EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039210 (Gene tree)
Gene ID: 42931
Gene Symbol: CG13625
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2094 bases
Position: chr3R:24583067-24585160
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0084051	Bud13	PF09736.9	3.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0084671	-	2094	-	FBpp0084051	647 (aa)	-	Q9VC60

Gene Model

Click here to download FBgn0039210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039210	CG13625	99	41.714	ENSG00000137656	BUD13	100	39.437	Homo_sapiens
FBgn0039210	CG13625	99	41.628	ENSAPOG00000013402	si:dkeyp-69c1.6	99	33.731	Acanthochromis_polyacanthus
FBgn0039210	CG13625	99	32.720	ENSAMEG00000008712	BUD13	100	33.051	Ailuropoda_melanoleuca
FBgn0039210	CG13625	99	40.088	ENSACIG00000003246	si:dkeyp-69c1.6	99	40.220	Amphilophus_citrinellus
FBgn0039210	CG13625	99	43.392	ENSAOCG00000007679	si:dkeyp-69c1.6	99	35.863	Amphiprion_ocellaris
FBgn0039210	CG13625	99	41.080	ENSAPEG00000023734	si:dkeyp-69c1.6	99	34.206	Amphiprion_percula
FBgn0039210	CG13625	99	39.186	ENSATEG00000021254	si:dkeyp-69c1.6	98	33.784	Anabas_testudineus
FBgn0039210	CG13625	70	37.684	ENSACAG00000001884	BUD13	74	37.500	Anolis_carolinensis
FBgn0039210	CG13625	99	32.097	ENSANAG00000035220	BUD13	99	31.172	Aotus_nancymaae
FBgn0039210	CG13625	79	53.061	ENSACLG00000021004	-	93	53.061	Astatotilapia_calliptera
FBgn0039210	CG13625	99	39.387	ENSACLG00000020797	si:dkeyp-69c1.6	99	33.432	Astatotilapia_calliptera
FBgn0039210	CG13625	99	39.623	ENSAMXG00000004165	si:dkeyp-69c1.6	99	32.672	Astyanax_mexicanus
FBgn0039210	CG13625	99	33.992	ENSBTAG00000016855	BUD13	100	34.258	Bos_taurus
FBgn0039210	CG13625	56	39.646	WBGene00011142	R08D7.1	99	39.551	Caenorhabditis_elegans
FBgn0039210	CG13625	99	32.973	ENSCJAG00000012570	BUD13	100	31.812	Callithrix_jacchus
FBgn0039210	CG13625	99	31.903	ENSCAFG00000013400	BUD13	100	36.416	Canis_familiaris
FBgn0039210	CG13625	99	31.572	ENSCAFG00020002396	BUD13	100	36.416	Canis_lupus_dingo
FBgn0039210	CG13625	99	33.944	ENSCHIG00000011480	BUD13	100	33.148	Capra_hircus
FBgn0039210	CG13625	72	37.175	ENSTSYG00000007285	BUD13	100	32.823	Carlito_syrichta
FBgn0039210	CG13625	87	34.255	ENSCAPG00000009620	BUD13	98	33.735	Cavia_aperea
FBgn0039210	CG13625	99	31.704	ENSCPOG00000014440	BUD13	100	32.276	Cavia_porcellus
FBgn0039210	CG13625	99	41.176	ENSCCAG00000024422	BUD13	100	41.176	Cebus_capucinus
FBgn0039210	CG13625	99	30.994	ENSCATG00000042919	BUD13	100	31.232	Cercocebus_atys
FBgn0039210	CG13625	70	34.773	ENSCLAG00000014184	BUD13	76	34.801	Chinchilla_lanigera
FBgn0039210	CG13625	71	37.002	ENSCSAG00000002732	BUD13	100	31.944	Chlorocebus_sabaeus
FBgn0039210	CG13625	99	31.983	ENSCHOG00000008596	BUD13	100	32.653	Choloepus_hoffmanni
FBgn0039210	CG13625	62	36.386	ENSCPBG00000020276	BUD13	95	35.925	Chrysemys_picta_bellii
FBgn0039210	CG13625	62	35.208	ENSCING00000006692	-	73	33.741	Ciona_intestinalis
FBgn0039210	CG13625	99	31.044	ENSCANG00000042795	BUD13	100	31.683	Colobus_angolensis_palliatus
FBgn0039210	CG13625	70	36.902	ENSCGRG00001019626	Bud13	100	31.849	Cricetulus_griseus_chok1gshd
FBgn0039210	CG13625	99	32.908	ENSCGRG00000013879	Bud13	100	31.984	Cricetulus_griseus_crigri
FBgn0039210	CG13625	99	41.781	ENSCSEG00000010161	si:dkeyp-69c1.6	94	41.781	Cynoglossus_semilaevis
FBgn0039210	CG13625	100	40.436	ENSCVAG00000002633	si:dkeyp-69c1.6	99	34.384	Cyprinodon_variegatus
FBgn0039210	CG13625	70	35.948	ENSDARG00000006666	si:dkeyp-69c1.6	99	33.283	Danio_rerio
FBgn0039210	CG13625	99	33.239	ENSDNOG00000042988	BUD13	100	32.227	Dasypus_novemcinctus
FBgn0039210	CG13625	99	30.966	ENSDORG00000012405	Bud13	100	32.192	Dipodomys_ordii
FBgn0039210	CG13625	54	31.844	ENSEBUG00000012952	si:dkeyp-69c1.6	70	32.507	Eptatretus_burgeri
FBgn0039210	CG13625	99	33.378	ENSECAG00000008863	BUD13	100	32.075	Equus_caballus
FBgn0039210	CG13625	76	34.398	ENSEEUG00000009332	BUD13	86	34.357	Erinaceus_europaeus
FBgn0039210	CG13625	53	39.769	ENSELUG00000011399	si:dkeyp-69c1.6	98	38.889	Esox_lucius
FBgn0039210	CG13625	99	32.138	ENSFCAG00000011856	BUD13	100	31.984	Felis_catus
FBgn0039210	CG13625	80	40.293	ENSFALG00000005527	BUD13	98	40.000	Ficedula_albicollis
FBgn0039210	CG13625	99	32.432	ENSFDAG00000000853	BUD13	100	31.806	Fukomys_damarensis
FBgn0039210	CG13625	99	39.340	ENSFHEG00000017085	si:dkeyp-69c1.6	99	32.678	Fundulus_heteroclitus
FBgn0039210	CG13625	55	35.772	ENSGMOG00000002316	si:dkeyp-69c1.6	98	35.598	Gadus_morhua
FBgn0039210	CG13625	99	36.726	ENSGALG00000025882	BUD13	99	35.973	Gallus_gallus
FBgn0039210	CG13625	99	39.675	ENSGAFG00000000968	si:dkeyp-69c1.6	99	33.383	Gambusia_affinis
FBgn0039210	CG13625	99	37.209	ENSGACG00000020632	si:dkeyp-69c1.6	98	31.066	Gasterosteus_aculeatus
FBgn0039210	CG13625	59	34.509	ENSGAGG00000010543	BUD13	73	36.104	Gopherus_agassizii
FBgn0039210	CG13625	99	33.427	ENSHGLG00000013562	BUD13	100	33.424	Heterocephalus_glaber_female
FBgn0039210	CG13625	99	37.079	ENSHCOG00000000187	si:dkeyp-69c1.6	98	34.737	Hippocampus_comes
FBgn0039210	CG13625	99	37.647	ENSIPUG00000001490	bud13	98	32.165	Ictalurus_punctatus
FBgn0039210	CG13625	99	31.983	ENSSTOG00000002302	BUD13	100	31.694	Ictidomys_tridecemlineatus
FBgn0039210	CG13625	73	33.905	ENSJJAG00000010737	Bud13	71	36.059	Jaculus_jaculus
FBgn0039210	CG13625	99	40.489	ENSKMAG00000022255	si:dkeyp-69c1.6	99	38.756	Kryptolebias_marmoratus
FBgn0039210	CG13625	99	40.722	ENSLBEG00000015760	si:dkeyp-69c1.6	98	38.902	Labrus_bergylta
FBgn0039210	CG13625	98	38.442	ENSLOCG00000005915	si:dkeyp-69c1.6	98	33.181	Lepisosteus_oculatus
FBgn0039210	CG13625	99	31.586	ENSLAFG00000010279	BUD13	100	32.497	Loxodonta_africana
FBgn0039210	CG13625	99	32.456	ENSMFAG00000036204	BUD13	100	31.944	Macaca_fascicularis
FBgn0039210	CG13625	99	40.571	ENSMMUG00000020002	BUD13	100	42.771	Macaca_mulatta
FBgn0039210	CG13625	72	37.398	ENSMNEG00000039484	BUD13	94	47.445	Macaca_nemestrina
FBgn0039210	CG13625	74	37.476	ENSMLEG00000010496	BUD13	100	32.867	Mandrillus_leucophaeus
FBgn0039210	CG13625	99	39.294	ENSMAMG00000018919	si:dkeyp-69c1.6	98	39.326	Mastacembelus_armatus
FBgn0039210	CG13625	85	32.534	ENSMZEG00005018960	si:dkeyp-69c1.6	94	32.534	Maylandia_zebra
FBgn0039210	CG13625	99	34.577	ENSMZEG00005018890	si:dkeyp-69c1.6	99	35.312	Maylandia_zebra
FBgn0039210	CG13625	73	49.356	ENSMZEG00005018919	-	93	49.485	Maylandia_zebra
FBgn0039210	CG13625	60	41.410	ENSMZEG00005018935	-	86	38.983	Maylandia_zebra
FBgn0039210	CG13625	70	40.299	ENSMZEG00005018950	-	91	40.410	Maylandia_zebra
FBgn0039210	CG13625	56	35.784	ENSMZEG00005018954	-	84	35.326	Maylandia_zebra
FBgn0039210	CG13625	64	34.423	ENSMGAG00000003081	BUD13	88	33.543	Meleagris_gallopavo
FBgn0039210	CG13625	71	37.423	ENSMAUG00000008604	Bud13	82	35.700	Mesocricetus_auratus
FBgn0039210	CG13625	99	41.327	ENSMICG00000002320	BUD13	100	39.908	Microcebus_murinus
FBgn0039210	CG13625	70	37.109	ENSMOCG00000020780	Bud13	100	31.793	Microtus_ochrogaster
FBgn0039210	CG13625	72	44.604	ENSMMOG00000018777	si:dkeyp-69c1.6	97	40.000	Mola_mola
FBgn0039210	CG13625	74	35.229	ENSMODG00000013825	BUD13	100	32.270	Monodelphis_domestica
FBgn0039210	CG13625	66	38.703	ENSMALG00000007372	si:dkeyp-69c1.6	99	34.111	Monopterus_albus
FBgn0039210	CG13625	99	32.410	MGP_CAROLIEiJ_G0032160	Bud13	100	31.572	Mus_caroli
FBgn0039210	CG13625	99	32.039	ENSMUSG00000032077	Bud13	100	32.316	Mus_musculus
FBgn0039210	CG13625	99	30.629	MGP_SPRETEiJ_G0033299	Bud13	100	31.939	Mus_spretus
FBgn0039210	CG13625	99	32.517	ENSMPUG00000004040	BUD13	100	32.520	Mustela_putorius_furo
FBgn0039210	CG13625	99	34.195	ENSMLUG00000023889	-	63	51.163	Myotis_lucifugus
FBgn0039210	CG13625	99	32.899	ENSMLUG00000030637	-	100	31.983	Myotis_lucifugus
FBgn0039210	CG13625	99	33.060	ENSMLUG00000014006	-	100	33.108	Myotis_lucifugus
FBgn0039210	CG13625	99	31.687	ENSNGAG00000015401	Bud13	100	31.694	Nannospalax_galili
FBgn0039210	CG13625	95	38.415	ENSNBRG00000007225	si:dkeyp-69c1.6	99	33.904	Neolamprologus_brichardi
FBgn0039210	CG13625	99	32.081	ENSNLEG00000007329	BUD13	100	32.143	Nomascus_leucogenys
FBgn0039210	CG13625	72	37.870	ENSMEUG00000002945	-	76	36.024	Notamacropus_eugenii
FBgn0039210	CG13625	59	30.711	ENSMEUG00000005039	-	95	30.457	Notamacropus_eugenii
FBgn0039210	CG13625	78	34.312	ENSOPRG00000016230	BUD13	79	35.649	Ochotona_princeps
FBgn0039210	CG13625	99	34.337	ENSODEG00000009553	BUD13	100	34.739	Octodon_degus
FBgn0039210	CG13625	51	38.554	ENSOANG00000004370	-	78	46.364	Ornithorhynchus_anatinus
FBgn0039210	CG13625	99	31.766	ENSOCUG00000004615	BUD13	100	32.011	Oryctolagus_cuniculus
FBgn0039210	CG13625	99	40.741	ENSORLG00000005682	si:dkeyp-69c1.6	98	34.033	Oryzias_latipes
FBgn0039210	CG13625	99	39.716	ENSORLG00020008669	si:dkeyp-69c1.6	98	32.875	Oryzias_latipes_hni
FBgn0039210	CG13625	99	32.827	ENSORLG00015014456	si:dkeyp-69c1.6	98	32.875	Oryzias_latipes_hsok
FBgn0039210	CG13625	99	38.551	ENSOMEG00000018921	si:dkeyp-69c1.6	96	33.534	Oryzias_melastigma
FBgn0039210	CG13625	99	32.276	ENSOGAG00000009973	BUD13	100	33.615	Otolemur_garnettii
FBgn0039210	CG13625	72	38.314	ENSOARG00000001906	BUD13	100	33.708	Ovis_aries
FBgn0039210	CG13625	99	31.293	ENSPPAG00000040801	BUD13	100	32.555	Pan_paniscus
FBgn0039210	CG13625	99	32.221	ENSPPRG00000017223	BUD13	100	32.849	Panthera_pardus
FBgn0039210	CG13625	72	44.828	ENSPTIG00000010320	BUD13	98	34.797	Panthera_tigris_altaica
FBgn0039210	CG13625	99	31.293	ENSPTRG00000004311	BUD13	100	32.555	Pan_troglodytes
FBgn0039210	CG13625	99	32.323	ENSPANG00000014015	BUD13	100	31.868	Papio_anubis
FBgn0039210	CG13625	99	38.500	ENSPKIG00000015986	si:dkeyp-69c1.6	91	33.383	Paramormyrops_kingsleyae
FBgn0039210	CG13625	62	36.779	ENSPSIG00000013803	BUD13	91	36.124	Pelodiscus_sinensis
FBgn0039210	CG13625	100	44.022	ENSPMGG00000005014	si:dkeyp-69c1.6	99	44.022	Periophthalmus_magnuspinnatus
FBgn0039210	CG13625	77	36.330	ENSPEMG00000016113	Bud13	86	53.788	Peromyscus_maniculatus_bairdii
FBgn0039210	CG13625	100	39.352	ENSPFOG00000018569	si:dkeyp-69c1.6	99	33.683	Poecilia_formosa
FBgn0039210	CG13625	100	41.582	ENSPLAG00000007067	si:dkeyp-69c1.6	99	33.837	Poecilia_latipinna
FBgn0039210	CG13625	100	39.120	ENSPMEG00000002258	si:dkeyp-69c1.6	99	33.982	Poecilia_mexicana
FBgn0039210	CG13625	100	38.967	ENSPREG00000017161	si:dkeyp-69c1.6	99	32.214	Poecilia_reticulata
FBgn0039210	CG13625	70	37.381	ENSPCAG00000011376	BUD13	100	31.658	Procavia_capensis
FBgn0039210	CG13625	73	37.838	ENSPVAG00000017826	BUD13	80	37.205	Pteropus_vampyrus
FBgn0039210	CG13625	62	39.111	ENSPNAG00000015803	si:dkeyp-69c1.6	99	33.383	Pygocentrus_nattereri
FBgn0039210	CG13625	99	31.812	ENSRNOG00000018665	Bud13	100	32.624	Rattus_norvegicus
FBgn0039210	CG13625	99	31.672	ENSRBIG00000001857	BUD13	100	31.616	Rhinopithecus_bieti
FBgn0039210	CG13625	99	31.672	ENSRROG00000034492	BUD13	100	31.616	Rhinopithecus_roxellana
FBgn0039210	CG13625	73	45.161	ENSSBOG00000033988	BUD13	75	45.161	Saimiri_boliviensis_boliviensis
FBgn0039210	CG13625	73	35.327	ENSSHAG00000001955	-	90	35.197	Sarcophilus_harrisii
FBgn0039210	CG13625	73	32.640	ENSSFOG00015005820	si:dkeyp-69c1.6	98	31.895	Scleropages_formosus
FBgn0039210	CG13625	80	39.344	ENSSMAG00000010031	si:dkeyp-69c1.6	99	38.657	Scophthalmus_maximus
FBgn0039210	CG13625	99	39.545	ENSSDUG00000004190	si:dkeyp-69c1.6	97	39.091	Seriola_dumerili
FBgn0039210	CG13625	99	40.191	ENSSLDG00000017222	si:dkeyp-69c1.6	98	33.945	Seriola_lalandi_dorsalis
FBgn0039210	CG13625	87	33.219	ENSSPUG00000005673	BUD13	97	36.364	Sphenodon_punctatus
FBgn0039210	CG13625	99	43.750	ENSSPAG00000008190	si:dkeyp-69c1.6	99	36.692	Stegastes_partitus
FBgn0039210	CG13625	76	37.828	ENSSSCG00000015065	BUD13	99	35.604	Sus_scrofa
FBgn0039210	CG13625	74	37.305	ENSTGUG00000000141	-	74	43.541	Taeniopygia_guttata
FBgn0039210	CG13625	94	40.431	ENSTRUG00000017101	si:dkeyp-69c1.6	99	37.613	Takifugu_rubripes
FBgn0039210	CG13625	99	37.416	ENSTNIG00000009983	si:dkeyp-69c1.6	98	37.277	Tetraodon_nigroviridis
FBgn0039210	CG13625	77	41.232	ENSTTRG00000011564	BUD13	64	51.938	Tursiops_truncatus
FBgn0039210	CG13625	95	32.761	ENSUAMG00000019898	BUD13	100	32.904	Ursus_americanus
FBgn0039210	CG13625	99	34.000	ENSUMAG00000003691	BUD13	100	34.241	Ursus_maritimus
FBgn0039210	CG13625	96	30.093	ENSVVUG00000025196	BUD13	100	36.628	Vulpes_vulpes
FBgn0039210	CG13625	100	39.088	ENSXETG00000003767	bud13	98	38.983	Xenopus_tropicalis
FBgn0039210	CG13625	100	38.369	ENSXMAG00000010906	si:dkeyp-69c1.6	99	32.733	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0003723	RNA binding	-	ISS	Function
GO:0005684	U2-type spliceosomal complex	21873635.	IBA	Component
GO:0070274	RES complex	21873635.	IBA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component