EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039765 (Gene tree)
Gene ID: 43609
Gene Symbol: mRpS18C
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 583 bases
Position: chr3R:30423974-30424556
Accession: FBgn0039765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0084989	Ribosomal_S18	PF01084.20	3.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0085625	-	528	-	FBpp0084989	140 (aa)	-	Q9VA81

Gene Model

Click here to download FBgn0039765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039765	mRpS18C	66	49.462	ENSACAG00000010948	-	99	49.462	Anolis_carolinensis
FBgn0039765	mRpS18C	95	40.146	WBGene00020499	T14B4.2	99	40.146	Caenorhabditis_elegans
FBgn0039765	mRpS18C	64	46.067	ENSCAPG00000012030	-	94	46.067	Cavia_aperea
FBgn0039765	mRpS18C	71	46.000	ENSEBUG00000006201	-	64	46.000	Eptatretus_burgeri
FBgn0039765	mRpS18C	62	54.023	ENSFALG00000005265	-	93	54.023	Ficedula_albicollis
FBgn0039765	mRpS18C	65	54.945	ENSMGAG00000008136	-	82	54.945	Meleagris_gallopavo
FBgn0039765	mRpS18C	61	51.163	ENSMAUG00000001167	-	94	51.163	Mesocricetus_auratus
FBgn0039765	mRpS18C	66	52.688	ENSPSIG00000015848	-	99	52.688	Pelodiscus_sinensis
FBgn0039765	mRpS18C	64	50.562	ENSSARG00000008239	-	95	50.562	Sorex_araneus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279123.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	11279123.	ISS	Component
GO:0005763	mitochondrial small ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	11279123.	ISS	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function