EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039251 (Gene tree)
Gene ID: 42983
Gene Symbol: Trf4-2
Alias: -
Full Name: Topoisomerase related function 4-2
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1870 bases
Position: chr3R:24925216-24927085
Accession: FBgn0039251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0084094	PAP_assoc	PF03828.19	4.1e-14	1	1
FBpp0307940	PAP_assoc	PF03828.19	4.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0337011	-	1429	-	FBpp0307940	407 (aa)	-	Q9VC07
FBtr0084718	-	1870	-	FBpp0084094	407 (aa)	-	Q9VC07

Gene Model

Click here to download FBgn0039251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039251	Trf4-2	80	41.896	ENSCING00000012738	-	81	41.896	Ciona_intestinalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003887	DNA-directed DNA polymerase activity	11579108.	NAS	Function
GO:0004652	polynucleotide adenylyltransferase activity	21873635.	IBA	Function
GO:0004652	polynucleotide adenylyltransferase activity	-	ISS	Function
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISS	Component
GO:0007062	sister chromatid cohesion	11579108.	NAS	Process
GO:0031499	TRAMP complex	21873635.	IBA	Component
GO:0071044	histone mRNA catabolic process	21873635.	IBA	Process
GO:0071046	nuclear polyadenylation-dependent ncRNA catabolic process	-	ISS	Process
GO:0071050	snoRNA polyadenylation	21873635.	IBA	Process