EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039566 (Gene tree)
Gene ID: 43358
Gene Symbol: CG4849
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 3544 bases
Position: chr3R:27963415-27966958
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0084626	GTP_EFTU	PF00009.27	5.3e-46	1	1
FBpp0084626	GTP_EFTU_D2	PF03144.25	7.5e-13	1	1
FBpp0084626	EFG_IV	PF03764.18	2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0085257	-	3123	-	FBpp0084626	975 (aa)	-	Q86NS3

Gene Model

Click here to download FBgn0039566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0039566	CG4849	86	37.280	FBgn0000559	eEF2	98	37.280
FBgn0039566	CG4849	54	31.655	FBgn0263133	mEFG1	63	31.655

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039566	CG4849	100	75.077	ENSG00000108883	EFTUD2	100	88.060	Homo_sapiens
FBgn0039566	CG4849	100	74.667	ENSAPOG00000002433	eftud2	100	74.719	Acanthochromis_polyacanthus
FBgn0039566	CG4849	100	75.179	ENSAMEG00000018390	EFTUD2	100	75.282	Ailuropoda_melanoleuca
FBgn0039566	CG4849	100	71.795	ENSACIG00000009096	eftud2	100	71.853	Amphilophus_citrinellus
FBgn0039566	CG4849	87	72.033	ENSAOCG00000023385	eftud2	100	72.033	Amphiprion_ocellaris
FBgn0039566	CG4849	100	74.564	ENSAPEG00000003321	eftud2	100	74.616	Amphiprion_percula
FBgn0039566	CG4849	100	74.769	ENSATEG00000000457	eftud2	100	74.821	Anabas_testudineus
FBgn0039566	CG4849	99	72.279	ENSAPLG00000011036	EFTUD2	99	72.485	Anas_platyrhynchos
FBgn0039566	CG4849	100	75.077	ENSACAG00000007637	EFTUD2	100	74.974	Anolis_carolinensis
FBgn0039566	CG4849	100	75.077	ENSANAG00000025320	EFTUD2	100	75.077	Aotus_nancymaae
FBgn0039566	CG4849	100	74.872	ENSACLG00000001296	eftud2	100	74.923	Astatotilapia_calliptera
FBgn0039566	CG4849	100	73.926	ENSAMXG00000000568	eftud2	100	74.668	Astyanax_mexicanus
FBgn0039566	CG4849	100	75.077	ENSBTAG00000013526	EFTUD2	100	75.179	Bos_taurus
FBgn0039566	CG4849	99	67.111	WBGene00001166	eftu-2	99	67.454	Caenorhabditis_elegans
FBgn0039566	CG4849	100	75.077	ENSCJAG00000012349	EFTUD2	100	75.077	Callithrix_jacchus
FBgn0039566	CG4849	100	75.179	ENSCAFG00000014065	EFTUD2	100	75.282	Canis_familiaris
FBgn0039566	CG4849	100	75.179	ENSCAFG00020009633	EFTUD2	100	75.282	Canis_lupus_dingo
FBgn0039566	CG4849	100	75.077	ENSCHIG00000011603	EFTUD2	100	75.179	Capra_hircus
FBgn0039566	CG4849	100	74.872	ENSTSYG00000013172	EFTUD2	100	75.077	Carlito_syrichta
FBgn0039566	CG4849	100	75.077	ENSCAPG00000014639	EFTUD2	100	75.077	Cavia_aperea
FBgn0039566	CG4849	100	75.077	ENSCPOG00000010566	EFTUD2	100	75.077	Cavia_porcellus
FBgn0039566	CG4849	100	75.077	ENSCCAG00000035302	EFTUD2	100	75.077	Cebus_capucinus
FBgn0039566	CG4849	100	75.077	ENSCATG00000035809	EFTUD2	100	75.077	Cercocebus_atys
FBgn0039566	CG4849	100	74.872	ENSCLAG00000014733	EFTUD2	100	75.077	Chinchilla_lanigera
FBgn0039566	CG4849	100	75.077	ENSCSAG00000003614	EFTUD2	100	75.077	Chlorocebus_sabaeus
FBgn0039566	CG4849	91	66.591	ENSCHOG00000010031	EFTUD2	99	65.781	Choloepus_hoffmanni
FBgn0039566	CG4849	100	74.872	ENSCPBG00000008904	EFTUD2	100	74.872	Chrysemys_picta_bellii
FBgn0039566	CG4849	100	73.749	ENSCING00000009372	-	100	74.055	Ciona_intestinalis
FBgn0039566	CG4849	99	73.191	ENSCSAVG00000004985	-	99	75.236	Ciona_savignyi
FBgn0039566	CG4849	100	75.077	ENSCANG00000026557	EFTUD2	100	75.077	Colobus_angolensis_palliatus
FBgn0039566	CG4849	100	74.769	ENSCGRG00001009904	Eftud2	100	75.385	Cricetulus_griseus_chok1gshd
FBgn0039566	CG4849	100	74.769	ENSCGRG00000003825	Eftud2	100	75.385	Cricetulus_griseus_crigri
FBgn0039566	CG4849	100	74.154	ENSCSEG00000016775	eftud2	100	74.590	Cynoglossus_semilaevis
FBgn0039566	CG4849	100	75.077	ENSCVAG00000012537	eftud2	100	75.333	Cyprinodon_variegatus
FBgn0039566	CG4849	100	74.359	ENSDARG00000012261	eftud2	100	74.667	Danio_rerio
FBgn0039566	CG4849	100	74.667	ENSDNOG00000008033	EFTUD2	100	74.667	Dasypus_novemcinctus
FBgn0039566	CG4849	100	75.077	ENSDORG00000011566	Eftud2	100	75.282	Dipodomys_ordii
FBgn0039566	CG4849	92	89.674	ENSETEG00000005678	EFTUD2	92	89.674	Echinops_telfairi
FBgn0039566	CG4849	74	88.557	ENSEBUG00000004047	-	96	78.164	Eptatretus_burgeri
FBgn0039566	CG4849	100	75.179	ENSEASG00005010321	EFTUD2	100	75.282	Equus_asinus_asinus
FBgn0039566	CG4849	100	75.179	ENSECAG00000019363	EFTUD2	93	75.282	Equus_caballus
FBgn0039566	CG4849	83	89.831	ENSEEUG00000011128	EFTUD2	92	89.831	Erinaceus_europaeus
FBgn0039566	CG4849	100	73.641	ENSELUG00000017169	eftud2	100	73.900	Esox_lucius
FBgn0039566	CG4849	100	75.179	ENSFCAG00000005466	EFTUD2	100	75.282	Felis_catus
FBgn0039566	CG4849	100	75.077	ENSFALG00000007551	EFTUD2	100	75.282	Ficedula_albicollis
FBgn0039566	CG4849	100	74.769	ENSFDAG00000013143	EFTUD2	100	75.051	Fukomys_damarensis
FBgn0039566	CG4849	100	74.872	ENSFHEG00000013479	eftud2	100	75.128	Fundulus_heteroclitus
FBgn0039566	CG4849	100	74.154	ENSGMOG00000014277	eftud2	100	74.898	Gadus_morhua
FBgn0039566	CG4849	100	75.179	ENSGALG00000000988	EFTUD2	99	76.649	Gallus_gallus
FBgn0039566	CG4849	100	75.179	ENSGAFG00000002263	eftud2	100	75.333	Gambusia_affinis
FBgn0039566	CG4849	100	74.256	ENSGACG00000009163	eftud2	100	74.719	Gasterosteus_aculeatus
FBgn0039566	CG4849	100	75.077	ENSGGOG00000012999	EFTUD2	100	75.077	Gorilla_gorilla
FBgn0039566	CG4849	100	74.769	ENSHBUG00000023546	eftud2	100	74.821	Haplochromis_burtoni
FBgn0039566	CG4849	100	74.564	ENSHGLG00000014497	EFTUD2	100	74.974	Heterocephalus_glaber_female
FBgn0039566	CG4849	100	74.564	ENSHGLG00100013432	EFTUD2	100	74.974	Heterocephalus_glaber_male
FBgn0039566	CG4849	100	74.974	ENSHCOG00000017689	eftud2	100	75.333	Hippocampus_comes
FBgn0039566	CG4849	100	74.256	ENSIPUG00000023182	Eftud2	100	75.077	Ictalurus_punctatus
FBgn0039566	CG4849	91	76.378	ENSSTOG00000012188	EFTUD2	100	71.897	Ictidomys_tridecemlineatus
FBgn0039566	CG4849	94	76.881	ENSJJAG00000018268	Eftud2	100	75.906	Jaculus_jaculus
FBgn0039566	CG4849	100	74.256	ENSKMAG00000021027	eftud2	100	74.309	Kryptolebias_marmoratus
FBgn0039566	CG4849	95	73.843	ENSLBEG00000005875	eftud2	100	76.146	Labrus_bergylta
FBgn0039566	CG4849	100	75.077	ENSLACG00000012918	EFTUD2	100	75.282	Latimeria_chalumnae
FBgn0039566	CG4849	100	74.719	ENSLOCG00000011460	eftud2	100	74.974	Lepisosteus_oculatus
FBgn0039566	CG4849	100	74.974	ENSLAFG00000015344	EFTUD2	99	75.077	Loxodonta_africana
FBgn0039566	CG4849	100	75.077	ENSMFAG00000042655	EFTUD2	100	75.077	Macaca_fascicularis
FBgn0039566	CG4849	100	75.077	ENSMMUG00000013118	EFTUD2	100	88.060	Macaca_mulatta
FBgn0039566	CG4849	100	75.077	ENSMNEG00000037895	EFTUD2	100	75.077	Macaca_nemestrina
FBgn0039566	CG4849	100	75.077	ENSMLEG00000032960	EFTUD2	100	75.077	Mandrillus_leucophaeus
FBgn0039566	CG4849	100	74.974	ENSMAMG00000022190	eftud2	100	74.923	Mastacembelus_armatus
FBgn0039566	CG4849	100	74.872	ENSMZEG00005022885	eftud2	100	74.923	Maylandia_zebra
FBgn0039566	CG4849	100	75.026	ENSMGAG00000010083	EFTUD2	99	75.230	Meleagris_gallopavo
FBgn0039566	CG4849	100	74.872	ENSMAUG00000021178	Eftud2	100	75.282	Mesocricetus_auratus
FBgn0039566	CG4849	100	75.077	ENSMICG00000016592	EFTUD2	100	75.077	Microcebus_murinus
FBgn0039566	CG4849	100	74.872	ENSMOCG00000009039	-	100	75.282	Microtus_ochrogaster
FBgn0039566	CG4849	92	60.246	ENSMOCG00000017653	-	90	60.582	Microtus_ochrogaster
FBgn0039566	CG4849	87	77.321	ENSMMOG00000020811	eftud2	100	77.321	Mola_mola
FBgn0039566	CG4849	100	74.974	ENSMODG00000011347	EFTUD2	100	74.974	Monodelphis_domestica
FBgn0039566	CG4849	87	76.733	ENSMALG00000014501	eftud2	100	76.733	Monopterus_albus
FBgn0039566	CG4849	100	74.769	MGP_CAROLIEiJ_G0017263	Eftud2	100	75.385	Mus_caroli
FBgn0039566	CG4849	100	74.872	ENSMUSG00000020929	Eftud2	100	75.385	Mus_musculus
FBgn0039566	CG4849	100	74.769	MGP_PahariEiJ_G0018393	Eftud2	100	75.385	Mus_pahari
FBgn0039566	CG4849	100	74.769	MGP_SPRETEiJ_G0018106	Eftud2	100	75.385	Mus_spretus
FBgn0039566	CG4849	97	74.762	ENSMPUG00000009136	EFTUD2	90	75.079	Mustela_putorius_furo
FBgn0039566	CG4849	100	75.179	ENSMLUG00000012164	EFTUD2	99	75.282	Myotis_lucifugus
FBgn0039566	CG4849	100	74.974	ENSNGAG00000017834	Eftud2	100	75.385	Nannospalax_galili
FBgn0039566	CG4849	100	74.769	ENSNBRG00000020081	eftud2	100	74.821	Neolamprologus_brichardi
FBgn0039566	CG4849	97	72.881	ENSNLEG00000005210	EFTUD2	96	73.411	Nomascus_leucogenys
FBgn0039566	CG4849	100	71.590	ENSMEUG00000015620	EFTUD2	100	71.590	Notamacropus_eugenii
FBgn0039566	CG4849	100	68.000	ENSOPRG00000016323	EFTUD2	100	68.615	Ochotona_princeps
FBgn0039566	CG4849	97	60.773	ENSODEG00000003385	-	100	60.773	Octodon_degus
FBgn0039566	CG4849	100	74.872	ENSODEG00000018041	-	100	75.051	Octodon_degus
FBgn0039566	CG4849	100	74.872	ENSONIG00000000912	eftud2	100	74.923	Oreochromis_niloticus
FBgn0039566	CG4849	100	74.974	ENSOCUG00000006879	EFTUD2	100	75.179	Oryctolagus_cuniculus
FBgn0039566	CG4849	100	74.564	ENSORLG00000003109	eftud2	100	75.282	Oryzias_latipes
FBgn0039566	CG4849	100	74.667	ENSORLG00020009865	eftud2	100	75.282	Oryzias_latipes_hni
FBgn0039566	CG4849	100	74.667	ENSORLG00015002611	eftud2	99	76.881	Oryzias_latipes_hsok
FBgn0039566	CG4849	100	74.051	ENSOGAG00000012918	EFTUD2	100	74.051	Otolemur_garnettii
FBgn0039566	CG4849	100	75.077	ENSOARG00000009078	EFTUD2	97	75.179	Ovis_aries
FBgn0039566	CG4849	100	75.077	ENSPPAG00000029450	EFTUD2	100	75.179	Pan_paniscus
FBgn0039566	CG4849	100	75.179	ENSPPRG00000010981	EFTUD2	100	75.282	Panthera_pardus
FBgn0039566	CG4849	100	75.179	ENSPTIG00000007703	EFTUD2	100	75.282	Panthera_tigris_altaica
FBgn0039566	CG4849	100	75.077	ENSPTRG00000009287	EFTUD2	100	75.179	Pan_troglodytes
FBgn0039566	CG4849	100	75.077	ENSPANG00000021284	EFTUD2	100	75.077	Papio_anubis
FBgn0039566	CG4849	93	72.857	ENSPSIG00000004505	EFTUD2	99	72.967	Pelodiscus_sinensis
FBgn0039566	CG4849	100	68.308	ENSPMGG00000007281	eftud2	100	68.718	Periophthalmus_magnuspinnatus
FBgn0039566	CG4849	100	74.872	ENSPEMG00000005129	Eftud2	100	75.153	Peromyscus_maniculatus_bairdii
FBgn0039566	CG4849	100	74.974	ENSPCIG00000015027	EFTUD2	100	74.974	Phascolarctos_cinereus
FBgn0039566	CG4849	100	75.179	ENSPFOG00000008515	eftud2	100	75.333	Poecilia_formosa
FBgn0039566	CG4849	100	75.179	ENSPLAG00000010393	eftud2	100	75.333	Poecilia_latipinna
FBgn0039566	CG4849	100	75.179	ENSPMEG00000005087	eftud2	100	75.333	Poecilia_mexicana
FBgn0039566	CG4849	100	74.154	ENSPPYG00000008320	EFTUD2	100	74.154	Pongo_abelii
FBgn0039566	CG4849	100	71.692	ENSPCAG00000000812	EFTUD2	100	71.692	Procavia_capensis
FBgn0039566	CG4849	100	75.077	ENSPCOG00000020029	EFTUD2	100	75.077	Propithecus_coquereli
FBgn0039566	CG4849	100	71.795	ENSPVAG00000016155	EFTUD2	100	71.795	Pteropus_vampyrus
FBgn0039566	CG4849	100	74.872	ENSPNYG00000012448	eftud2	100	74.923	Pundamilia_nyererei
FBgn0039566	CG4849	100	74.359	ENSPNAG00000012490	eftud2	100	75.282	Pygocentrus_nattereri
FBgn0039566	CG4849	100	74.974	ENSRNOG00000002818	Eftud2	100	75.179	Rattus_norvegicus
FBgn0039566	CG4849	100	75.077	ENSRBIG00000043255	EFTUD2	100	75.077	Rhinopithecus_bieti
FBgn0039566	CG4849	100	75.077	ENSRROG00000042925	EFTUD2	100	75.077	Rhinopithecus_roxellana
FBgn0039566	CG4849	97	34.289	YKL173W	SNU114	97	34.486	Saccharomyces_cerevisiae
FBgn0039566	CG4849	100	75.077	ENSSBOG00000021892	EFTUD2	100	75.077	Saimiri_boliviensis_boliviensis
FBgn0039566	CG4849	94	76.772	ENSSHAG00000008134	EFTUD2	100	75.264	Sarcophilus_harrisii
FBgn0039566	CG4849	100	74.872	ENSSFOG00015023272	eftud2	100	75.026	Scleropages_formosus
FBgn0039566	CG4849	100	74.769	ENSSMAG00000010174	eftud2	100	75.441	Scophthalmus_maximus
FBgn0039566	CG4849	100	74.667	ENSSDUG00000022675	eftud2	100	74.719	Seriola_dumerili
FBgn0039566	CG4849	100	74.667	ENSSLDG00000001595	eftud2	100	74.719	Seriola_lalandi_dorsalis
FBgn0039566	CG4849	100	68.821	ENSSARG00000008664	EFTUD2	100	68.821	Sorex_araneus
FBgn0039566	CG4849	100	74.667	ENSSPUG00000010249	EFTUD2	100	74.769	Sphenodon_punctatus
FBgn0039566	CG4849	100	74.769	ENSSPAG00000016235	eftud2	99	74.821	Stegastes_partitus
FBgn0039566	CG4849	100	75.077	ENSSSCG00000017346	EFTUD2	100	75.179	Sus_scrofa
FBgn0039566	CG4849	82	74.906	ENSTGUG00000002065	EFTUD2	99	73.839	Taeniopygia_guttata
FBgn0039566	CG4849	100	73.846	ENSTRUG00000016422	eftud2	100	73.900	Takifugu_rubripes
FBgn0039566	CG4849	100	71.093	ENSTNIG00000005346	eftud2	99	71.152	Tetraodon_nigroviridis
FBgn0039566	CG4849	100	69.641	ENSTBEG00000011337	EFTUD2	100	70.154	Tupaia_belangeri
FBgn0039566	CG4849	90	73.243	ENSTTRG00000006230	EFTUD2	93	80.000	Tursiops_truncatus
FBgn0039566	CG4849	100	74.359	ENSUAMG00000000399	EFTUD2	100	74.359	Ursus_americanus
FBgn0039566	CG4849	100	75.179	ENSUMAG00000014323	EFTUD2	100	75.282	Ursus_maritimus
FBgn0039566	CG4849	88	88.060	ENSVPAG00000002748	EFTUD2	88	88.060	Vicugna_pacos
FBgn0039566	CG4849	100	75.179	ENSVVUG00000018113	EFTUD2	100	75.282	Vulpes_vulpes
FBgn0039566	CG4849	96	76.231	ENSXETG00000003394	eftud2	99	76.231	Xenopus_tropicalis
FBgn0039566	CG4849	81	76.815	ENSXCOG00000017309	eftud2	96	76.815	Xiphophorus_couchianus
FBgn0039566	CG4849	100	75.179	ENSXMAG00000008494	eftud2	100	75.333	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0003746	translation elongation factor activity	10908586.	ISS	Function
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005682	U5 snRNP	10908584.	ISS	Component
GO:0005737	cytoplasm	24722212.	IDA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	10908586.	ISS	Component
GO:0006414	translational elongation	10908586.	ISS	Process
GO:0010628	positive regulation of gene expression	24643257.	IMP	Process
GO:0030532	small nuclear ribonucleoprotein complex	24722212.	IPI	Component
GO:0030532	small nuclear ribonucleoprotein complex	10908584.	ISS	Component
GO:0030623	U5 snRNA binding	21873635.	IBA	Function
GO:0046540	U4/U6 x U5 tri-snRNP complex	21873635.	IBA	Component
GO:0071007	U2-type catalytic step 2 spliceosome	21873635.	IBA	Component
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component