EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038922 (Gene tree)
Gene ID: 42586
Gene Symbol: Idh3b
Alias: -
Full Name: Isocitrate dehydrogenase 3b
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2992
Position: chr3R: 22016391-22019382
Accession: FBgn0038922
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0300788	-	1625	-	FBpp0290012	370 (aa)	-	Q9VD58
FBtr0084190	-	1861	-	FBpp0083588	370 (aa)	-	Q9VD58

Gene Model

Click here to download FBgn0038922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038922's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038922	Idh3b	99	55.827	WBGene00007993	idhb-1	97	55.827	Caenorhabditis_elegans
FBgn0038922	Idh3b	87	45.619	WBGene00009664	idha-1	89	45.619	Caenorhabditis_elegans
FBgn0038922	Idh3b	94	42.577	FBgn0027291	l(1)G0156	99	42.577	Drosophila_melanogaster
FBgn0038922	Idh3b	92	42.566	ENSMUSG00000032279	Idh3a	93	42.566	Mus_musculus
FBgn0038922	Idh3b	99	47.849	YNL037C		99	47.849	Saccharomyces_cerevisiae
FBgn0038922	Idh3b	87	30.499	YIL094C	LYS12	91	30.499	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004449	isocitrate dehydrogenase (NAD+) activity	-	IEA	Function
GO:0004449	isocitrate dehydrogenase (NAD+) activity	28104670.	TAS	Function
GO:0005759	mitochondrial matrix	28104670.	IDA	Component
GO:0006099	tricarboxylic acid cycle	28104670.	IMP	Process
GO:0035071	salivary gland cell autophagic cell death	28104670.	IMP	Process
GO:0035072	ecdysone-mediated induction of salivary gland cell autophagic cell death	17679695.	IMP	Process