EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039233 (Gene tree)
Gene ID: 42963
Gene Symbol: CG7006
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 759 bases
Position: chr3R:24850627-24851385
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0084082	UPF0113	PF03657.13	4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0084704	-	708	-	FBpp0084082	180 (aa)	-	Q9VC28

Gene Model

Click here to download FBgn0039233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039233's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039233	CG7006	99	64.804	ENSG00000132603	NIP7	94	72.727	Homo_sapiens
FBgn0039233	CG7006	99	65.922	ENSAPOG00000005901	nip7	99	65.922	Acanthochromis_polyacanthus
FBgn0039233	CG7006	99	65.922	ENSAMEG00000007542	NIP7	99	65.922	Ailuropoda_melanoleuca
FBgn0039233	CG7006	99	65.922	ENSAOCG00000017498	nip7	99	65.922	Amphiprion_ocellaris
FBgn0039233	CG7006	99	65.922	ENSAPEG00000002824	nip7	99	65.922	Amphiprion_percula
FBgn0039233	CG7006	99	67.039	ENSATEG00000019165	nip7	99	67.039	Anabas_testudineus
FBgn0039233	CG7006	99	67.598	ENSACAG00000003476	NIP7	99	67.598	Anolis_carolinensis
FBgn0039233	CG7006	99	64.804	ENSANAG00000037006	NIP7	99	64.804	Aotus_nancymaae
FBgn0039233	CG7006	99	65.922	ENSACLG00000012368	nip7	99	65.922	Astatotilapia_calliptera
FBgn0039233	CG7006	99	67.598	ENSAMXG00000003634	nip7	99	54.749	Astyanax_mexicanus
FBgn0039233	CG7006	99	65.922	ENSBTAG00000001666	NIP7	99	65.922	Bos_taurus
FBgn0039233	CG7006	99	53.073	WBGene00016607	C43E11.9	99	53.073	Caenorhabditis_elegans
FBgn0039233	CG7006	99	64.804	ENSCJAG00000015364	NIP7	99	64.804	Callithrix_jacchus
FBgn0039233	CG7006	99	64.804	ENSCAFG00000029835	NIP7	94	64.804	Canis_familiaris
FBgn0039233	CG7006	99	66.480	ENSCHIG00000019332	-	99	66.480	Capra_hircus
FBgn0039233	CG7006	99	65.363	ENSTSYG00000032526	NIP7	99	65.363	Carlito_syrichta
FBgn0039233	CG7006	99	65.363	ENSCPOG00000003712	NIP7	99	65.363	Cavia_porcellus
FBgn0039233	CG7006	99	64.804	ENSCCAG00000023481	NIP7	99	64.804	Cebus_capucinus
FBgn0039233	CG7006	99	49.162	ENSCATG00000006216	-	79	49.162	Cercocebus_atys
FBgn0039233	CG7006	99	64.246	ENSCATG00000031010	NIP7	99	64.246	Cercocebus_atys
FBgn0039233	CG7006	99	64.246	ENSCLAG00000007579	NIP7	99	64.246	Chinchilla_lanigera
FBgn0039233	CG7006	99	46.927	ENSCSAG00000015707	-	99	46.927	Chlorocebus_sabaeus
FBgn0039233	CG7006	99	64.804	ENSCSAG00000004137	NIP7	99	64.804	Chlorocebus_sabaeus
FBgn0039233	CG7006	99	60.335	ENSCHOG00000010787	NIP7	99	60.335	Choloepus_hoffmanni
FBgn0039233	CG7006	99	66.480	ENSCPBG00000027051	NIP7	99	66.480	Chrysemys_picta_bellii
FBgn0039233	CG7006	99	63.128	ENSCING00000006610	-	99	63.128	Ciona_intestinalis
FBgn0039233	CG7006	99	63.128	ENSCSAVG00000009157	-	99	63.128	Ciona_savignyi
FBgn0039233	CG7006	99	64.246	ENSCANG00000029815	NIP7	99	64.246	Colobus_angolensis_palliatus
FBgn0039233	CG7006	98	53.107	ENSCGRG00001020027	-	95	53.107	Cricetulus_griseus_chok1gshd
FBgn0039233	CG7006	99	59.218	ENSCGRG00001010780	-	99	59.218	Cricetulus_griseus_chok1gshd
FBgn0039233	CG7006	99	65.363	ENSCGRG00001008966	-	99	65.363	Cricetulus_griseus_chok1gshd
FBgn0039233	CG7006	99	58.101	ENSCGRG00000000567	-	99	58.101	Cricetulus_griseus_crigri
FBgn0039233	CG7006	99	65.363	ENSCGRG00000001344	-	99	65.363	Cricetulus_griseus_crigri
FBgn0039233	CG7006	92	55.152	ENSCGRG00000007805	-	100	55.152	Cricetulus_griseus_crigri
FBgn0039233	CG7006	99	67.598	ENSCSEG00000011356	nip7	99	67.598	Cynoglossus_semilaevis
FBgn0039233	CG7006	99	65.922	ENSCVAG00000012170	nip7	99	65.922	Cyprinodon_variegatus
FBgn0039233	CG7006	99	68.715	ENSDARG00000059075	nip7	99	68.715	Danio_rerio
FBgn0039233	CG7006	99	66.480	ENSDNOG00000006821	NIP7	99	66.480	Dasypus_novemcinctus
FBgn0039233	CG7006	99	65.363	ENSDORG00000027163	Nip7	99	65.363	Dipodomys_ordii
FBgn0039233	CG7006	99	65.922	ENSETEG00000013549	NIP7	99	65.922	Echinops_telfairi
FBgn0039233	CG7006	99	64.246	ENSEBUG00000015270	nip7	99	64.246	Eptatretus_burgeri
FBgn0039233	CG7006	99	65.363	ENSEASG00005021312	NIP7	99	65.363	Equus_asinus_asinus
FBgn0039233	CG7006	99	65.363	ENSECAG00000036727	NIP7	99	65.363	Equus_caballus
FBgn0039233	CG7006	99	65.922	ENSEEUG00000008660	NIP7	99	65.922	Erinaceus_europaeus
FBgn0039233	CG7006	99	65.922	ENSFCAG00000013574	NIP7	99	65.922	Felis_catus
FBgn0039233	CG7006	89	65.000	ENSFALG00000002761	NIP7	99	65.000	Ficedula_albicollis
FBgn0039233	CG7006	99	65.922	ENSFDAG00000015970	NIP7	99	65.922	Fukomys_damarensis
FBgn0039233	CG7006	99	53.552	ENSFHEG00000008752	nip7	99	53.552	Fundulus_heteroclitus
FBgn0039233	CG7006	91	67.073	ENSGMOG00000005786	nip7	95	67.073	Gadus_morhua
FBgn0039233	CG7006	99	63.128	ENSGALG00000000650	NIP7	99	63.128	Gallus_gallus
FBgn0039233	CG7006	99	67.039	ENSGAFG00000009138	nip7	99	67.039	Gambusia_affinis
FBgn0039233	CG7006	99	66.480	ENSGACG00000016301	nip7	99	66.480	Gasterosteus_aculeatus
FBgn0039233	CG7006	82	69.388	ENSGAGG00000000314	NIP7	99	69.388	Gopherus_agassizii
FBgn0039233	CG7006	99	64.804	ENSGGOG00000022785	NIP7	99	64.804	Gorilla_gorilla
FBgn0039233	CG7006	99	53.073	ENSGGOG00000007747	-	99	53.073	Gorilla_gorilla
FBgn0039233	CG7006	99	65.922	ENSHBUG00000020049	nip7	99	65.922	Haplochromis_burtoni
FBgn0039233	CG7006	99	64.804	ENSHGLG00000017478	NIP7	99	64.804	Heterocephalus_glaber_female
FBgn0039233	CG7006	99	64.804	ENSHGLG00100005353	NIP7	99	64.804	Heterocephalus_glaber_male
FBgn0039233	CG7006	99	66.480	ENSHCOG00000018004	nip7	99	66.480	Hippocampus_comes
FBgn0039233	CG7006	99	67.039	ENSIPUG00000007516	nip7	99	67.039	Ictalurus_punctatus
FBgn0039233	CG7006	99	65.922	ENSSTOG00000012871	NIP7	99	65.922	Ictidomys_tridecemlineatus
FBgn0039233	CG7006	99	58.989	ENSJJAG00000017333	-	99	58.989	Jaculus_jaculus
FBgn0039233	CG7006	96	64.740	ENSJJAG00000018787	-	99	64.072	Jaculus_jaculus
FBgn0039233	CG7006	99	49.721	ENSJJAG00000001553	-	99	49.721	Jaculus_jaculus
FBgn0039233	CG7006	99	65.922	ENSKMAG00000018713	nip7	99	65.922	Kryptolebias_marmoratus
FBgn0039233	CG7006	99	65.922	ENSLBEG00000005274	nip7	99	65.922	Labrus_bergylta
FBgn0039233	CG7006	99	67.039	ENSLACG00000006594	NIP7	99	67.039	Latimeria_chalumnae
FBgn0039233	CG7006	99	67.039	ENSLOCG00000001379	nip7	99	67.039	Lepisosteus_oculatus
FBgn0039233	CG7006	99	64.804	ENSLAFG00000004830	NIP7	99	64.804	Loxodonta_africana
FBgn0039233	CG7006	99	59.777	ENSMFAG00000013965	-	99	59.777	Macaca_fascicularis
FBgn0039233	CG7006	84	53.947	ENSMFAG00000002077	-	100	53.947	Macaca_fascicularis
FBgn0039233	CG7006	99	64.246	ENSMFAG00000046374	NIP7	99	64.246	Macaca_fascicularis
FBgn0039233	CG7006	50	66.667	ENSMMUG00000016635	-	79	66.667	Macaca_mulatta
FBgn0039233	CG7006	99	50.279	ENSMMUG00000043208	-	79	50.279	Macaca_mulatta
FBgn0039233	CG7006	99	59.218	ENSMMUG00000046403	-	99	59.218	Macaca_mulatta
FBgn0039233	CG7006	99	64.246	ENSMNEG00000037905	NIP7	99	64.246	Macaca_nemestrina
FBgn0039233	CG7006	84	53.289	ENSMLEG00000030257	-	100	53.289	Mandrillus_leucophaeus
FBgn0039233	CG7006	99	64.246	ENSMLEG00000042389	NIP7	99	64.246	Mandrillus_leucophaeus
FBgn0039233	CG7006	86	59.740	ENSMLEG00000037105	-	84	59.740	Mandrillus_leucophaeus
FBgn0039233	CG7006	99	67.598	ENSMAMG00000020375	nip7	99	67.598	Mastacembelus_armatus
FBgn0039233	CG7006	99	65.922	ENSMZEG00005009767	nip7	99	65.922	Maylandia_zebra
FBgn0039233	CG7006	89	66.875	ENSMGAG00000008556	NIP7	99	66.875	Meleagris_gallopavo
FBgn0039233	CG7006	99	65.363	ENSMAUG00000019255	Nip7	99	65.363	Mesocricetus_auratus
FBgn0039233	CG7006	99	65.922	ENSMICG00000009664	NIP7	99	65.922	Microcebus_murinus
FBgn0039233	CG7006	99	65.363	ENSMOCG00000020110	Nip7	99	65.363	Microtus_ochrogaster
FBgn0039233	CG7006	99	63.128	ENSMMOG00000000657	nip7	99	63.128	Mola_mola
FBgn0039233	CG7006	100	67.222	ENSMODG00000002782	NIP7	100	67.222	Monodelphis_domestica
FBgn0039233	CG7006	99	67.039	ENSMALG00000008166	nip7	99	67.039	Monopterus_albus
FBgn0039233	CG7006	99	65.363	MGP_CAROLIEiJ_G0031530	Nip7	99	65.363	Mus_caroli
FBgn0039233	CG7006	99	65.363	ENSMUSG00000031917	Nip7	99	65.363	Mus_musculus
FBgn0039233	CG7006	99	64.804	MGP_PahariEiJ_G0023130	Nip7	99	64.804	Mus_pahari
FBgn0039233	CG7006	99	65.363	MGP_SPRETEiJ_G0032648	Nip7	99	65.363	Mus_spretus
FBgn0039233	CG7006	99	65.922	ENSMLUG00000011835	NIP7	99	65.922	Myotis_lucifugus
FBgn0039233	CG7006	99	64.804	ENSNGAG00000006098	Nip7	99	64.804	Nannospalax_galili
FBgn0039233	CG7006	98	51.977	ENSNGAG00000012129	-	90	51.977	Nannospalax_galili
FBgn0039233	CG7006	99	65.922	ENSNBRG00000001950	nip7	99	65.922	Neolamprologus_brichardi
FBgn0039233	CG7006	99	63.128	ENSNLEG00000005492	NIP7	99	63.128	Nomascus_leucogenys
FBgn0039233	CG7006	100	64.444	ENSMEUG00000002818	NIP7	100	64.444	Notamacropus_eugenii
FBgn0039233	CG7006	99	64.804	ENSOPRG00000006981	NIP7	99	64.804	Ochotona_princeps
FBgn0039233	CG7006	99	64.246	ENSODEG00000014849	-	99	64.246	Octodon_degus
FBgn0039233	CG7006	99	57.542	ENSODEG00000000559	-	99	57.542	Octodon_degus
FBgn0039233	CG7006	99	65.922	ENSONIG00000017181	nip7	99	65.922	Oreochromis_niloticus
FBgn0039233	CG7006	99	65.363	ENSOCUG00000017652	NIP7	99	65.363	Oryctolagus_cuniculus
FBgn0039233	CG7006	99	66.480	ENSORLG00000011734	nip7	99	66.480	Oryzias_latipes
FBgn0039233	CG7006	99	66.480	ENSORLG00020002338	nip7	99	66.480	Oryzias_latipes_hni
FBgn0039233	CG7006	99	66.480	ENSORLG00015001005	nip7	99	66.480	Oryzias_latipes_hsok
FBgn0039233	CG7006	99	66.480	ENSOMEG00000011688	nip7	99	66.480	Oryzias_melastigma
FBgn0039233	CG7006	99	64.804	ENSOGAG00000008066	NIP7	99	64.804	Otolemur_garnettii
FBgn0039233	CG7006	99	66.480	ENSOARG00000003558	NIP7	99	66.480	Ovis_aries
FBgn0039233	CG7006	99	64.804	ENSPPAG00000000218	NIP7	99	64.804	Pan_paniscus
FBgn0039233	CG7006	99	53.631	ENSPPAG00000006091	-	99	53.631	Pan_paniscus
FBgn0039233	CG7006	99	65.922	ENSPPRG00000009719	NIP7	99	65.922	Panthera_pardus
FBgn0039233	CG7006	99	65.922	ENSPTIG00000010113	NIP7	99	65.922	Panthera_tigris_altaica
FBgn0039233	CG7006	99	64.804	ENSPTRG00000051089	NIP7	99	64.804	Pan_troglodytes
FBgn0039233	CG7006	99	53.631	ENSPTRG00000051330	-	99	53.631	Pan_troglodytes
FBgn0039233	CG7006	99	46.927	ENSPANG00000035982	-	99	46.927	Papio_anubis
FBgn0039233	CG7006	99	49.162	ENSPANG00000029979	-	79	49.162	Papio_anubis
FBgn0039233	CG7006	99	64.246	ENSPANG00000033665	-	99	64.246	Papio_anubis
FBgn0039233	CG7006	99	68.715	ENSPKIG00000020345	nip7	76	68.715	Paramormyrops_kingsleyae
FBgn0039233	CG7006	90	69.136	ENSPSIG00000011210	NIP7	99	69.136	Pelodiscus_sinensis
FBgn0039233	CG7006	99	65.363	ENSPEMG00000011304	Nip7	99	65.363	Peromyscus_maniculatus_bairdii
FBgn0039233	CG7006	100	67.222	ENSPCIG00000012768	NIP7	100	67.222	Phascolarctos_cinereus
FBgn0039233	CG7006	99	67.039	ENSPFOG00000014985	nip7	99	67.039	Poecilia_formosa
FBgn0039233	CG7006	99	67.039	ENSPLAG00000005031	nip7	99	67.039	Poecilia_latipinna
FBgn0039233	CG7006	99	67.039	ENSPMEG00000008213	nip7	99	67.039	Poecilia_mexicana
FBgn0039233	CG7006	99	64.804	ENSPPYG00000007503	NIP7	99	64.804	Pongo_abelii
FBgn0039233	CG7006	99	65.363	ENSPCOG00000011060	NIP7	99	65.363	Propithecus_coquereli
FBgn0039233	CG7006	99	65.363	ENSPVAG00000015980	NIP7	99	65.363	Pteropus_vampyrus
FBgn0039233	CG7006	99	65.922	ENSPNYG00000018316	nip7	99	65.922	Pundamilia_nyererei
FBgn0039233	CG7006	99	68.715	ENSPNAG00000027680	nip7	99	56.425	Pygocentrus_nattereri
FBgn0039233	CG7006	99	65.363	ENSRNOG00000020391	Nip7	99	65.363	Rattus_norvegicus
FBgn0039233	CG7006	97	51.685	ENSRBIG00000033803	-	100	51.685	Rhinopithecus_bieti
FBgn0039233	CG7006	95	61.988	ENSRBIG00000039934	-	100	61.988	Rhinopithecus_bieti
FBgn0039233	CG7006	99	45.810	ENSRROG00000044739	-	78	45.810	Rhinopithecus_roxellana
FBgn0039233	CG7006	99	64.804	ENSRROG00000026840	NIP7	99	64.804	Rhinopithecus_roxellana
FBgn0039233	CG7006	100	46.667	YPL211W	-	99	46.667	Saccharomyces_cerevisiae
FBgn0039233	CG7006	99	64.804	ENSSBOG00000027548	NIP7	99	64.804	Saimiri_boliviensis_boliviensis
FBgn0039233	CG7006	99	68.156	ENSSFOG00015008579	nip7	99	68.156	Scleropages_formosus
FBgn0039233	CG7006	99	67.598	ENSSMAG00000006217	nip7	99	67.598	Scophthalmus_maximus
FBgn0039233	CG7006	99	68.156	ENSSDUG00000002698	nip7	99	68.156	Seriola_dumerili
FBgn0039233	CG7006	99	68.156	ENSSLDG00000005153	nip7	99	68.156	Seriola_lalandi_dorsalis
FBgn0039233	CG7006	99	64.804	ENSSARG00000000303	NIP7	99	64.804	Sorex_araneus
FBgn0039233	CG7006	99	65.922	ENSSPUG00000005858	NIP7	99	65.922	Sphenodon_punctatus
FBgn0039233	CG7006	99	65.363	ENSSPAG00000017699	nip7	99	65.363	Stegastes_partitus
FBgn0039233	CG7006	99	65.363	ENSSSCG00000033741	NIP7	99	65.363	Sus_scrofa
FBgn0039233	CG7006	99	59.777	ENSTGUG00000008073	NIP7	99	59.777	Taeniopygia_guttata
FBgn0039233	CG7006	99	65.922	ENSTRUG00000020267	nip7	99	65.922	Takifugu_rubripes
FBgn0039233	CG7006	99	67.039	ENSTNIG00000004660	nip7	99	67.039	Tetraodon_nigroviridis
FBgn0039233	CG7006	99	65.922	ENSTTRG00000010012	NIP7	99	65.922	Tursiops_truncatus
FBgn0039233	CG7006	99	65.922	ENSUAMG00000022688	NIP7	99	65.922	Ursus_americanus
FBgn0039233	CG7006	99	65.922	ENSUMAG00000018771	NIP7	99	65.922	Ursus_maritimus
FBgn0039233	CG7006	99	65.922	ENSVPAG00000003991	NIP7	99	65.922	Vicugna_pacos
FBgn0039233	CG7006	99	64.804	ENSVVUG00000017160	-	99	64.804	Vulpes_vulpes
FBgn0039233	CG7006	99	57.222	ENSVVUG00000008406	-	99	57.222	Vulpes_vulpes
FBgn0039233	CG7006	99	69.274	ENSXETG00000017853	nip7	99	69.274	Xenopus_tropicalis
FBgn0039233	CG7006	99	67.039	ENSXMAG00000025276	nip7	99	67.039	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component
GO:0042255	ribosome assembly	-	IEA	Process
GO:0042273	ribosomal large subunit biogenesis	21873635.	IBA	Process