EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0039600 (Gene tree)
Gene ID: 43399
Gene Symbol: CG1646
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 5253
Position: chr3R: 28812102-28817354
Accession
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0113301	-	4604	-	FBpp0112213	501 (aa)	-	Q7KRW8-6
FBtr0085325	-	3573	-	FBpp0084694	1009 (aa)	-	Q7KRW8-3
FBtr0085323	-	3563	-	FBpp0084692	1009 (aa)	-	Q7KRW8-3
FBtr0085322	-	3405	-	FBpp0084691	1066 (aa)	-	Q7KRW8
FBtr0113299	-	3582	-	FBpp0112211	1009 (aa)	-	Q7KRW8-3

Gene Model

Click here to download FBgn0039600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039600's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000243	commitment complex	21873635.	IBA	Component
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	15492211.	HMP	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	19218244.	IMP	Process
GO:0000395	mRNA 5'-splice site recognition	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	10908584.	ISS	Process
GO:0005634	nucleus	15492211.	IC	Component
GO:0005685	U1 snRNP	21873635.	IBA	Component
GO:0005685	U1 snRNP	10908584.	ISS	Component
GO:0030627	pre-mRNA 5'-splice site binding	21873635.	IBA	Function
GO:0071004	U2-type prespliceosome	21873635.	IBA	Component