EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039338 (Gene tree)
Gene ID: 43080
Gene Symbol: XNP
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 4967 bases
Position: chr3R:25477868-25482834
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0311051	ResIII	PF04851.15	6.6e-06	1	1
FBpp0311052	ResIII	PF04851.15	6.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0344718	-	4493	-	FBpp0311051	1046 (aa)	-	A0A0B4LHR3
FBtr0344719	-	4557	-	FBpp0311052	1046 (aa)	-	A0A0B4LHR3
FBtr0084838	-	4557	-	FBpp0084213	1311 (aa)	-	Q9GQN5
FBtr0084837	-	4493	-	FBpp0084212	1311 (aa)	-	Q9GQN5

Gene Model

Click here to download FBgn0039338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0039338	XNP	51	34.328	FBgn0002989	okr	60	34.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039338	XNP	68	45.856	ENSCANG00000031935	ATRX	85	43.902	Colobus_angolensis_palliatus
FBgn0039338	XNP	68	47.439	ENSGGOG00000024999	ATRX	85	45.146	Gorilla_gorilla
FBgn0039338	XNP	68	47.439	ENSMFAG00000031719	ATRX	85	45.263	Macaca_fascicularis
FBgn0039338	XNP	68	47.439	ENSMNEG00000033171	ATRX	85	45.263	Macaca_nemestrina
FBgn0039338	XNP	68	47.439	ENSMLEG00000036012	ATRX	85	45.146	Mandrillus_leucophaeus
FBgn0039338	XNP	85	40.498	ENSNBRG00000016297	-	50	44.710	Neolamprologus_brichardi
FBgn0039338	XNP	68	47.439	ENSNLEG00000001144	ATRX	85	45.093	Nomascus_leucogenys
FBgn0039338	XNP	69	47.193	ENSPPAG00000043806	ATRX	85	44.948	Pan_paniscus
FBgn0039338	XNP	69	47.193	ENSPTRG00000022047	ATRX	85	44.948	Pan_troglodytes
FBgn0039338	XNP	68	47.439	ENSPANG00000024984	ATRX	85	45.263	Papio_anubis
FBgn0039338	XNP	69	47.878	ENSPEMG00000022358	-	79	47.117	Peromyscus_maniculatus_bairdii

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000775	chromosome, centromeric region	18461125.	IDA	Component
GO:0000792	heterochromatin	27514026.	IDA	Component
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	23408912.	IDA	Component
GO:0005700	polytene chromosome	18461125.22021382.	IDA	Component
GO:0005722	beta-heterochromatin	20154359.	IDA	Component
GO:0006336	DNA replication-independent nucleosome assembly	23150573.	IMP	Process
GO:0007399	nervous system development	17376868.	IMP	Process
GO:0007411	axon guidance	16648585.	IMP	Process
GO:0008347	glial cell migration	16648585.	IMP	Process
GO:0016887	ATPase activity	20154359.	IDA	Function
GO:0042585	germinal vesicle	23408912.	IDA	Component
GO:0046328	regulation of JNK cascade	17531976.	IGI	Process
GO:0051276	chromosome organization	18461125.	IMP	Process
GO:0070868	heterochromatin organization involved in chromatin silencing	20154359.	IMP	Process
GO:0097193	intrinsic apoptotic signaling pathway	17531976.	IMP	Process