EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038811 (Gene tree)
Gene ID: 42440
Gene Symbol: PUS1
Alias: -
Full Name: pseudouridylate synthase 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1648 bases
Position: chr3R:20591024-20592671
Accession: FBgn0038811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0083351	PseudoU_synth_1	PF01416.20	8.1e-15	1	1
FBpp0291529	PseudoU_synth_1	PF01416.20	1.1e-14	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0302323	-	1466	-	FBpp0291529	442 (aa)	-	C4XVI8
FBtr0083944	-	1462	-	FBpp0083351	410 (aa)	-	Q9VDK6

Gene Model

Click here to download FBgn0038811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038811	PUS1	78	48.447	ENSG00000177192	PUS1	87	46.364	Homo_sapiens
FBgn0038811	PUS1	83	45.797	ENSAPOG00000007254	pus1	90	43.081	Acanthochromis_polyacanthus
FBgn0038811	PUS1	90	44.000	ENSAMEG00000013715	PUS1	90	44.000	Ailuropoda_melanoleuca
FBgn0038811	PUS1	96	41.763	ENSACIG00000009169	pus1	97	41.763	Amphilophus_citrinellus
FBgn0038811	PUS1	83	46.821	ENSAOCG00000022207	pus1	81	46.821	Amphiprion_ocellaris
FBgn0038811	PUS1	83	46.821	ENSAPEG00000006039	pus1	87	46.821	Amphiprion_percula
FBgn0038811	PUS1	87	42.386	ENSATEG00000020688	pus1	87	45.954	Anabas_testudineus
FBgn0038811	PUS1	79	47.879	ENSACAG00000007367	PUS1	87	47.879	Anolis_carolinensis
FBgn0038811	PUS1	79	46.646	ENSANAG00000036192	PUS1	99	46.646	Aotus_nancymaae
FBgn0038811	PUS1	82	46.199	ENSACLG00000020868	pus1	86	46.064	Astatotilapia_calliptera
FBgn0038811	PUS1	84	46.418	ENSAMXG00000008710	pus1	78	46.418	Astyanax_mexicanus
FBgn0038811	PUS1	83	46.154	ENSBTAG00000012990	PUS1	87	46.154	Bos_taurus
FBgn0038811	PUS1	83	41.176	WBGene00004248	pus-1	84	41.176	Caenorhabditis_elegans
FBgn0038811	PUS1	62	50.000	ENSCJAG00000003720	PUS1	69	50.000	Callithrix_jacchus
FBgn0038811	PUS1	97	40.312	ENSCAFG00000006429	PUS1	97	40.312	Canis_familiaris
FBgn0038811	PUS1	91	41.487	ENSCAFG00020010737	PUS1	93	41.487	Canis_lupus_dingo
FBgn0038811	PUS1	90	44.474	ENSCHIG00000000487	PUS1	90	44.474	Capra_hircus
FBgn0038811	PUS1	77	48.125	ENSTSYG00000032605	PUS1	93	46.364	Carlito_syrichta
FBgn0038811	PUS1	72	49.338	ENSCAPG00000006421	PUS1	100	47.401	Cavia_aperea
FBgn0038811	PUS1	78	48.457	ENSCPOG00000001027	PUS1	87	41.618	Cavia_porcellus
FBgn0038811	PUS1	78	47.840	ENSCCAG00000015879	PUS1	91	46.269	Cebus_capucinus
FBgn0038811	PUS1	87	43.716	ENSCATG00000032870	PUS1	97	43.716	Cercocebus_atys
FBgn0038811	PUS1	78	48.457	ENSCLAG00000011689	PUS1	88	41.408	Chinchilla_lanigera
FBgn0038811	PUS1	84	45.869	ENSCSAG00000001879	PUS1	81	45.869	Chlorocebus_sabaeus
FBgn0038811	PUS1	75	47.588	ENSCPBG00000024715	PUS1	93	46.386	Chrysemys_picta_bellii
FBgn0038811	PUS1	90	39.410	ENSCING00000009426	-	96	39.410	Ciona_intestinalis
FBgn0038811	PUS1	78	43.827	ENSCSAVG00000003751	-	66	43.827	Ciona_savignyi
FBgn0038811	PUS1	87	39.295	ENSCANG00000035561	PUS1	97	39.295	Colobus_angolensis_palliatus
FBgn0038811	PUS1	83	45.869	ENSCGRG00001019592	Pus1	87	41.092	Cricetulus_griseus_chok1gshd
FBgn0038811	PUS1	83	45.869	ENSCGRG00000004048	Pus1	89	45.869	Cricetulus_griseus_crigri
FBgn0038811	PUS1	93	42.308	ENSCSEG00000003629	pus1	93	42.308	Cynoglossus_semilaevis
FBgn0038811	PUS1	83	46.552	ENSCVAG00000001265	pus1	82	46.552	Cyprinodon_variegatus
FBgn0038811	PUS1	83	45.797	ENSDARG00000045562	pus1	94	48.864	Danio_rerio
FBgn0038811	PUS1	79	48.328	ENSDNOG00000045576	PUS1	98	47.840	Dasypus_novemcinctus
FBgn0038811	PUS1	79	46.988	ENSDORG00000011455	Pus1	99	46.988	Dipodomys_ordii
FBgn0038811	PUS1	83	44.638	ENSETEG00000019160	PUS1	87	43.855	Echinops_telfairi
FBgn0038811	PUS1	83	37.741	ENSEBUG00000000368	-	68	37.398	Eptatretus_burgeri
FBgn0038811	PUS1	84	46.154	ENSEASG00005016535	PUS1	80	46.552	Equus_asinus_asinus
FBgn0038811	PUS1	83	46.686	ENSECAG00000006965	PUS1	86	46.686	Equus_caballus
FBgn0038811	PUS1	83	47.674	ENSELUG00000010424	pus1	86	47.399	Esox_lucius
FBgn0038811	PUS1	80	46.224	ENSFCAG00000010780	PUS1	77	46.224	Felis_catus
FBgn0038811	PUS1	88	44.086	ENSFALG00000008273	PUS1	85	44.086	Ficedula_albicollis
FBgn0038811	PUS1	84	46.418	ENSFDAG00000012518	PUS1	84	46.418	Fukomys_damarensis
FBgn0038811	PUS1	67	30.218	ENSFHEG00000010984	pus3	57	30.218	Fundulus_heteroclitus
FBgn0038811	PUS1	83	45.797	ENSFHEG00000010504	pus1	82	45.797	Fundulus_heteroclitus
FBgn0038811	PUS1	79	47.748	ENSGMOG00000008143	pus1	84	47.748	Gadus_morhua
FBgn0038811	PUS1	88	45.924	ENSGALG00000002354	PUS1	87	45.924	Gallus_gallus
FBgn0038811	PUS1	84	46.154	ENSGAFG00000006578	pus1	82	46.154	Gambusia_affinis
FBgn0038811	PUS1	84	46.286	ENSGACG00000017566	pus1	93	41.834	Gasterosteus_aculeatus
FBgn0038811	PUS1	82	45.161	ENSGAGG00000016730	-	97	45.161	Gopherus_agassizii
FBgn0038811	PUS1	79	47.546	ENSGGOG00000009178	PUS1	87	46.061	Gorilla_gorilla
FBgn0038811	PUS1	82	46.199	ENSHBUG00000001316	pus1	86	46.064	Haplochromis_burtoni
FBgn0038811	PUS1	91	44.180	ENSHGLG00000016086	PUS1	96	44.180	Heterocephalus_glaber_female
FBgn0038811	PUS1	91	43.915	ENSHGLG00100019362	PUS1	96	43.915	Heterocephalus_glaber_male
FBgn0038811	PUS1	83	45.272	ENSHCOG00000014288	pus1	80	45.272	Hippocampus_comes
FBgn0038811	PUS1	84	46.705	ENSIPUG00000010387	pus1	88	46.705	Ictalurus_punctatus
FBgn0038811	PUS1	55	30.000	ENSIPUG00000000105	pus3	53	30.000	Ictalurus_punctatus
FBgn0038811	PUS1	78	47.692	ENSSTOG00000011245	PUS1	82	46.176	Ictidomys_tridecemlineatus
FBgn0038811	PUS1	84	45.559	ENSJJAG00000000088	Pus1	87	40.751	Jaculus_jaculus
FBgn0038811	PUS1	89	43.968	ENSKMAG00000012702	pus1	87	43.968	Kryptolebias_marmoratus
FBgn0038811	PUS1	90	43.386	ENSLBEG00000002845	pus1	93	43.386	Labrus_bergylta
FBgn0038811	PUS1	88	44.118	ENSLACG00000018598	PUS1	93	42.967	Latimeria_chalumnae
FBgn0038811	PUS1	80	44.848	ENSLACG00000016044	-	99	44.848	Latimeria_chalumnae
FBgn0038811	PUS1	84	47.025	ENSLOCG00000006127	pus1	88	47.025	Lepisosteus_oculatus
FBgn0038811	PUS1	78	47.222	ENSLAFG00000028731	PUS1	94	44.759	Loxodonta_africana
FBgn0038811	PUS1	87	43.443	ENSMFAG00000041194	PUS1	97	43.443	Macaca_fascicularis
FBgn0038811	PUS1	81	45.266	ENSMMUG00000031463	PUS1	94	45.266	Macaca_mulatta
FBgn0038811	PUS1	87	43.443	ENSMNEG00000002814	PUS1	97	43.443	Macaca_nemestrina
FBgn0038811	PUS1	87	43.443	ENSMLEG00000043560	PUS1	100	46.364	Mandrillus_leucophaeus
FBgn0038811	PUS1	83	46.243	ENSMAMG00000007371	pus1	81	46.243	Mastacembelus_armatus
FBgn0038811	PUS1	82	46.199	ENSMZEG00005017746	pus1	80	46.199	Maylandia_zebra
FBgn0038811	PUS1	78	46.933	ENSMGAG00000001958	PUS1	98	47.077	Meleagris_gallopavo
FBgn0038811	PUS1	83	45.869	ENSMAUG00000001482	Pus1	87	41.092	Mesocricetus_auratus
FBgn0038811	PUS1	78	48.457	ENSMICG00000030980	PUS1	80	48.765	Microcebus_murinus
FBgn0038811	PUS1	84	45.506	ENSMOCG00000022311	Pus1	88	40.793	Microtus_ochrogaster
FBgn0038811	PUS1	87	46.505	ENSMMOG00000021022	pus1	95	46.505	Mola_mola
FBgn0038811	PUS1	54	30.116	ENSMMOG00000013909	pus3	52	30.116	Mola_mola
FBgn0038811	PUS1	99	41.667	ENSMODG00000015551	PUS1	92	41.667	Monodelphis_domestica
FBgn0038811	PUS1	84	45.845	ENSMALG00000013202	pus1	82	46.439	Monopterus_albus
FBgn0038811	PUS1	84	45.634	MGP_CAROLIEiJ_G0027551	Pus1	90	45.634	Mus_caroli
FBgn0038811	PUS1	84	45.634	ENSMUSG00000029507	Pus1	90	45.634	Mus_musculus
FBgn0038811	PUS1	91	44.648	MGP_PahariEiJ_G0024133	Pus1	95	44.648	Mus_pahari
FBgn0038811	PUS1	84	45.634	MGP_SPRETEiJ_G0028549	Pus1	90	45.634	Mus_spretus
FBgn0038811	PUS1	88	45.109	ENSMPUG00000002314	PUS1	92	45.109	Mustela_putorius_furo
FBgn0038811	PUS1	83	44.699	ENSMLUG00000015790	PUS1	95	44.699	Myotis_lucifugus
FBgn0038811	PUS1	84	45.915	ENSNGAG00000012976	Pus1	88	41.193	Nannospalax_galili
FBgn0038811	PUS1	81	46.450	ENSNBRG00000020502	pus1	87	47.077	Neolamprologus_brichardi
FBgn0038811	PUS1	84	45.376	ENSNLEG00000008505	PUS1	99	46.708	Nomascus_leucogenys
FBgn0038811	PUS1	78	42.236	ENSMEUG00000002825	PUS1	87	42.236	Notamacropus_eugenii
FBgn0038811	PUS1	79	42.945	ENSOPRG00000002701	-	85	42.945	Ochotona_princeps
FBgn0038811	PUS1	82	46.647	ENSODEG00000008248	PUS1	84	47.988	Octodon_degus
FBgn0038811	PUS1	85	43.188	ENSONIG00000003803	pus1	96	43.188	Oreochromis_niloticus
FBgn0038811	PUS1	78	47.840	ENSOANG00000010619	PUS1	73	47.840	Ornithorhynchus_anatinus
FBgn0038811	PUS1	79	47.853	ENSOCUG00000007310	PUS1	71	47.561	Oryctolagus_cuniculus
FBgn0038811	PUS1	77	48.287	ENSORLG00000010787	pus1	76	48.287	Oryzias_latipes
FBgn0038811	PUS1	77	48.910	ENSORLG00020011483	pus1	76	48.910	Oryzias_latipes_hni
FBgn0038811	PUS1	77	48.910	ENSORLG00015023012	pus1	82	48.910	Oryzias_latipes_hsok
FBgn0038811	PUS1	77	48.598	ENSOMEG00000022655	pus1	75	48.598	Oryzias_melastigma
FBgn0038811	PUS1	89	45.676	ENSOGAG00000008720	PUS1	96	45.676	Otolemur_garnettii
FBgn0038811	PUS1	83	45.584	ENSOARG00000013316	PUS1	80	45.584	Ovis_aries
FBgn0038811	PUS1	79	48.012	ENSPPAG00000040971	PUS1	87	46.667	Pan_paniscus
FBgn0038811	PUS1	80	46.364	ENSPPRG00000015456	PUS1	83	46.364	Panthera_pardus
FBgn0038811	PUS1	78	46.914	ENSPTIG00000004201	PUS1	85	46.364	Panthera_tigris_altaica
FBgn0038811	PUS1	84	46.154	ENSPTRG00000005643	PUS1	87	46.970	Pan_troglodytes
FBgn0038811	PUS1	87	43.716	ENSPANG00000000376	PUS1	97	43.716	Papio_anubis
FBgn0038811	PUS1	92	41.995	ENSPKIG00000019369	pus1	87	40.594	Paramormyrops_kingsleyae
FBgn0038811	PUS1	90	42.969	ENSPSIG00000016432	PUS1	92	41.667	Pelodiscus_sinensis
FBgn0038811	PUS1	81	47.478	ENSPMGG00000004522	pus1	89	47.170	Periophthalmus_magnuspinnatus
FBgn0038811	PUS1	84	45.634	ENSPEMG00000013448	Pus1	88	40.909	Peromyscus_maniculatus_bairdii
FBgn0038811	PUS1	80	43.072	ENSPMAG00000004636	pus1	99	43.072	Petromyzon_marinus
FBgn0038811	PUS1	64	47.909	ENSPCIG00000022609	-	67	46.809	Phascolarctos_cinereus
FBgn0038811	PUS1	84	46.857	ENSPFOG00000019669	pus1	82	46.857	Poecilia_formosa
FBgn0038811	PUS1	84	47.143	ENSPLAG00000007185	pus1	82	47.143	Poecilia_latipinna
FBgn0038811	PUS1	84	47.143	ENSPLAG00000002692	-	82	47.143	Poecilia_latipinna
FBgn0038811	PUS1	84	46.857	ENSPMEG00000006038	pus1	85	46.857	Poecilia_mexicana
FBgn0038811	PUS1	84	46.857	ENSPMEG00000011115	PUS1	82	46.857	Poecilia_mexicana
FBgn0038811	PUS1	79	47.892	ENSPREG00000007231	pus1	92	47.892	Poecilia_reticulata
FBgn0038811	PUS1	84	45.714	ENSPPYG00000005132	PUS1	82	45.714	Pongo_abelii
FBgn0038811	PUS1	62	48.837	ENSPCAG00000009110	-	62	48.837	Procavia_capensis
FBgn0038811	PUS1	84	42.120	ENSPCOG00000015595	PUS1	86	42.286	Propithecus_coquereli
FBgn0038811	PUS1	82	45.906	ENSPNYG00000013571	pus1	80	45.906	Pundamilia_nyererei
FBgn0038811	PUS1	78	49.538	ENSPNAG00000003938	pus1	76	49.538	Pygocentrus_nattereri
FBgn0038811	PUS1	84	45.634	ENSRNOG00000037500	Pus1	83	45.634	Rattus_norvegicus
FBgn0038811	PUS1	87	42.582	ENSRBIG00000043177	PUS1	98	42.582	Rhinopithecus_bieti
FBgn0038811	PUS1	84	45.845	ENSRROG00000039744	PUS1	99	44.444	Rhinopithecus_roxellana
FBgn0038811	PUS1	63	31.348	YGL063W	-	85	31.348	Saccharomyces_cerevisiae
FBgn0038811	PUS1	76	31.525	YPL212C	-	71	31.783	Saccharomyces_cerevisiae
FBgn0038811	PUS1	83	45.739	ENSSBOG00000023593	PUS1	92	46.440	Saimiri_boliviensis_boliviensis
FBgn0038811	PUS1	84	44.350	ENSSHAG00000013193	PUS1	80	45.646	Sarcophilus_harrisii
FBgn0038811	PUS1	95	40.835	ENSSFOG00015003463	pus1	99	40.980	Scleropages_formosus
FBgn0038811	PUS1	83	47.278	ENSSMAG00000019075	pus1	81	47.278	Scophthalmus_maximus
FBgn0038811	PUS1	83	45.402	ENSSDUG00000007102	pus1	80	45.402	Seriola_dumerili
FBgn0038811	PUS1	83	45.690	ENSSLDG00000022850	pus1	80	45.690	Seriola_lalandi_dorsalis
FBgn0038811	PUS1	72	42.857	ENSSARG00000008367	PUS1	97	42.574	Sorex_araneus
FBgn0038811	PUS1	91	44.757	ENSSPUG00000010009	PUS1	97	44.757	Sphenodon_punctatus
FBgn0038811	PUS1	83	45.954	ENSSPAG00000006272	pus1	87	45.954	Stegastes_partitus
FBgn0038811	PUS1	99	40.535	ENSSSCG00000009741	PUS1	97	40.535	Sus_scrofa
FBgn0038811	PUS1	79	46.201	ENSTGUG00000008068	PUS1	99	46.201	Taeniopygia_guttata
FBgn0038811	PUS1	84	45.609	ENSTRUG00000002198	pus1	90	45.609	Takifugu_rubripes
FBgn0038811	PUS1	84	46.761	ENSTNIG00000003942	pus1	90	46.761	Tetraodon_nigroviridis
FBgn0038811	PUS1	84	46.000	ENSTTRG00000000632	PUS1	82	46.000	Tursiops_truncatus
FBgn0038811	PUS1	88	44.658	ENSUAMG00000017197	PUS1	92	44.658	Ursus_americanus
FBgn0038811	PUS1	87	45.304	ENSUMAG00000002831	PUS1	100	46.866	Ursus_maritimus
FBgn0038811	PUS1	85	45.763	ENSVVUG00000004199	PUS1	80	45.404	Vulpes_vulpes
FBgn0038811	PUS1	78	47.077	ENSXETG00000002030	pus1	80	47.077	Xenopus_tropicalis
FBgn0038811	PUS1	78	43.210	ENSXETG00000033640	-	100	43.210	Xenopus_tropicalis
FBgn0038811	PUS1	84	46.439	ENSXCOG00000004722	pus1	89	46.439	Xiphophorus_couchianus
FBgn0038811	PUS1	84	46.724	ENSXMAG00000000988	pus1	82	46.724	Xiphophorus_maculatus
FBgn0038811	PUS1	53	30.233	ENSXMAG00000025146	pus3	70	30.233	Xiphophorus_maculatus
FBgn0038811	PUS1	53	30.233	ENSXMAG00000028945	pus3	76	30.233	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0009982	pseudouridine synthase activity	21873635.	IBA	Function
GO:0031119	tRNA pseudouridine synthesis	21873635.	IBA	Process
GO:1990481	mRNA pseudouridine synthesis	21873635.	IBA	Process