.760	ENSPCIG00000000732	SRP72	92	41.693	Phascolarctos_cinereus
FBgn0038810	Srp72	98	39.848	ENSPFOG00000003480	srp72	96	40.093	Poecilia_formosa
FBgn0038810	Srp72	98	39.909	ENSPLAG00000020122	srp72	96	40.155	Poecilia_latipinna
FBgn0038810	Srp72	98	39.848	ENSPMEG00000019988	srp72	96	40.093	Poecilia_mexicana
FBgn0038810	Srp72	98	39.909	ENSPREG00000006218	srp72	96	40.155	Poecilia_reticulata
FBgn0038810	Srp72	94	40.924	ENSPPYG00000014752	-	72	40.865	Pongo_abelii
FBgn0038810	Srp72	54	31.564	ENSPPYG00000009152	-	88	32.123	Pongo_abelii
FBgn0038810	Srp72	94	40.287	ENSPVAG00000005590	SRP72	92	40.064	Pteropus_vampyrus
FBgn0038810	Srp72	96	40.495	ENSPNYG00000001916	srp72	95	40.495	Pundamilia_nyererei
FBgn0038810	Srp72	96	40.625	ENSPNAG00000022424	srp72	95	40.845	Pygocentrus_nattereri
FBgn0038810	Srp72	94	39.936	ENSRNOG00000002100	LOC108348180	92	39.936	Rattus_norvegicus
FBgn0038810	Srp72	94	38.736	ENSRBIG00000042069	SRP72	92	39.060	Rhinopithecus_bieti
FBgn0038810	Srp72	96	34.451	ENSRBIG00000029328	-	97	34.843	Rhinopithecus_bieti
FBgn0038810	Srp72	94	40.865	ENSRROG00000035704	SRP72	92	40.865	Rhinopithecus_roxellana
FBgn0038810	Srp72	90	41.957	ENSSHAG00000000614	SRP72	88	41.667	Sarcophilus_harrisii
FBgn0038810	Srp72	96	41.589	ENSSFOG00015002026	srp72	95	41.342	Scleropages_formosus
FBgn0038810	Srp72	94	40.191	ENSSMAG00000007639	srp72	96	39.724	Scophthalmus_maximus
FBgn0038810	Srp72	94	41.401	ENSSDUG00000007345	srp72	94	40.895	Seriola_dumerili
FBgn0038810	Srp72	94	41.242	ENSSLDG00000021819	srp72	96	40.123	Seriola_lalandi_dorsalis
FBgn0038810	Srp72	54	36.667	ENSSARG00000005804	SRP72	52	36.667	Sorex_araneus
FBgn0038810	Srp72	96	40.867	ENSSPUG00000009740	SRP72	94	41.030	Sphenodon_punctatus
FBgn0038810	Srp72	94	40.640	ENSSPAG00000011565	srp72	95	40.278	Stegastes_partitus
FBgn0038810	Srp72	94	40.224	ENSSSCG00000008900	SRP72	91	39.744	Sus_scrofa
FBgn0038810	Srp72	93	42.122	ENSTGUG00000004767	SRP72	91	41.868	Taeniopygia_guttata
FBgn0038810	Srp72	96	40.062	ENSTRUG00000009831	srp72	90	47.426	Takifugu_rubripes
FBgn0038810	Srp72	96	40.343	ENSTNIG00000013073	srp72	95	40.343	Tetraodon_nigroviridis
FBgn0038810	Srp72	60	46.226	ENSTBEG00000007394	SRP72	59	46.226	Tupaia_belangeri
FBgn0038810	Srp72	90	40.932	ENSTTRG00000010945	SRP72	93	40.704	Tursiops_truncatus
FBgn0038810	Srp72	55	37.088	ENSUAMG00000001701	SRP72	88	36.975	Ursus_americanus
FBgn0038810	Srp72	94	41.374	ENSUMAG00000008151	SRP72	92	41.026	Ursus_maritimus
FBgn0038810	Srp72	94	40.127	ENSVPAG00000000458	SRP72	92	39.904	Vicugna_pacos
FBgn0038810	Srp72	94	41.083	ENSVVUG00000006020	SRP72	92	40.865	Vulpes_vulpes
FBgn0038810	Srp72	92	41.653	ENSXETG00000010205	srp72	94	41.419	Xenopus_tropicalis
FBgn0038810	Srp72	98	39.302	ENSXMAG00000018000	srp72	95	39.535	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	21873635.	IBA	Component
GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation	21873635.	IBA	Process
GO:0008312	7S RNA binding	-	IEA	Function
GO:0033227	dsRNA transport	16862146.	IMP	Process