EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Gene Ontology
Description
Ensembl ID
FBgn0039261 (Gene tree)
Gene ID
42995
Gene Symbol
CG6422
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Minus strand
Length
5374 bases
Position
chr3R:25033876-25039249
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0112193YTHPF04146.157.2e-4211
FBpp0084170YTHPF04146.157.3e-4211
FBpp0084169YTHPF04146.157.3e-4211
FBpp0306574YTHPF04146.157.3e-4211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
27197210The mRNA-bound proteome of the early fly embryoIC & embryos2016 Apr 28Wessels HHDOI: 10.1101/gr.200386.115
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0084795-2832-FBpp0084170699 (aa)-Q8IGP2
FBtr0084794-2965-FBpp0084169700 (aa)-Q9VBZ5
FBtr0113281-2616-FBpp0112193694 (aa)-A8JRA4
FBtr0334507-2862-FBpp0306574700 (aa)-A8JRA4
Gene Model
Click here to download FBgn0039261's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0039261's network
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005737cytoplasm27919077.27919081.IDAComponent
GO:0036002pre-mRNA binding28675155.IDAFunction
GO:1990247N6-methyladenosine-containing RNA binding28675155.IDAFunction

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