EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039406 (Gene tree)
Gene ID: 43169
Gene Symbol: RpL34a
Alias: -
Full Name: Ribosomal protein L34a
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 848 bases
Position: chr3R:26058420-26059267
Accession: FBgn0039406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0084345	Ribosomal_L34e	PF01199.18	2.8e-42	1	1
FBpp0084346	Ribosomal_L34e	PF01199.18	2.8e-42	1	1
FBpp0291564	Ribosomal_L34e	PF01199.18	2.8e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0302369	-	603	-	FBpp0291564	162 (aa)	-	Q8SYG0
FBtr0084973	-	621	-	FBpp0084346	162 (aa)	-	Q9VBH8
FBtr0084972	-	606	-	FBpp0084345	162 (aa)	-	Q9VBH8

Gene Model

Click here to download FBgn0039406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0039406	RpL34a	71	99.130	FBgn0037686	RpL34b	66	99.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039406	RpL34a	67	55.455	WBGene00004448	rpl-34	100	55.455	Caenorhabditis_elegans
FBgn0039406	RpL34a	66	62.037	ENSCING00000000338	-	97	62.037	Ciona_intestinalis
FBgn0039406	RpL34a	66	62.963	ENSCSAVG00000009906	-	97	62.963	Ciona_savignyi
FBgn0039406	RpL34a	63	60.784	YIL052C	RPL34B	92	59.459	Saccharomyces_cerevisiae
FBgn0039406	RpL34a	63	59.804	YER056C-A	RPL34A	92	58.559	Saccharomyces_cerevisiae
FBgn0039406	RpL34a	66	59.091	ENSSLDG00000008715	-	94	59.091	Seriola_lalandi_dorsalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002181	cytoplasmic translation	17927810.	TAS	Process
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0006412	translation	-	IEA	Process
GO:0006412	translation	-	ISM	Process
GO:0017022	myosin binding	18045836.	IPI	Function
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component
GO:0022625	cytosolic large ribosomal subunit	17927810.	TAS	Component
GO:0042254	ribosome biogenesis	21873635.	IBA	Process