EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039635 (Gene tree)
Gene ID: 43437
Gene Symbol: CG11876
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 3127
Position: chr3R: 29113071-29116197
Accession
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0085369	-	1386	-	FBpp0084738	365 (aa)	-	Q7K5K3
FBtr0085368	-	1025	-	FBpp0084737	273 (aa)	-	Q8IML6
FBtr0085367	-	991	-	FBpp0084736	273 (aa)	-	Q8IML6
FBtr0085366	-	1455	-	FBpp0084735	365 (aa)	-	Q7K5K3

Gene Model

Click here to download FBgn0039635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039635's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039635	CG11876	90	70.213	WBGene00015413	pdhb-1	93	70.213	Caenorhabditis_elegans
FBgn0039635	CG11876	97	67.139	ENSG00000168291	PDHB	96	70.031	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity	-	ISS	Function
GO:0005739	mitochondrion	16212416.19317464.	HDA	Component
GO:0005739	mitochondrion	29501567.	IDA	Component
GO:0006086	acetyl-CoA biosynthetic process from pyruvate	-	IEA	Process
GO:0006090	pyruvate metabolic process	-	ISS	Process
GO:0045254	pyruvate dehydrogenase complex	-	ISS	Component