EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0039385 (Gene tree)
Gene ID
43132
Gene Symbol
CG5913
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Plus strand
Length
1532 bases
Position
chr3R:25893495-25895026
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0084312DUF2465PF10239.91.5e-11311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
27197210The mRNA-bound proteome of the early fly embryoIC & embryos2016 Apr 28Wessels HHDOI: 10.1101/gr.200386.115
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0084938-1532-FBpp0084312454 (aa)-Q960C1
Gene Model
Click here to download FBgn0039385's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0039385's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0039385CG59137336.012ENSG00000119812FAM98A9532.573Homo_sapiens
FBgn0039385CG59137133.333ENSG00000171262FAM98B7333.333Homo_sapiens
FBgn0039385CG59137231.804ENSAPOG00000011449fam98b8331.193Acanthochromis_polyacanthus
FBgn0039385CG59137030.030ENSAMEG00000010326FAM98C8830.124Ailuropoda_melanoleuca
FBgn0039385CG59137232.622ENSACIG00000015069fam98b8132.622Amphilophus_citrinellus
FBgn0039385CG59137231.498ENSAOCG00000018313fam98b8231.595Amphiprion_ocellaris
FBgn0039385CG59137136.503ENSAOCG00000007727fam98a7632.250Amphiprion_ocellaris
FBgn0039385CG59137231.498ENSAPEG00000016398fam98b8231.595Amphiprion_percula
FBgn0039385CG59137231.804ENSATEG00000011057fam98b8431.804Anabas_testudineus
FBgn0039385CG59137036.196ENSAPLG00000012120-8431.190Anas_platyrhynchos
FBgn0039385CG59137532.759ENSAPLG00000006881FAM98B8632.849Anas_platyrhynchos
FBgn0039385CG59137232.440ENSACAG00000015917FAM98B7732.537Anolis_carolinensis
FBgn0039385CG59136833.546ENSACAG00000002418FAM98C8733.546Anolis_carolinensis
FBgn0039385CG59137132.110ENSANAG00000024679-7433.535Aotus_nancymaae
FBgn0039385CG59137336.012ENSANAG00000037168FAM98A6235.736Aotus_nancymaae
FBgn0039385CG59137232.121ENSACLG00000013626fam98b8131.498Astatotilapia_calliptera
FBgn0039385CG59137335.988ENSAMXG00000005134fam98a5835.435Astyanax_mexicanus
FBgn0039385CG59137335.882ENSBTAG00000008548FAM98A6235.693Bos_taurus
FBgn0039385CG59137133.639ENSBTAG00000021870FAM98B7532.931Bos_taurus
FBgn0039385CG59137132.110ENSCJAG00000020980FAM98B7433.535Callithrix_jacchus
FBgn0039385CG59137336.012ENSCJAG00000044986FAM98A6235.736Callithrix_jacchus
FBgn0039385CG59136831.190ENSCAFG00000008649FAM98B9631.111Canis_familiaris
FBgn0039385CG59137330.058ENSCAFG00000005919FAM98C7830.240Canis_familiaris
FBgn0039385CG59137335.714ENSCAFG00020023008FAM98A9431.788Canis_lupus_dingo
FBgn0039385CG59137330.347ENSCAFG00020017778FAM98C9030.539Canis_lupus_dingo
FBgn0039385CG59137133.639ENSCAFG00020006138FAM98B7532.931Canis_lupus_dingo
FBgn0039385CG59137335.882ENSCHIG00000026285-6335.693Capra_hircus
FBgn0039385CG59137133.333ENSCHIG00000016469FAM98B7532.628Capra_hircus
FBgn0039385CG59137236.061ENSTSYG00000034922FAM98A7034.054Carlito_syrichta
FBgn0039385CG59137133.333ENSTSYG00000001553FAM98B7633.434Carlito_syrichta
FBgn0039385CG59135933.209ENSCAPG00000013902FAM98A5332.824Cavia_aperea
FBgn0039385CG59137134.251ENSCPOG00000027558FAM98B7533.939Cavia_porcellus
FBgn0039385CG59137236.145ENSCPOG00000002065FAM98A8333.333Cavia_porcellus
FBgn0039385CG59137132.110ENSCCAG00000037688FAM98B7533.636Cebus_capucinus
FBgn0039385CG59137335.714ENSCCAG00000018031FAM98A6235.435Cebus_capucinus
FBgn0039385CG59137335.714ENSCATG00000034478FAM98A6235.435Cercocebus_atys
FBgn0039385CG59137236.145ENSCLAG00000004259FAM98A6235.736Chinchilla_lanigera
FBgn0039385CG59136530.303ENSCSAG00000007238FAM98B8630.303Chlorocebus_sabaeus
FBgn0039385CG59137435.103ENSCPBG00000025148FAM98A5934.337Chrysemys_picta_bellii
FBgn0039385CG59137134.451ENSCPBG00000000742FAM98B9531.457Chrysemys_picta_bellii
FBgn0039385CG59139430.607ENSCING00000022149-7631.288Ciona_intestinalis
FBgn0039385CG59136430.612ENSCANG00000030536-9630.479Colobus_angolensis_palliatus
FBgn0039385CG59137933.978ENSCANG00000038477FAM98B8233.028Colobus_angolensis_palliatus
FBgn0039385CG59137135.061ENSCGRG00001011148Fam98b8734.743Cricetulus_griseus_chok1gshd
FBgn0039385CG59136531.475ENSCVAG00000022569fam98a9731.803Cyprinodon_variegatus
FBgn0039385CG59137230.887ENSCVAG00000003248fam98b8430.887Cyprinodon_variegatus
FBgn0039385CG59137136.391ENSDARG00000078391fam98a6835.829Danio_rerio
FBgn0039385CG59137134.557ENSDNOG00000034055-7533.735Dasypus_novemcinctus
FBgn0039385CG59138032.468ENSEBUG00000004040fam98a7433.435Eptatretus_burgeri
FBgn0039385CG59137134.251ENSEASG00005016717FAM98B7433.535Equus_asinus_asinus
FBgn0039385CG59137336.012ENSEASG00005007725FAM98A6235.736Equus_asinus_asinus
FBgn0039385CG59137335.714ENSECAG00000021595FAM98A6635.435Equus_caballus
FBgn0039385CG59137134.251ENSECAG00000006704FAM98B7433.535Equus_caballus
FBgn0039385CG59137233.841ENSELUG00000006690fam98b8433.841Esox_lucius
FBgn0039385CG59137232.523ENSELUG00000013165fam98a8331.567Esox_lucius
FBgn0039385CG59137335.714ENSFCAG00000024944FAM98A9431.788Felis_catus
FBgn0039385CG59137133.435ENSFCAG00000041077FAM98B7333.233Felis_catus
FBgn0039385CG59137330.925ENSFCAG00000000826FAM98C8930.746Felis_catus
FBgn0039385CG59136931.975ENSFALG00000005610FAM98B9231.464Ficedula_albicollis
FBgn0039385CG59137133.739ENSFDAG00000017475FAM98B8133.634Fukomys_damarensis
FBgn0039385CG59137335.119ENSFDAG00000001557FAM98A7632.634Fukomys_damarensis
FBgn0039385CG59137230.368ENSFHEG00000020445fam98b8330.368Fundulus_heteroclitus
FBgn0039385CG59138134.771ENSGMOG00000015240fam98a6933.540Gadus_morhua
FBgn0039385CG59137435.693ENSGALG00000010428FAM98A5934.743Gallus_gallus
FBgn0039385CG59137932.425ENSGALG00000009744FAM98B7733.523Gallus_gallus
FBgn0039385CG59136532.226ENSGAFG00000010018fam98a9132.226Gambusia_affinis
FBgn0039385CG59137231.611ENSGAFG00000019645fam98b8430.982Gambusia_affinis
FBgn0039385CG59137133.945ENSGACG00000002316fam98a9431.081Gasterosteus_aculeatus
FBgn0039385CG59137434.808ENSGAGG00000001428FAM98A5934.036Gopherus_agassizii
FBgn0039385CG59137134.347ENSGAGG00000003971FAM98B8134.043Gopherus_agassizii
FBgn0039385CG59137233.535ENSGAGG00000016487FAM98C9133.548Gopherus_agassizii
FBgn0039385CG59137830.000ENSGGOG00000026320-8730.284Gorilla_gorilla
FBgn0039385CG59137232.121ENSHBUG00000017779fam98b8131.498Haplochromis_burtoni
FBgn0039385CG59137132.722ENSHGLG00000012275FAM98B7632.523Heterocephalus_glaber_female
FBgn0039385CG59135330.738ENSHGLG00000017979-5731.174Heterocephalus_glaber_female
FBgn0039385CG59137132.722ENSHGLG00100000123FAM98B7632.523Heterocephalus_glaber_male
FBgn0039385CG59135330.738ENSHGLG00100005888-5731.174Heterocephalus_glaber_male
FBgn0039385CG59137231.611ENSIPUG00000006869fam98b7931.915Ictalurus_punctatus
FBgn0039385CG59137133.435ENSSTOG00000005841FAM98B7733.333Ictidomys_tridecemlineatus
FBgn0039385CG59137134.557ENSJJAG00000009039Fam98b8834.441Jaculus_jaculus
FBgn0039385CG59136836.741ENSJJAG00000012732Fam98a5936.774Jaculus_jaculus
FBgn0039385CG59137135.045ENSKMAG00000013971fam98a6135.952Kryptolebias_marmoratus
FBgn0039385CG59137230.723ENSKMAG00000011017fam98b8430.982Kryptolebias_marmoratus
FBgn0039385CG59137235.241ENSLBEG00000025346fam98a6335.030Labrus_bergylta
FBgn0039385CG59137232.024ENSLACG00000010997FAM98B8332.024Latimeria_chalumnae
FBgn0039385CG59137233.131ENSLOCG00000012257fam98b8733.131Lepisosteus_oculatus
FBgn0039385CG59137235.329ENSLOCG00000016699fam98a6135.135Lepisosteus_oculatus
FBgn0039385CG59137335.714ENSLAFG00000029787FAM98A6235.152Loxodonta_africana
FBgn0039385CG59137934.865ENSLAFG00000008165FAM98B9332.000Loxodonta_africana
FBgn0039385CG59136530.303ENSMFAG00000016144FAM98B9531.604Macaca_fascicularis
FBgn0039385CG59137335.714ENSMFAG00000031093FAM98A6235.435Macaca_fascicularis
FBgn0039385CG59136530.303ENSMMUG00000018332FAM98B9230.303Macaca_mulatta
FBgn0039385CG59137335.714ENSMMUG00000010462FAM98A6235.435Macaca_mulatta
FBgn0039385CG59137335.714ENSMNEG00000034154FAM98A6235.435Macaca_nemestrina
FBgn0039385CG59137335.714ENSMLEG00000032867FAM98A6235.435Mandrillus_leucophaeus
FBgn0039385CG59136530.303ENSMLEG00000006220FAM98B8630.303Mandrillus_leucophaeus
FBgn0039385CG59137231.498ENSMAMG00000005919fam98b8331.595Mastacembelus_armatus
FBgn0039385CG59137134.154ENSMAMG00000007238fam98a6134.627Mastacembelus_armatus
FBgn0039385CG59137232.121ENSMZEG00005002623fam98b8131.498Maylandia_zebra
FBgn0039385CG59137635.511ENSMGAG00000011063FAM98A6534.582Meleagris_gallopavo
FBgn0039385CG59137135.061ENSMAUG00000021144Fam98b7534.743Mesocricetus_auratus
FBgn0039385CG59137334.627ENSMAUG00000000836Fam98a6234.337Mesocricetus_auratus
FBgn0039385CG59137133.739ENSMICG00000017343FAM98B9030.435Microcebus_murinus
FBgn0039385CG59137336.012ENSMICG00000043251-6235.736Microcebus_murinus
FBgn0039385CG59136632.237ENSMICG00000034786-8732.119Microcebus_murinus
FBgn0039385CG59137134.251ENSMOCG00000019785Fam98b7734.043Microtus_ochrogaster
FBgn0039385CG59135837.023ENSMMOG00000007979fam98a5637.405Mola_mola
FBgn0039385CG59137133.333ENSMODG00000001159FAM98B9333.234Monodelphis_domestica
FBgn0039385CG59137935.356ENSMODG00000015429FAM98A6034.848Monodelphis_domestica
FBgn0039385CG59137134.251MGP_CAROLIEiJ_G0024110Fam98b7433.433Mus_caroli
FBgn0039385CG59137335.714MGP_CAROLIEiJ_G0021883Fam98a6235.152Mus_caroli
FBgn0039385CG59137134.251ENSMUSG00000027349Fam98b7433.433Mus_musculus
FBgn0039385CG59137335.224ENSMUSG00000002017Fam98a9432.107Mus_musculus
FBgn0039385CG59137334.627MGP_PahariEiJ_G0020870Fam98a6234.337Mus_pahari
FBgn0039385CG59137134.557MGP_PahariEiJ_G0025553Fam98b7433.731Mus_pahari
FBgn0039385CG59137834.444MGP_SPRETEiJ_G0025026Fam98b8034.242Mus_spretus
FBgn0039385CG59137335.224MGP_SPRETEiJ_G0022795Fam98a6234.940Mus_spretus
FBgn0039385CG59136630.132ENSMPUG00000008259FAM98B8730.132Mustela_putorius_furo
FBgn0039385CG59136830.769ENSMPUG00000017827FAM98C8830.341Mustela_putorius_furo
FBgn0039385CG59137131.193ENSMLUG00000009616FAM98B8030.514Myotis_lucifugus
FBgn0039385CG59137133.333ENSNGAG00000009974Fam98b7733.133Nannospalax_galili
FBgn0039385CG59137031.861ENSNBRG00000023631fam98b7731.962Neolamprologus_brichardi
FBgn0039385CG59137133.333ENSNLEG00000011389FAM98B7533.535Nomascus_leucogenys
FBgn0039385CG59137336.012ENSNLEG00000016012FAM98A9032.573Nomascus_leucogenys
FBgn0039385CG59137335.905ENSOPRG00000002336FAM98A6235.629Ochotona_princeps
FBgn0039385CG59137732.768ENSODEG00000017000-8333.535Octodon_degus
FBgn0039385CG59137434.718ENSODEG00000000195-6134.043Octodon_degus
FBgn0039385CG59137331.928ENSODEG00000007935-5432.012Octodon_degus
FBgn0039385CG59137133.639ENSODEG00000009619-7333.939Octodon_degus
FBgn0039385CG59137231.818ENSONIG00000001415fam98b7931.707Oreochromis_niloticus
FBgn0039385CG59135636.719ENSOANG00000012516FAM98A5536.032Ornithorhynchus_anatinus
FBgn0039385CG59136932.087ENSOCUG00000001786FAM98B7732.000Oryctolagus_cuniculus
FBgn0039385CG59137233.436ENSORLG00000012990fam98b8733.436Oryzias_latipes
FBgn0039385CG59137234.663ENSORLG00020017980fam98b8734.049Oryzias_latipes_hni
FBgn0039385CG59136431.879ENSOMEG00000001966fam98a5431.879Oryzias_melastigma
FBgn0039385CG59137133.030ENSOGAG00000002801FAM98B7632.733Otolemur_garnettii
FBgn0039385CG59136933.125ENSOARG00000020035FAM98B7832.399Ovis_aries
FBgn0039385CG59137335.882ENSOARG00000010294FAM98A6235.693Ovis_aries
FBgn0039385CG59136530.100ENSPPRG00000008882FAM98B9330.100Panthera_pardus
FBgn0039385CG59137330.659ENSPPRG00000010257FAM98C9030.861Panthera_pardus
FBgn0039385CG59137335.714ENSPPRG00000002838FAM98A9431.788Panthera_pardus
FBgn0039385CG59137133.435ENSPTIG00000015746FAM98B9330.100Panthera_tigris_altaica
FBgn0039385CG59137335.714ENSPTIG00000008201FAM98A9431.788Panthera_tigris_altaica
FBgn0039385CG59137133.333ENSPTRG00000006904FAM98B9432.987Pan_troglodytes
FBgn0039385CG59137335.714ENSPANG00000022227FAM98A6235.435Papio_anubis
FBgn0039385CG59136530.303ENSPANG00000019500FAM98B9230.303Papio_anubis
FBgn0039385CG59136135.018ENSPKIG00000022087FAM98B7835.019Paramormyrops_kingsleyae
FBgn0039385CG59137136.280ENSPKIG00000009038fam98a6435.258Paramormyrops_kingsleyae
FBgn0039385CG59136036.101ENSPSIG00000006551FAM98B9136.823Pelodiscus_sinensis
FBgn0039385CG59137434.808ENSPSIG00000009481FAM98A6134.337Pelodiscus_sinensis
FBgn0039385CG59136530.303ENSPMGG00000016693fam98a9531.650Periophthalmus_magnuspinnatus
FBgn0039385CG59136830.599ENSPEMG00000007742-6332.647Peromyscus_maniculatus_bairdii
FBgn0039385CG59137134.451ENSPEMG00000013365Fam98b7434.337Peromyscus_maniculatus_bairdii
FBgn0039385CG59137334.524ENSPEMG00000022251-6234.036Peromyscus_maniculatus_bairdii
FBgn0039385CG59136833.229ENSPMAG00000002346fam98a9631.715Petromyzon_marinus
FBgn0039385CG59137133.131ENSPCIG00000017154FAM98B6732.831Phascolarctos_cinereus
FBgn0039385CG59137230.275ENSPFOG00000014774fam98b8330.793Poecilia_formosa
FBgn0039385CG59137230.275ENSPLAG00000020372fam98b8430.275Poecilia_latipinna
FBgn0039385CG59137230.581ENSPMEG00000010960fam98b8330.581Poecilia_mexicana
FBgn0039385CG59136536.721ENSPREG00000017792fam98a6137.459Poecilia_reticulata
FBgn0039385CG59137230.631ENSPREG00000007461fam98b8130.255Poecilia_reticulata
FBgn0039385CG59137132.722ENSPPYG00000006336FAM98B7432.931Pongo_abelii
FBgn0039385CG59135144.882ENSPCAG00000007906FAM98B5843.056Procavia_capensis
FBgn0039385CG59137335.714ENSPCOG00000021155FAM98A9532.248Propithecus_coquereli
FBgn0039385CG59137232.110ENSPNYG00000016866fam98b7832.110Pundamilia_nyererei
FBgn0039385CG59137236.310ENSPNAG00000011154fam98a6036.873Pygocentrus_nattereri
FBgn0039385CG59137335.714ENSRBIG00000044547FAM98A6235.435Rhinopithecus_bieti
FBgn0039385CG59137335.714ENSRROG00000037842FAM98A6235.435Rhinopithecus_roxellana
FBgn0039385CG59137332.635ENSSBOG00000025052-6232.132Saimiri_boliviensis_boliviensis
FBgn0039385CG59137732.955ENSSBOG00000011037FAM98B8233.528Saimiri_boliviensis_boliviensis
FBgn0039385CG59137336.012ENSSBOG00000034748-9332.573Saimiri_boliviensis_boliviensis
FBgn0039385CG59137133.435ENSSHAG00000018457FAM98B8630.333Sarcophilus_harrisii
FBgn0039385CG59136533.775ENSSFOG00015019413fam98a9232.890Scleropages_formosus
FBgn0039385CG59137531.014ENSSFOG00015010673fam98b8830.982Scleropages_formosus
FBgn0039385CG59137232.110ENSSMAG00000018911fam98b8631.902Scophthalmus_maximus
FBgn0039385CG59137631.700ENSSDUG00000015289fam98b9631.700Seriola_dumerili
FBgn0039385CG59137231.193ENSSLDG00000007822fam98b8331.193Seriola_lalandi_dorsalis
FBgn0039385CG59136133.571ENSSARG00000003483FAM98A8133.788Sorex_araneus
FBgn0039385CG59137433.819ENSSPUG00000019102FAM98B8930.592Sphenodon_punctatus
FBgn0039385CG59137233.434ENSSPUG00000012028FAM98A5933.533Sphenodon_punctatus
FBgn0039385CG59138035.230ENSSPAG00000015480fam98b9235.829Stegastes_partitus
FBgn0039385CG59137336.310ENSSSCG00000008508FAM98A6236.036Sus_scrofa
FBgn0039385CG59137133.945ENSSSCG00000004792FAM98B7433.233Sus_scrofa
FBgn0039385CG59138434.115ENSTNIG00000005464fam98a8933.504Tetraodon_nigroviridis
FBgn0039385CG59137630.899ENSTNIG00000017243fam98b8931.157Tetraodon_nigroviridis
FBgn0039385CG59137132.012ENSTTRG00000012175FAM98B7632.024Tursiops_truncatus
FBgn0039385CG59137030.539ENSUAMG00000014001FAM98C8830.124Ursus_americanus
FBgn0039385CG59136930.159ENSUMAG00000014766FAM98B6930.033Ursus_maritimus
FBgn0039385CG59137335.714ENSUMAG00000015450-6635.435Ursus_maritimus
FBgn0039385CG59137133.945ENSVPAG00000006604FAM98B9332.227Vicugna_pacos
FBgn0039385CG59137133.639ENSVVUG00000026383FAM98B8133.133Vulpes_vulpes
FBgn0039385CG59137933.158ENSXETG00000018061fam98b8634.954Xenopus_tropicalis
FBgn0039385CG59137031.173ENSXETG00000002820fam98a8031.173Xenopus_tropicalis
FBgn0039385CG59137634.286ENSXETG00000019357FAM98A6434.441Xenopus_tropicalis
FBgn0039385CG59137135.952ENSXCOG00000002273fam98a6336.391Xiphophorus_couchianus
FBgn0039385CG59137230.887ENSXMAG00000010344fam98b8130.887Xiphophorus_maculatus
FBgn0039385CG59137135.650ENSXMAG00000016010fam98a6336.095Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding-ISSFunction
GO:0005634nucleus-ISSComponent
GO:0005737cytoplasm-ISSComponent
GO:0008150biological_process-NDProcess
GO:0072669tRNA-splicing ligase complex21873635.IBAComponent

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