EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039175 (Gene tree)
Gene ID: 42888
Gene Symbol: beta-PheRS
Alias: -
Full Name: Phenylalanyl-tRNA synthetase%2C beta-subunit
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 2220 bases
Position: chr3R:24250460-24252679
Accession: FBgn0039175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0084021	B3_4	PF03483.17	1.4e-30	1	1
FBpp0084021	B5	PF03484.15	5.1e-19	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0084637	-	1960	-	FBpp0084021	589 (aa)	-	Q9VCA5

Gene Model

Click here to download FBgn0039175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039175	beta-PheRS	100	62.331	ENSG00000116120	FARSB	100	62.331	Homo_sapiens
FBgn0039175	beta-PheRS	100	63.575	ENSAPOG00000013072	farsb	100	60.708	Acanthochromis_polyacanthus
FBgn0039175	beta-PheRS	100	62.500	ENSAMEG00000005984	FARSB	100	62.500	Ailuropoda_melanoleuca
FBgn0039175	beta-PheRS	100	61.889	ENSACIG00000021623	farsb	100	61.889	Amphilophus_citrinellus
FBgn0039175	beta-PheRS	100	63.069	ENSAOCG00000004912	farsb	100	61.046	Amphiprion_ocellaris
FBgn0039175	beta-PheRS	100	63.069	ENSAPEG00000001153	farsb	100	60.202	Amphiprion_percula
FBgn0039175	beta-PheRS	100	63.406	ENSATEG00000021441	farsb	70	63.406	Anabas_testudineus
FBgn0039175	beta-PheRS	99	59.796	ENSAPLG00000010292	FARSB	99	59.796	Anas_platyrhynchos
FBgn0039175	beta-PheRS	100	61.383	ENSACAG00000004769	FARSB	98	61.383	Anolis_carolinensis
FBgn0039175	beta-PheRS	100	62.500	ENSANAG00000024637	FARSB	100	62.500	Aotus_nancymaae
FBgn0039175	beta-PheRS	100	63.575	ENSACLG00000013951	farsb	99	62.238	Astatotilapia_calliptera
FBgn0039175	beta-PheRS	85	61.829	ENSAMXG00000033881	farsb	100	61.829	Astyanax_mexicanus
FBgn0039175	beta-PheRS	96	62.081	ENSBTAG00000045523	-	100	62.081	Bos_taurus
FBgn0039175	beta-PheRS	100	63.176	ENSBTAG00000011649	FARSB	100	63.176	Bos_taurus
FBgn0039175	beta-PheRS	100	57.143	WBGene00001498	fars-3	100	57.143	Caenorhabditis_elegans
FBgn0039175	beta-PheRS	100	62.669	ENSCJAG00000012181	FARSB	100	62.669	Callithrix_jacchus
FBgn0039175	beta-PheRS	100	62.162	ENSCAFG00000016094	-	100	62.162	Canis_familiaris
FBgn0039175	beta-PheRS	100	60.202	ENSCAFG00020026684	FARSB	100	61.837	Canis_lupus_dingo
FBgn0039175	beta-PheRS	100	63.406	ENSCHIG00000014275	FARSB	100	63.406	Capra_hircus
FBgn0039175	beta-PheRS	100	61.993	ENSTSYG00000008461	FARSB	100	61.993	Carlito_syrichta
FBgn0039175	beta-PheRS	96	56.153	ENSCAPG00000016436	FARSB	99	56.153	Cavia_aperea
FBgn0039175	beta-PheRS	100	61.149	ENSCPOG00000013109	FARSB	100	61.149	Cavia_porcellus
FBgn0039175	beta-PheRS	100	59.291	ENSCCAG00000025840	FARSB	100	59.291	Cebus_capucinus
FBgn0039175	beta-PheRS	100	62.331	ENSCATG00000036168	FARSB	100	62.331	Cercocebus_atys
FBgn0039175	beta-PheRS	100	61.824	ENSCLAG00000011954	FARSB	100	61.824	Chinchilla_lanigera
FBgn0039175	beta-PheRS	100	62.331	ENSCSAG00000007806	FARSB	100	62.331	Chlorocebus_sabaeus
FBgn0039175	beta-PheRS	81	66.292	ENSCHOG00000011785	FARSB	81	66.292	Choloepus_hoffmanni
FBgn0039175	beta-PheRS	100	61.720	ENSCPBG00000019346	FARSB	98	61.720	Chrysemys_picta_bellii
FBgn0039175	beta-PheRS	99	57.095	ENSCING00000004180	-	99	57.095	Ciona_intestinalis
FBgn0039175	beta-PheRS	99	58.765	ENSCSAVG00000005346	-	99	58.765	Ciona_savignyi
FBgn0039175	beta-PheRS	97	61.713	ENSCANG00000036239	FARSB	100	61.713	Colobus_angolensis_palliatus
FBgn0039175	beta-PheRS	100	61.655	ENSCGRG00001022928	Farsb	100	61.655	Cricetulus_griseus_chok1gshd
FBgn0039175	beta-PheRS	100	61.655	ENSCGRG00000001513	Farsb	100	61.655	Cricetulus_griseus_crigri
FBgn0039175	beta-PheRS	100	63.069	ENSCSEG00000005415	farsb	100	59.218	Cynoglossus_semilaevis
FBgn0039175	beta-PheRS	76	62.361	ENSCVAG00000018815	farsb	98	62.361	Cyprinodon_variegatus
FBgn0039175	beta-PheRS	100	62.521	ENSDARG00000016864	farsb	100	62.521	Danio_rerio
FBgn0039175	beta-PheRS	100	61.824	ENSDNOG00000002511	FARSB	100	61.824	Dasypus_novemcinctus
FBgn0039175	beta-PheRS	100	62.669	ENSDORG00000011102	Farsb	100	62.669	Dipodomys_ordii
FBgn0039175	beta-PheRS	97	61.538	ENSETEG00000015080	FARSB	100	61.538	Echinops_telfairi
FBgn0039175	beta-PheRS	100	56.492	ENSEBUG00000006846	farsb	100	56.492	Eptatretus_burgeri
FBgn0039175	beta-PheRS	100	62.500	ENSEASG00005011297	FARSB	100	62.500	Equus_asinus_asinus
FBgn0039175	beta-PheRS	100	60.359	ENSECAG00000023086	FARSB	99	62.523	Equus_caballus
FBgn0039175	beta-PheRS	90	59.184	ENSEEUG00000007441	FARSB	91	59.184	Erinaceus_europaeus
FBgn0039175	beta-PheRS	97	61.111	ENSELUG00000014767	farsb	99	61.111	Esox_lucius
FBgn0039175	beta-PheRS	100	62.331	ENSFCAG00000026772	FARSB	100	62.331	Felis_catus
FBgn0039175	beta-PheRS	97	60.908	ENSFALG00000006739	FARSB	96	60.908	Ficedula_albicollis
FBgn0039175	beta-PheRS	100	62.162	ENSFDAG00000008871	FARSB	100	62.162	Fukomys_damarensis
FBgn0039175	beta-PheRS	100	63.069	ENSFHEG00000020939	farsb	98	63.736	Fundulus_heteroclitus
FBgn0039175	beta-PheRS	92	62.063	ENSGMOG00000013047	farsb	99	62.063	Gadus_morhua
FBgn0039175	beta-PheRS	100	61.720	ENSGALG00000005236	FARSB	100	61.720	Gallus_gallus
FBgn0039175	beta-PheRS	100	62.732	ENSGAFG00000020900	farsb	100	53.010	Gambusia_affinis
FBgn0039175	beta-PheRS	92	63.720	ENSGACG00000000261	farsb	99	63.720	Gasterosteus_aculeatus
FBgn0039175	beta-PheRS	100	61.889	ENSGAGG00000016575	FARSB	98	61.889	Gopherus_agassizii
FBgn0039175	beta-PheRS	100	63.744	ENSHBUG00000022379	farsb	100	62.162	Haplochromis_burtoni
FBgn0039175	beta-PheRS	100	61.993	ENSHGLG00000015965	FARSB	100	61.993	Heterocephalus_glaber_female
FBgn0039175	beta-PheRS	100	61.993	ENSHGLG00100001035	FARSB	100	61.993	Heterocephalus_glaber_male
FBgn0039175	beta-PheRS	91	58.473	ENSHCOG00000016462	farsb	100	58.473	Hippocampus_comes
FBgn0039175	beta-PheRS	100	62.458	ENSIPUG00000002754	farsb	100	62.458	Ictalurus_punctatus
FBgn0039175	beta-PheRS	100	62.331	ENSSTOG00000016169	FARSB	100	62.331	Ictidomys_tridecemlineatus
FBgn0039175	beta-PheRS	100	61.824	ENSJJAG00000003267	Farsb	100	61.824	Jaculus_jaculus
FBgn0039175	beta-PheRS	100	57.841	ENSKMAG00000005363	farsb	100	57.841	Kryptolebias_marmoratus
FBgn0039175	beta-PheRS	100	63.744	ENSLBEG00000018127	farsb	70	63.744	Labrus_bergylta
FBgn0039175	beta-PheRS	100	63.345	ENSLACG00000002551	FARSB	100	63.345	Latimeria_chalumnae
FBgn0039175	beta-PheRS	100	61.720	ENSLOCG00000004136	farsb	100	61.720	Lepisosteus_oculatus
FBgn0039175	beta-PheRS	100	63.069	ENSLAFG00000015659	FARSB	100	63.069	Loxodonta_africana
FBgn0039175	beta-PheRS	100	62.162	ENSMFAG00000036645	FARSB	100	62.162	Macaca_fascicularis
FBgn0039175	beta-PheRS	100	59.797	ENSMMUG00000007685	FARSB	100	59.797	Macaca_mulatta
FBgn0039175	beta-PheRS	100	61.993	ENSMNEG00000030672	FARSB	100	61.993	Macaca_nemestrina
FBgn0039175	beta-PheRS	100	62.331	ENSMLEG00000042060	FARSB	100	62.331	Mandrillus_leucophaeus
FBgn0039175	beta-PheRS	100	63.069	ENSMAMG00000011835	farsb	100	58.010	Mastacembelus_armatus
FBgn0039175	beta-PheRS	96	62.238	ENSMZEG00005004544	farsb	100	62.238	Maylandia_zebra
FBgn0039175	beta-PheRS	95	60.924	ENSMGAG00000004670	FARSB	100	60.924	Meleagris_gallopavo
FBgn0039175	beta-PheRS	66	45.823	ENSMAUG00000017805	Farsb	91	45.823	Mesocricetus_auratus
FBgn0039175	beta-PheRS	100	62.669	ENSMICG00000002495	FARSB	100	62.669	Microcebus_murinus
FBgn0039175	beta-PheRS	100	62.331	ENSMOCG00000003181	Farsb	100	62.331	Microtus_ochrogaster
FBgn0039175	beta-PheRS	100	58.249	ENSMMOG00000006265	farsb	100	58.249	Mola_mola
FBgn0039175	beta-PheRS	100	62.563	ENSMODG00000021192	FARSB	100	62.563	Monodelphis_domestica
FBgn0039175	beta-PheRS	94	62.523	ENSMALG00000021188	farsb	92	62.523	Monopterus_albus
FBgn0039175	beta-PheRS	100	62.669	MGP_CAROLIEiJ_G0014310	Farsb	100	62.669	Mus_caroli
FBgn0039175	beta-PheRS	100	62.500	ENSMUSG00000026245	Farsb	100	62.500	Mus_musculus
FBgn0039175	beta-PheRS	100	62.500	MGP_PahariEiJ_G0027548	Farsb	100	62.500	Mus_pahari
FBgn0039175	beta-PheRS	100	62.331	MGP_SPRETEiJ_G0015116	Farsb	100	62.331	Mus_spretus
FBgn0039175	beta-PheRS	100	62.669	ENSMPUG00000016677	FARSB	100	62.669	Mustela_putorius_furo
FBgn0039175	beta-PheRS	100	62.838	ENSMLUG00000010904	FARSB	100	62.838	Myotis_lucifugus
FBgn0039175	beta-PheRS	100	61.486	ENSNGAG00000014602	Farsb	100	61.486	Nannospalax_galili
FBgn0039175	beta-PheRS	100	63.744	ENSNBRG00000003198	farsb	100	61.616	Neolamprologus_brichardi
FBgn0039175	beta-PheRS	100	62.500	ENSNLEG00000009638	FARSB	100	62.500	Nomascus_leucogenys
FBgn0039175	beta-PheRS	100	55.649	ENSMEUG00000010798	FARSB	100	55.649	Notamacropus_eugenii
FBgn0039175	beta-PheRS	89	54.286	ENSOPRG00000003292	FARSB	89	54.286	Ochotona_princeps
FBgn0039175	beta-PheRS	100	61.486	ENSODEG00000005451	FARSB	100	61.486	Octodon_degus
FBgn0039175	beta-PheRS	100	64.081	ENSONIG00000014639	farsb	100	64.081	Oreochromis_niloticus
FBgn0039175	beta-PheRS	91	61.781	ENSOANG00000015387	FARSB	100	61.781	Ornithorhynchus_anatinus
FBgn0039175	beta-PheRS	91	62.731	ENSOCUG00000007828	FARSB	94	62.731	Oryctolagus_cuniculus
FBgn0039175	beta-PheRS	100	61.720	ENSORLG00000009135	farsb	100	60.034	Oryzias_latipes
FBgn0039175	beta-PheRS	100	61.720	ENSORLG00015001072	farsb	100	54.591	Oryzias_latipes_hsok
FBgn0039175	beta-PheRS	100	62.395	ENSOMEG00000019009	farsb	100	59.228	Oryzias_melastigma
FBgn0039175	beta-PheRS	100	57.667	ENSOGAG00000010125	FARSB	100	57.667	Otolemur_garnettii
FBgn0039175	beta-PheRS	100	63.406	ENSOARG00000020329	FARSB	100	63.406	Ovis_aries
FBgn0039175	beta-PheRS	100	62.669	ENSPPAG00000039268	FARSB	100	62.669	Pan_paniscus
FBgn0039175	beta-PheRS	100	62.162	ENSPPRG00000010687	FARSB	100	62.162	Panthera_pardus
FBgn0039175	beta-PheRS	100	61.824	ENSPTIG00000004299	FARSB	100	61.824	Panthera_tigris_altaica
FBgn0039175	beta-PheRS	100	62.669	ENSPTRG00000012974	FARSB	100	62.669	Pan_troglodytes
FBgn0039175	beta-PheRS	100	62.331	ENSPANG00000016304	FARSB	100	62.331	Papio_anubis
FBgn0039175	beta-PheRS	100	62.500	ENSPKIG00000006661	farsb	100	62.500	Paramormyrops_kingsleyae
FBgn0039175	beta-PheRS	99	60.914	ENSPSIG00000006248	FARSB	99	60.914	Pelodiscus_sinensis
FBgn0039175	beta-PheRS	83	62.372	ENSPMGG00000002815	farsb	99	62.372	Periophthalmus_magnuspinnatus
FBgn0039175	beta-PheRS	100	60.980	ENSPEMG00000003131	Farsb	100	60.980	Peromyscus_maniculatus_bairdii
FBgn0039175	beta-PheRS	100	62.395	ENSPCIG00000019458	FARSB	100	62.395	Phascolarctos_cinereus
FBgn0039175	beta-PheRS	100	63.575	ENSPLAG00000001104	farsb	99	56.162	Poecilia_latipinna
FBgn0039175	beta-PheRS	100	63.575	ENSPMEG00000017658	farsb	99	56.162	Poecilia_mexicana
FBgn0039175	beta-PheRS	100	63.912	ENSPREG00000010583	farsb	100	57.336	Poecilia_reticulata
FBgn0039175	beta-PheRS	100	62.331	ENSPPYG00000013221	FARSB	100	62.331	Pongo_abelii
FBgn0039175	beta-PheRS	85	57.285	ENSPCAG00000002757	FARSB	85	57.285	Procavia_capensis
FBgn0039175	beta-PheRS	64	71.429	ENSPCOG00000028852	FARSB	100	71.429	Propithecus_coquereli
FBgn0039175	beta-PheRS	100	61.824	ENSPVAG00000006985	FARSB	100	61.824	Pteropus_vampyrus
FBgn0039175	beta-PheRS	86	63.025	ENSPNYG00000011433	farsb	95	63.025	Pundamilia_nyererei
FBgn0039175	beta-PheRS	100	62.963	ENSPNAG00000021802	farsb	100	62.963	Pygocentrus_nattereri
FBgn0039175	beta-PheRS	100	62.500	ENSRNOG00000014119	Farsb	100	62.500	Rattus_norvegicus
FBgn0039175	beta-PheRS	92	63.100	ENSRBIG00000033191	FARSB	97	62.936	Rhinopithecus_bieti
FBgn0039175	beta-PheRS	100	62.331	ENSRROG00000029388	FARSB	100	62.331	Rhinopithecus_roxellana
FBgn0039175	beta-PheRS	100	44.992	YLR060W	FRS1	100	44.992	Saccharomyces_cerevisiae
FBgn0039175	beta-PheRS	100	56.757	ENSSBOG00000019084	FARSB	100	56.757	Saimiri_boliviensis_boliviensis
FBgn0039175	beta-PheRS	92	58.439	ENSSHAG00000015752	FARSB	99	58.439	Sarcophilus_harrisii
FBgn0039175	beta-PheRS	100	61.186	ENSSFOG00015007850	farsb	100	61.186	Scleropages_formosus
FBgn0039175	beta-PheRS	100	62.901	ENSSMAG00000020668	farsb	100	61.551	Scophthalmus_maximus
FBgn0039175	beta-PheRS	100	64.081	ENSSDUG00000009685	farsb	100	60.738	Seriola_dumerili
FBgn0039175	beta-PheRS	100	63.744	ENSSLDG00000025206	farsb	100	61.448	Seriola_lalandi_dorsalis
FBgn0039175	beta-PheRS	61	65.772	ENSSARG00000005655	-	66	65.772	Sorex_araneus
FBgn0039175	beta-PheRS	95	57.876	ENSSPUG00000002245	FARSB	100	58.009	Sphenodon_punctatus
FBgn0039175	beta-PheRS	100	64.081	ENSSPAG00000007367	farsb	69	64.081	Stegastes_partitus
FBgn0039175	beta-PheRS	100	62.331	ENSSSCG00000016226	-	100	62.331	Sus_scrofa
FBgn0039175	beta-PheRS	100	58.108	ENSSSCG00000032016	-	100	58.108	Sus_scrofa
FBgn0039175	beta-PheRS	97	60.384	ENSTGUG00000007788	FARSB	99	60.384	Taeniopygia_guttata
FBgn0039175	beta-PheRS	100	62.901	ENSTRUG00000009483	farsb	70	62.901	Takifugu_rubripes
FBgn0039175	beta-PheRS	100	62.395	ENSTNIG00000014310	farsb	100	62.395	Tetraodon_nigroviridis
FBgn0039175	beta-PheRS	100	39.696	ENSTBEG00000003136	FARSB	100	39.696	Tupaia_belangeri
FBgn0039175	beta-PheRS	88	65.174	ENSTTRG00000009082	FARSB	88	65.174	Tursiops_truncatus
FBgn0039175	beta-PheRS	85	59.960	ENSUAMG00000024613	FARSB	99	59.960	Ursus_americanus
FBgn0039175	beta-PheRS	100	62.331	ENSUMAG00000017995	FARSB	100	62.331	Ursus_maritimus
FBgn0039175	beta-PheRS	92	61.029	ENSVPAG00000006844	FARSB	100	61.029	Vicugna_pacos
FBgn0039175	beta-PheRS	100	61.993	ENSVVUG00000024025	FARSB	100	61.993	Vulpes_vulpes
FBgn0039175	beta-PheRS	100	61.279	ENSXETG00000002934	farsb	100	61.279	Xenopus_tropicalis
FBgn0039175	beta-PheRS	100	63.069	ENSXMAG00000008280	farsb	100	55.161	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000287	magnesium ion binding	-	IEA	Function
GO:0002161	aminoacyl-tRNA editing activity	25427601.	IMP	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004826	phenylalanine-tRNA ligase activity	21873635.	IBA	Function
GO:0004826	phenylalanine-tRNA ligase activity	25427601.	IDA	Function
GO:0004826	phenylalanine-tRNA ligase activity	26761199.	TAS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	26761199.	TAS	Component
GO:0006432	phenylalanyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	25427601.	IDA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	26761199.	TAS	Process
GO:0009328	phenylalanine-tRNA ligase complex	21873635.	IBA	Component