EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0038951 (Gene tree)
Gene ID: 42619
Gene Symbol: CG5380
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1294 bases
Position: chr3R:22366080-22367373
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0083629	RNA_pol_Rpc34	PF05158.12	8.6e-73	1	1
FBpp0293863	RNA_pol_Rpc34	PF05158.12	8.6e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0084236	-	1022	-	FBpp0083629	293 (aa)	-	Q9VD25
FBtr0305320	-	1102	-	FBpp0293863	293 (aa)	-	Q9VD25

Gene Model

Click here to download FBgn0038951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0038951's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0038951	CG5380	99	49.667	ENSG00000132664	POLR3F	95	49.667	Homo_sapiens
FBgn0038951	CG5380	99	50.667	ENSAPOG00000008271	polr3f	94	51.724	Acanthochromis_polyacanthus
FBgn0038951	CG5380	99	49.667	ENSAMEG00000005222	POLR3F	95	49.667	Ailuropoda_melanoleuca
FBgn0038951	CG5380	98	48.322	ENSACIG00000006705	polr3f	97	48.322	Amphilophus_citrinellus
FBgn0038951	CG5380	99	50.667	ENSAOCG00000000687	polr3f	95	50.667	Amphiprion_ocellaris
FBgn0038951	CG5380	99	50.667	ENSAPEG00000015263	polr3f	95	50.667	Amphiprion_percula
FBgn0038951	CG5380	90	53.091	ENSATEG00000015539	polr3f	99	53.091	Anabas_testudineus
FBgn0038951	CG5380	90	52.364	ENSAPLG00000005533	POLR3F	99	52.364	Anas_platyrhynchos
FBgn0038951	CG5380	99	48.495	ENSACAG00000014293	POLR3F	96	48.495	Anolis_carolinensis
FBgn0038951	CG5380	99	49.667	ENSANAG00000026726	POLR3F	95	49.667	Aotus_nancymaae
FBgn0038951	CG5380	99	50.333	ENSACLG00000003615	polr3f	95	50.333	Astatotilapia_calliptera
FBgn0038951	CG5380	96	51.712	ENSAMXG00000036020	polr3f	93	51.712	Astyanax_mexicanus
FBgn0038951	CG5380	99	49.333	ENSBTAG00000008825	POLR3F	95	49.333	Bos_taurus
FBgn0038951	CG5380	99	33.788	WBGene00021112	W09C3.4	96	33.788	Caenorhabditis_elegans
FBgn0038951	CG5380	99	49.667	ENSCJAG00000005159	POLR3F	95	49.667	Callithrix_jacchus
FBgn0038951	CG5380	99	50.000	ENSCAFG00000005420	POLR3F	95	50.000	Canis_familiaris
FBgn0038951	CG5380	99	50.000	ENSCAFG00020027500	POLR3F	95	50.000	Canis_lupus_dingo
FBgn0038951	CG5380	99	49.333	ENSCHIG00000014743	POLR3F	95	49.333	Capra_hircus
FBgn0038951	CG5380	99	49.333	ENSTSYG00000004207	POLR3F	95	49.333	Carlito_syrichta
FBgn0038951	CG5380	99	49.667	ENSCPOG00000002400	POLR3F	95	49.667	Cavia_porcellus
FBgn0038951	CG5380	99	46.000	ENSCCAG00000021800	POLR3F	94	46.000	Cebus_capucinus
FBgn0038951	CG5380	99	49.333	ENSCATG00000019507	POLR3F	95	49.333	Cercocebus_atys
FBgn0038951	CG5380	99	49.333	ENSCLAG00000016296	POLR3F	95	49.333	Chinchilla_lanigera
FBgn0038951	CG5380	99	49.333	ENSCSAG00000011513	POLR3F	95	49.333	Chlorocebus_sabaeus
FBgn0038951	CG5380	70	46.457	ENSCHOG00000013268	POLR3F	68	46.457	Choloepus_hoffmanni
FBgn0038951	CG5380	90	50.909	ENSCPBG00000023473	POLR3F	99	50.909	Chrysemys_picta_bellii
FBgn0038951	CG5380	97	46.897	ENSCING00000001212	-	93	46.897	Ciona_intestinalis
FBgn0038951	CG5380	73	47.442	ENSCSAVG00000003340	-	96	49.693	Ciona_savignyi
FBgn0038951	CG5380	91	50.725	ENSCANG00000037390	POLR3F	95	50.725	Colobus_angolensis_palliatus
FBgn0038951	CG5380	99	49.667	ENSCGRG00001002032	Polr3f	95	49.667	Cricetulus_griseus_chok1gshd
FBgn0038951	CG5380	99	49.667	ENSCGRG00000010852	Polr3f	95	49.667	Cricetulus_griseus_crigri
FBgn0038951	CG5380	99	49.834	ENSCSEG00000001247	polr3f	95	49.834	Cynoglossus_semilaevis
FBgn0038951	CG5380	99	50.667	ENSCVAG00000007611	polr3f	95	50.667	Cyprinodon_variegatus
FBgn0038951	CG5380	96	51.724	ENSDARG00000012572	polr3f	92	51.724	Danio_rerio
FBgn0038951	CG5380	99	49.333	ENSDNOG00000010719	POLR3F	95	49.333	Dasypus_novemcinctus
FBgn0038951	CG5380	99	49.667	ENSDORG00000016352	Polr3f	95	49.667	Dipodomys_ordii
FBgn0038951	CG5380	99	48.675	ENSEBUG00000006783	polr3f	97	48.675	Eptatretus_burgeri
FBgn0038951	CG5380	99	49.667	ENSEASG00005002022	POLR3F	95	49.667	Equus_asinus_asinus
FBgn0038951	CG5380	99	49.667	ENSECAG00000009920	POLR3F	95	49.667	Equus_caballus
FBgn0038951	CG5380	67	39.594	ENSEEUG00000000184	POLR3F	62	39.594	Erinaceus_europaeus
FBgn0038951	CG5380	96	51.379	ENSELUG00000001558	polr3f	92	51.379	Esox_lucius
FBgn0038951	CG5380	99	49.667	ENSFCAG00000013828	POLR3F	95	49.667	Felis_catus
FBgn0038951	CG5380	90	52.364	ENSFALG00000007623	POLR3F	99	52.364	Ficedula_albicollis
FBgn0038951	CG5380	100	48.845	ENSFDAG00000002528	POLR3F	96	48.845	Fukomys_damarensis
FBgn0038951	CG5380	99	51.333	ENSFHEG00000006450	polr3f	95	51.333	Fundulus_heteroclitus
FBgn0038951	CG5380	99	48.667	ENSGALG00000008749	POLR3F	95	48.667	Gallus_gallus
FBgn0038951	CG5380	99	51.000	ENSGAFG00000003698	polr3f	95	51.000	Gambusia_affinis
FBgn0038951	CG5380	99	48.000	ENSGAGG00000006151	POLR3F	95	48.000	Gopherus_agassizii
FBgn0038951	CG5380	99	49.667	ENSGGOG00000011543	POLR3F	95	49.667	Gorilla_gorilla
FBgn0038951	CG5380	99	50.333	ENSHBUG00000013806	polr3f	95	50.333	Haplochromis_burtoni
FBgn0038951	CG5380	99	49.000	ENSHGLG00000011867	POLR3F	95	49.000	Heterocephalus_glaber_female
FBgn0038951	CG5380	99	49.000	ENSHGLG00100012577	POLR3F	95	49.000	Heterocephalus_glaber_male
FBgn0038951	CG5380	99	48.837	ENSHCOG00000011751	polr3f	95	48.837	Hippocampus_comes
FBgn0038951	CG5380	96	51.724	ENSIPUG00000013347	polr3f	92	51.724	Ictalurus_punctatus
FBgn0038951	CG5380	99	49.667	ENSSTOG00000013588	POLR3F	95	49.667	Ictidomys_tridecemlineatus
FBgn0038951	CG5380	99	49.667	ENSJJAG00000017513	Polr3f	95	49.667	Jaculus_jaculus
FBgn0038951	CG5380	75	56.957	ENSKMAG00000016495	polr3f	89	56.957	Kryptolebias_marmoratus
FBgn0038951	CG5380	75	56.957	ENSLBEG00000011998	polr3f	99	56.957	Labrus_bergylta
FBgn0038951	CG5380	97	49.492	ENSLACG00000009371	POLR3F	94	49.492	Latimeria_chalumnae
FBgn0038951	CG5380	96	50.690	ENSLOCG00000015701	polr3f	92	50.690	Lepisosteus_oculatus
FBgn0038951	CG5380	99	49.498	ENSLAFG00000004929	POLR3F	94	49.498	Loxodonta_africana
FBgn0038951	CG5380	99	49.333	ENSMFAG00000002227	POLR3F	95	49.333	Macaca_fascicularis
FBgn0038951	CG5380	90	52.364	ENSMMUG00000004143	POLR3F	99	52.364	Macaca_mulatta
FBgn0038951	CG5380	99	49.333	ENSMNEG00000033404	POLR3F	95	49.333	Macaca_nemestrina
FBgn0038951	CG5380	99	49.333	ENSMLEG00000021905	POLR3F	95	49.333	Mandrillus_leucophaeus
FBgn0038951	CG5380	99	50.667	ENSMAMG00000017975	polr3f	95	50.667	Mastacembelus_armatus
FBgn0038951	CG5380	99	50.000	ENSMZEG00005015134	polr3f	95	50.000	Maylandia_zebra
FBgn0038951	CG5380	99	48.667	ENSMGAG00000006691	POLR3F	95	48.667	Meleagris_gallopavo
FBgn0038951	CG5380	99	49.667	ENSMAUG00000020176	Polr3f	95	49.667	Mesocricetus_auratus
FBgn0038951	CG5380	99	49.667	ENSMICG00000044519	POLR3F	95	49.667	Microcebus_murinus
FBgn0038951	CG5380	99	50.000	ENSMOCG00000018352	Polr3f	95	50.000	Microtus_ochrogaster
FBgn0038951	CG5380	96	50.340	ENSMMOG00000018477	polr3f	99	50.340	Mola_mola
FBgn0038951	CG5380	99	48.667	ENSMODG00000005624	POLR3F	95	48.667	Monodelphis_domestica
FBgn0038951	CG5380	99	50.667	ENSMALG00000006685	polr3f	95	50.667	Monopterus_albus
FBgn0038951	CG5380	99	49.667	MGP_CAROLIEiJ_G0024385	Polr3f	95	49.667	Mus_caroli
FBgn0038951	CG5380	99	49.667	ENSMUSG00000027427	Polr3f	95	49.667	Mus_musculus
FBgn0038951	CG5380	99	49.667	MGP_PahariEiJ_G0025829	Polr3f	95	49.667	Mus_pahari
FBgn0038951	CG5380	99	49.667	MGP_SPRETEiJ_G0025304	Polr3f	95	49.667	Mus_spretus
FBgn0038951	CG5380	99	35.962	ENSMPUG00000001252	-	95	35.962	Mustela_putorius_furo
FBgn0038951	CG5380	99	49.667	ENSMLUG00000014844	POLR3F	95	49.667	Myotis_lucifugus
FBgn0038951	CG5380	99	49.667	ENSNGAG00000010898	Polr3f	95	49.667	Nannospalax_galili
FBgn0038951	CG5380	99	50.333	ENSNBRG00000020796	polr3f	95	50.333	Neolamprologus_brichardi
FBgn0038951	CG5380	99	49.667	ENSNLEG00000009778	POLR3F	95	49.667	Nomascus_leucogenys
FBgn0038951	CG5380	97	43.729	ENSMEUG00000010320	POLR3F	99	43.729	Notamacropus_eugenii
FBgn0038951	CG5380	99	49.333	ENSOPRG00000003385	POLR3F	95	49.333	Ochotona_princeps
FBgn0038951	CG5380	99	49.333	ENSODEG00000011521	POLR3F	95	49.333	Octodon_degus
FBgn0038951	CG5380	99	51.000	ENSONIG00000006858	polr3f	95	51.000	Oreochromis_niloticus
FBgn0038951	CG5380	99	48.333	ENSOANG00000001253	POLR3F	95	48.333	Ornithorhynchus_anatinus
FBgn0038951	CG5380	99	49.667	ENSOCUG00000015067	POLR3F	95	49.667	Oryctolagus_cuniculus
FBgn0038951	CG5380	99	51.000	ENSORLG00000022412	polr3f	95	51.000	Oryzias_latipes
FBgn0038951	CG5380	99	51.000	ENSORLG00020021944	polr3f	95	51.000	Oryzias_latipes_hni
FBgn0038951	CG5380	99	49.000	ENSOGAG00000002916	POLR3F	95	49.000	Otolemur_garnettii
FBgn0038951	CG5380	63	31.122	ENSOARG00000008647	-	71	31.122	Ovis_aries
FBgn0038951	CG5380	99	49.333	ENSOARG00000000315	-	95	49.333	Ovis_aries
FBgn0038951	CG5380	99	49.667	ENSPPAG00000036681	POLR3F	95	49.667	Pan_paniscus
FBgn0038951	CG5380	99	49.667	ENSPPRG00000024604	POLR3F	95	49.667	Panthera_pardus
FBgn0038951	CG5380	99	49.667	ENSPTIG00000020292	POLR3F	95	49.667	Panthera_tigris_altaica
FBgn0038951	CG5380	99	49.667	ENSPTRG00000013287	POLR3F	95	49.667	Pan_troglodytes
FBgn0038951	CG5380	99	49.333	ENSPANG00000025015	POLR3F	95	49.333	Papio_anubis
FBgn0038951	CG5380	95	51.736	ENSPKIG00000004427	polr3f	91	51.736	Paramormyrops_kingsleyae
FBgn0038951	CG5380	90	51.636	ENSPSIG00000016613	POLR3F	99	51.636	Pelodiscus_sinensis
FBgn0038951	CG5380	99	32.237	ENSPMGG00000018350	polr3f	93	33.333	Periophthalmus_magnuspinnatus
FBgn0038951	CG5380	99	50.000	ENSPEMG00000006966	Polr3f	95	50.000	Peromyscus_maniculatus_bairdii
FBgn0038951	CG5380	99	49.502	ENSPMAG00000005530	polr3f	96	49.502	Petromyzon_marinus
FBgn0038951	CG5380	99	48.667	ENSPCIG00000000908	POLR3F	80	48.667	Phascolarctos_cinereus
FBgn0038951	CG5380	99	51.000	ENSPFOG00000018334	polr3f	95	51.000	Poecilia_formosa
FBgn0038951	CG5380	99	51.000	ENSPLAG00000021803	polr3f	95	51.000	Poecilia_latipinna
FBgn0038951	CG5380	99	51.000	ENSPMEG00000013150	polr3f	95	51.000	Poecilia_mexicana
FBgn0038951	CG5380	99	51.000	ENSPREG00000005278	polr3f	95	51.000	Poecilia_reticulata
FBgn0038951	CG5380	99	49.667	ENSPPYG00000010737	POLR3F	95	49.667	Pongo_abelii
FBgn0038951	CG5380	99	49.667	ENSPCOG00000004543	POLR3F	95	49.667	Propithecus_coquereli
FBgn0038951	CG5380	99	49.667	ENSPVAG00000000403	POLR3F	95	49.667	Pteropus_vampyrus
FBgn0038951	CG5380	99	50.333	ENSPNYG00000016276	polr3f	95	50.333	Pundamilia_nyererei
FBgn0038951	CG5380	96	51.724	ENSPNAG00000005164	polr3f	92	51.724	Pygocentrus_nattereri
FBgn0038951	CG5380	99	49.667	ENSRNOG00000007548	Polr3f	81	49.667	Rattus_norvegicus
FBgn0038951	CG5380	99	49.333	ENSRBIG00000021268	POLR3F	95	49.333	Rhinopithecus_bieti
FBgn0038951	CG5380	99	49.333	ENSRROG00000039911	POLR3F	95	49.333	Rhinopithecus_roxellana
FBgn0038951	CG5380	99	49.667	ENSSBOG00000018207	POLR3F	95	49.667	Saimiri_boliviensis_boliviensis
FBgn0038951	CG5380	70	55.140	ENSSHAG00000018160	POLR3F	69	55.140	Sarcophilus_harrisii
FBgn0038951	CG5380	96	52.069	ENSSFOG00015022433	polr3f	93	52.069	Scleropages_formosus
FBgn0038951	CG5380	99	50.333	ENSSMAG00000021029	polr3f	95	50.333	Scophthalmus_maximus
FBgn0038951	CG5380	99	46.333	ENSSDUG00000022435	polr3f	94	46.333	Seriola_dumerili
FBgn0038951	CG5380	99	50.000	ENSSLDG00000012761	polr3f	95	50.000	Seriola_lalandi_dorsalis
FBgn0038951	CG5380	99	44.667	ENSSARG00000006039	POLR3F	95	44.667	Sorex_araneus
FBgn0038951	CG5380	99	48.333	ENSSPUG00000001873	POLR3F	95	48.333	Sphenodon_punctatus
FBgn0038951	CG5380	99	45.333	ENSSPAG00000002092	polr3f	94	45.183	Stegastes_partitus
FBgn0038951	CG5380	99	49.333	ENSSSCG00000007095	POLR3F	99	56.522	Sus_scrofa
FBgn0038951	CG5380	99	49.000	ENSTGUG00000005839	POLR3F	95	49.000	Taeniopygia_guttata
FBgn0038951	CG5380	99	51.000	ENSTRUG00000012101	polr3f	95	51.000	Takifugu_rubripes
FBgn0038951	CG5380	99	51.333	ENSTNIG00000006456	polr3f	95	51.333	Tetraodon_nigroviridis
FBgn0038951	CG5380	99	35.667	ENSTBEG00000007921	POLR3F	95	35.667	Tupaia_belangeri
FBgn0038951	CG5380	99	49.333	ENSTTRG00000002580	POLR3F	95	49.333	Tursiops_truncatus
FBgn0038951	CG5380	53	50.303	ENSUAMG00000024166	POLR3F	99	50.303	Ursus_americanus
FBgn0038951	CG5380	99	49.667	ENSUMAG00000024944	POLR3F	95	49.667	Ursus_maritimus
FBgn0038951	CG5380	99	50.000	ENSVPAG00000009063	POLR3F	95	50.000	Vicugna_pacos
FBgn0038951	CG5380	99	50.000	ENSVVUG00000012925	POLR3F	95	50.000	Vulpes_vulpes
FBgn0038951	CG5380	99	49.669	ENSXETG00000024898	polr3f	96	49.669	Xenopus_tropicalis
FBgn0038951	CG5380	90	53.818	ENSXCOG00000010301	polr3f	99	53.818	Xiphophorus_couchianus
FBgn0038951	CG5380	99	51.000	ENSXMAG00000004604	polr3f	95	51.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0006383	transcription by RNA polymerase III	-	IEA	Process