EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038887 (Gene tree)
Gene ID: 42539
Gene Symbol: CG7907
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2956 bases
Position: chr3R:21403735-21406690
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0112173	MIF4G_like	PF09088.11	1e-30	1	1
FBpp0112174	MIF4G_like	PF09088.11	1e-30	1	1
FBpp0112173	MIF4G_like_2	PF09090.11	4.9e-37	1	1
FBpp0112174	MIF4G_like_2	PF09090.11	4.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0113262	-	2616	-	FBpp0112174	753 (aa)	-	Q4V551
FBtr0113261	-	2733	-	FBpp0112173	753 (aa)	-	Q4V551

Gene Model

Click here to download FBgn0038887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0038887	CG7907	99	32.479	FBgn0022942	Cbp80	99	32.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038887	CG7907	87	33.871	ENSG00000136937	NCBP1	84	33.871	Homo_sapiens
FBgn0038887	CG7907	87	32.891	ENSAPOG00000008002	NCBP1	82	32.891	Acanthochromis_polyacanthus
FBgn0038887	CG7907	87	33.918	ENSAMEG00000004763	NCBP1	84	33.918	Ailuropoda_melanoleuca
FBgn0038887	CG7907	87	33.137	ENSACIG00000000274	NCBP1	83	33.137	Amphilophus_citrinellus
FBgn0038887	CG7907	87	33.284	ENSAOCG00000021148	NCBP1	83	33.284	Amphiprion_ocellaris
FBgn0038887	CG7907	87	33.284	ENSAPEG00000001701	NCBP1	83	33.284	Amphiprion_percula
FBgn0038887	CG7907	87	34.315	ENSATEG00000006929	NCBP1	83	34.315	Anabas_testudineus
FBgn0038887	CG7907	82	32.972	ENSAPLG00000016318	NCBP1	83	33.076	Anas_platyrhynchos
FBgn0038887	CG7907	87	33.382	ENSACAG00000004409	NCBP1	72	33.382	Anolis_carolinensis
FBgn0038887	CG7907	87	33.819	ENSANAG00000025744	NCBP1	84	33.819	Aotus_nancymaae
FBgn0038887	CG7907	87	33.137	ENSACLG00000014812	NCBP1	83	33.137	Astatotilapia_calliptera
FBgn0038887	CG7907	87	33.333	ENSAMXG00000016364	NCBP1	82	33.284	Astyanax_mexicanus
FBgn0038887	CG7907	87	34.018	ENSBTAG00000009732	NCBP1	84	34.018	Bos_taurus
FBgn0038887	CG7907	87	33.578	ENSCJAG00000010840	NCBP1	98	31.529	Callithrix_jacchus
FBgn0038887	CG7907	87	33.871	ENSCAFG00000002445	NCBP1	84	33.871	Canis_familiaris
FBgn0038887	CG7907	85	33.886	ENSCAFG00020017997	NCBP1	94	31.941	Canis_lupus_dingo
FBgn0038887	CG7907	87	34.018	ENSCHIG00000020139	NCBP1	84	34.018	Capra_hircus
FBgn0038887	CG7907	53	31.773	ENSTSYG00000011914	NCBP1	93	31.773	Carlito_syrichta
FBgn0038887	CG7907	77	32.226	ENSCAPG00000014252	NCBP1	83	32.226	Cavia_aperea
FBgn0038887	CG7907	81	34.537	ENSCPOG00000012573	NCBP1	80	34.537	Cavia_porcellus
FBgn0038887	CG7907	87	33.871	ENSCCAG00000032297	NCBP1	84	33.871	Cebus_capucinus
FBgn0038887	CG7907	87	33.871	ENSCATG00000010052	NCBP1	84	33.871	Cercocebus_atys
FBgn0038887	CG7907	87	33.871	ENSCLAG00000014339	NCBP1	84	33.871	Chinchilla_lanigera
FBgn0038887	CG7907	87	33.871	ENSCSAG00000010929	NCBP1	84	33.871	Chlorocebus_sabaeus
FBgn0038887	CG7907	79	30.832	ENSCHOG00000010332	NCBP1	75	30.832	Choloepus_hoffmanni
FBgn0038887	CG7907	87	32.635	ENSCPBG00000024344	NCBP1	82	32.635	Chrysemys_picta_bellii
FBgn0038887	CG7907	86	31.610	ENSCING00000008990	-	82	32.053	Ciona_intestinalis
FBgn0038887	CG7907	86	30.396	ENSCSAVG00000005300	-	81	30.396	Ciona_savignyi
FBgn0038887	CG7907	87	33.871	ENSCANG00000036913	NCBP1	84	33.871	Colobus_angolensis_palliatus
FBgn0038887	CG7907	87	33.235	ENSCGRG00001015771	Ncbp1	83	33.235	Cricetulus_griseus_chok1gshd
FBgn0038887	CG7907	85	33.584	ENSCGRG00000010311	Ncbp1	82	33.584	Cricetulus_griseus_crigri
FBgn0038887	CG7907	87	34.315	ENSCSEG00000012377	NCBP1	83	34.315	Cynoglossus_semilaevis
FBgn0038887	CG7907	87	33.432	ENSCVAG00000008795	NCBP1	82	33.432	Cyprinodon_variegatus
FBgn0038887	CG7907	87	34.018	ENSDNOG00000006885	NCBP1	84	34.018	Dasypus_novemcinctus
FBgn0038887	CG7907	87	33.333	ENSDORG00000013652	Ncbp1	83	33.333	Dipodomys_ordii
FBgn0038887	CG7907	75	38.166	ENSETEG00000009705	NCBP1	72	38.166	Echinops_telfairi
FBgn0038887	CG7907	99	31.457	ENSEBUG00000008386	NCBP1	99	31.457	Eptatretus_burgeri
FBgn0038887	CG7907	87	33.871	ENSEASG00005022795	NCBP1	84	33.871	Equus_asinus_asinus
FBgn0038887	CG7907	87	33.871	ENSECAG00000013847	NCBP1	84	33.871	Equus_caballus
FBgn0038887	CG7907	87	32.253	ENSEEUG00000015973	NCBP1	87	32.253	Erinaceus_europaeus
FBgn0038887	CG7907	87	34.315	ENSELUG00000022519	NCBP1	82	34.315	Esox_lucius
FBgn0038887	CG7907	87	33.871	ENSFCAG00000001206	NCBP1	84	33.871	Felis_catus
FBgn0038887	CG7907	85	33.283	ENSFALG00000001193	NCBP1	82	33.283	Ficedula_albicollis
FBgn0038887	CG7907	87	33.871	ENSFDAG00000010864	NCBP1	84	33.871	Fukomys_damarensis
FBgn0038887	CG7907	87	33.284	ENSFHEG00000000655	NCBP1	82	33.284	Fundulus_heteroclitus
FBgn0038887	CG7907	88	33.869	ENSGMOG00000008653	NCBP1	82	33.869	Gadus_morhua
FBgn0038887	CG7907	86	32.885	ENSGALG00000002087	NCBP1	82	33.432	Gallus_gallus
FBgn0038887	CG7907	87	33.579	ENSGAFG00000017787	NCBP1	84	33.579	Gambusia_affinis
FBgn0038887	CG7907	87	33.529	ENSGACG00000016772	NCBP1	82	33.529	Gasterosteus_aculeatus
FBgn0038887	CG7907	86	32.735	ENSGAGG00000019483	NCBP1	82	32.836	Gopherus_agassizii
FBgn0038887	CG7907	87	33.871	ENSGGOG00000001376	NCBP1	84	33.871	Gorilla_gorilla
FBgn0038887	CG7907	87	33.137	ENSHBUG00000020843	NCBP1	83	33.137	Haplochromis_burtoni
FBgn0038887	CG7907	87	30.307	ENSHGLG00000018112	-	85	30.307	Heterocephalus_glaber_female
FBgn0038887	CG7907	87	33.724	ENSHGLG00000001882	NCBP1	84	33.724	Heterocephalus_glaber_female
FBgn0038887	CG7907	87	30.161	ENSHGLG00100017373	-	85	30.161	Heterocephalus_glaber_male
FBgn0038887	CG7907	87	33.724	ENSHGLG00100013014	NCBP1	84	33.724	Heterocephalus_glaber_male
FBgn0038887	CG7907	60	36.211	ENSHCOG00000000204	NCBP1	67	36.211	Hippocampus_comes
FBgn0038887	CG7907	87	34.218	ENSIPUG00000007275	ncbp1	82	34.462	Ictalurus_punctatus
FBgn0038887	CG7907	87	33.578	ENSSTOG00000002695	NCBP1	84	33.578	Ictidomys_tridecemlineatus
FBgn0038887	CG7907	87	33.726	ENSKMAG00000003594	NCBP1	99	33.855	Kryptolebias_marmoratus
FBgn0038887	CG7907	87	32.948	ENSLBEG00000011661	NCBP1	83	32.948	Labrus_bergylta
FBgn0038887	CG7907	79	33.063	ENSLACG00000013955	NCBP1	82	31.664	Latimeria_chalumnae
FBgn0038887	CG7907	87	30.447	ENSLOCG00000009579	NCBP1	83	30.447	Lepisosteus_oculatus
FBgn0038887	CG7907	87	33.724	ENSLAFG00000005999	NCBP1	84	33.724	Loxodonta_africana
FBgn0038887	CG7907	87	33.871	ENSMFAG00000030994	NCBP1	84	33.871	Macaca_fascicularis
FBgn0038887	CG7907	85	33.886	ENSMMUG00000012281	NCBP1	81	35.413	Macaca_mulatta
FBgn0038887	CG7907	87	33.871	ENSMNEG00000042790	NCBP1	84	33.871	Macaca_nemestrina
FBgn0038887	CG7907	87	33.871	ENSMLEG00000030374	NCBP1	84	33.871	Mandrillus_leucophaeus
FBgn0038887	CG7907	87	33.726	ENSMAMG00000014806	NCBP1	83	33.726	Mastacembelus_armatus
FBgn0038887	CG7907	87	33.137	ENSMZEG00005003469	NCBP1	83	33.137	Maylandia_zebra
FBgn0038887	CG7907	83	32.868	ENSMZEG00005009290	-	82	32.868	Maylandia_zebra
FBgn0038887	CG7907	87	32.305	ENSMAUG00000020583	Ncbp1	83	32.305	Mesocricetus_auratus
FBgn0038887	CG7907	87	33.724	ENSMICG00000012682	NCBP1	84	33.724	Microcebus_murinus
FBgn0038887	CG7907	87	33.088	ENSMOCG00000015818	Ncbp1	83	33.088	Microtus_ochrogaster
FBgn0038887	CG7907	77	34.053	ENSMMOG00000002610	NCBP1	81	34.053	Mola_mola
FBgn0038887	CG7907	87	33.480	ENSMODG00000003202	NCBP1	83	33.480	Monodelphis_domestica
FBgn0038887	CG7907	87	33.726	ENSMALG00000003547	NCBP1	83	33.726	Monopterus_albus
FBgn0038887	CG7907	87	32.990	MGP_CAROLIEiJ_G0025982	Ncbp1	83	32.990	Mus_caroli
FBgn0038887	CG7907	87	32.990	ENSMUSG00000028330	Ncbp1	83	32.990	Mus_musculus
FBgn0038887	CG7907	87	33.137	MGP_PahariEiJ_G0028318	Ncbp1	83	33.137	Mus_pahari
FBgn0038887	CG7907	87	32.990	MGP_SPRETEiJ_G0026945	Ncbp1	83	32.990	Mus_spretus
FBgn0038887	CG7907	87	33.871	ENSMPUG00000006399	NCBP1	84	33.871	Mustela_putorius_furo
FBgn0038887	CG7907	85	33.636	ENSMLUG00000015201	NCBP1	82	33.636	Myotis_lucifugus
FBgn0038887	CG7907	87	33.529	ENSNGAG00000014101	Ncbp1	83	33.529	Nannospalax_galili
FBgn0038887	CG7907	65	36.879	ENSNBRG00000014674	NCBP1	79	36.879	Neolamprologus_brichardi
FBgn0038887	CG7907	87	33.871	ENSNLEG00000016909	NCBP1	84	33.871	Nomascus_leucogenys
FBgn0038887	CG7907	73	33.333	ENSMEUG00000010672	NCBP1	69	33.333	Notamacropus_eugenii
FBgn0038887	CG7907	65	33.333	ENSOPRG00000002144	-	66	33.333	Ochotona_princeps
FBgn0038887	CG7907	87	33.871	ENSODEG00000003232	NCBP1	84	33.871	Octodon_degus
FBgn0038887	CG7907	87	33.284	ENSONIG00000001502	NCBP1	83	33.284	Oreochromis_niloticus
FBgn0038887	CG7907	83	33.540	ENSOANG00000001918	NCBP1	99	33.540	Ornithorhynchus_anatinus
FBgn0038887	CG7907	87	33.675	ENSOCUG00000013853	NCBP1	83	33.675	Oryctolagus_cuniculus
FBgn0038887	CG7907	87	34.168	ENSORLG00000011008	NCBP1	82	34.168	Oryzias_latipes
FBgn0038887	CG7907	87	34.021	ENSORLG00020017455	NCBP1	82	34.021	Oryzias_latipes_hni
FBgn0038887	CG7907	87	34.021	ENSORLG00015012127	NCBP1	82	34.021	Oryzias_latipes_hsok
FBgn0038887	CG7907	87	33.726	ENSOMEG00000020698	NCBP1	82	33.726	Oryzias_melastigma
FBgn0038887	CG7907	87	33.918	ENSOGAG00000013888	NCBP1	84	33.918	Otolemur_garnettii
FBgn0038887	CG7907	87	34.018	ENSOARG00000011233	NCBP1	84	34.018	Ovis_aries
FBgn0038887	CG7907	87	33.871	ENSPPAG00000026462	NCBP1	84	33.871	Pan_paniscus
FBgn0038887	CG7907	87	33.871	ENSPPRG00000022574	NCBP1	84	33.871	Panthera_pardus
FBgn0038887	CG7907	87	33.871	ENSPTIG00000018507	NCBP1	84	33.871	Panthera_tigris_altaica
FBgn0038887	CG7907	87	33.871	ENSPTRG00000021167	NCBP1	84	33.871	Pan_troglodytes
FBgn0038887	CG7907	87	33.871	ENSPANG00000025591	NCBP1	84	33.871	Papio_anubis
FBgn0038887	CG7907	87	33.826	ENSPKIG00000015861	NCBP1	82	34.071	Paramormyrops_kingsleyae
FBgn0038887	CG7907	87	32.362	ENSPMGG00000020476	NCBP1	83	32.362	Periophthalmus_magnuspinnatus
FBgn0038887	CG7907	87	33.284	ENSPEMG00000020105	Ncbp1	83	33.284	Peromyscus_maniculatus_bairdii
FBgn0038887	CG7907	88	31.524	ENSPMAG00000005533	NCBP1	86	31.524	Petromyzon_marinus
FBgn0038887	CG7907	87	33.480	ENSPCIG00000015800	NCBP1	80	39.516	Phascolarctos_cinereus
FBgn0038887	CG7907	87	33.284	ENSPFOG00000004158	NCBP1	82	33.284	Poecilia_formosa
FBgn0038887	CG7907	87	33.284	ENSPLAG00000020002	NCBP1	82	33.284	Poecilia_latipinna
FBgn0038887	CG7907	87	33.284	ENSPMEG00000019821	NCBP1	82	33.284	Poecilia_mexicana
FBgn0038887	CG7907	87	32.990	ENSPREG00000006035	NCBP1	82	32.990	Poecilia_reticulata
FBgn0038887	CG7907	87	33.871	ENSPPYG00000019426	NCBP1	84	33.871	Pongo_abelii
FBgn0038887	CG7907	70	30.859	ENSPCAG00000009943	NCBP1	67	31.128	Procavia_capensis
FBgn0038887	CG7907	66	38.710	ENSPCOG00000020024	NCBP1	76	38.710	Propithecus_coquereli
FBgn0038887	CG7907	87	34.018	ENSPVAG00000005924	NCBP1	84	34.018	Pteropus_vampyrus
FBgn0038887	CG7907	77	34.615	ENSPNYG00000002140	NCBP1	80	34.615	Pundamilia_nyererei
FBgn0038887	CG7907	87	33.235	ENSPNAG00000027753	NCBP1	82	33.235	Pygocentrus_nattereri
FBgn0038887	CG7907	87	33.137	ENSRNOG00000023605	Ncbp1	83	33.137	Rattus_norvegicus
FBgn0038887	CG7907	87	33.871	ENSRBIG00000043175	NCBP1	84	33.871	Rhinopithecus_bieti
FBgn0038887	CG7907	87	33.871	ENSRROG00000029767	NCBP1	84	33.871	Rhinopithecus_roxellana
FBgn0038887	CG7907	87	33.871	ENSSBOG00000019378	NCBP1	94	31.863	Saimiri_boliviensis_boliviensis
FBgn0038887	CG7907	86	34.535	ENSSFOG00015001872	NCBP1	82	34.644	Scleropages_formosus
FBgn0038887	CG7907	87	32.842	ENSSMAG00000007463	NCBP1	83	32.842	Scophthalmus_maximus
FBgn0038887	CG7907	87	34.168	ENSSDUG00000007019	NCBP1	90	34.168	Seriola_dumerili
FBgn0038887	CG7907	87	34.021	ENSSLDG00000021924	NCBP1	83	34.021	Seriola_lalandi_dorsalis
FBgn0038887	CG7907	87	30.588	ENSSPUG00000008609	NCBP1	83	30.690	Sphenodon_punctatus
FBgn0038887	CG7907	87	33.726	ENSSPAG00000012550	NCBP1	83	33.726	Stegastes_partitus
FBgn0038887	CG7907	87	34.018	ENSSSCG00000005366	NCBP1	84	34.018	Sus_scrofa
FBgn0038887	CG7907	87	31.905	ENSTGUG00000001472	NCBP1	82	31.905	Taeniopygia_guttata
FBgn0038887	CG7907	87	32.796	ENSTRUG00000005287	NCBP1	83	32.796	Takifugu_rubripes
FBgn0038887	CG7907	87	33.724	ENSTBEG00000004035	NCBP1	84	33.724	Tupaia_belangeri
FBgn0038887	CG7907	74	38.919	ENSTTRG00000000507	NCBP1	71	38.919	Tursiops_truncatus
FBgn0038887	CG7907	87	34.018	ENSUAMG00000005471	NCBP1	84	34.018	Ursus_americanus
FBgn0038887	CG7907	84	32.827	ENSUMAG00000011865	NCBP1	81	35.192	Ursus_maritimus
FBgn0038887	CG7907	77	35.382	ENSVPAG00000010537	NCBP1	74	35.382	Vicugna_pacos
FBgn0038887	CG7907	87	33.871	ENSVVUG00000019725	NCBP1	84	33.871	Vulpes_vulpes
FBgn0038887	CG7907	87	33.188	ENSXETG00000010179	ncbp1	83	33.188	Xenopus_tropicalis
FBgn0038887	CG7907	87	33.579	ENSXMAG00000018253	NCBP1	82	33.579	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	21873635.	IBA	Process
GO:0000339	RNA cap binding	21873635.	IBA	Function
GO:0000398	mRNA splicing, via spliceosome	10908584.	ISS	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005845	mRNA cap binding complex	21873635.	IBA	Component
GO:0005846	nuclear cap binding complex	21873635.	IBA	Component
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0031053	primary miRNA processing	21873635.	IBA	Process
GO:0045292	mRNA cis splicing, via spliceosome	-	IEA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component