EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0039808 (Gene tree)
Gene ID: 43660
Gene Symbol: CG12071
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 3944 bases
Position: chr3R:30877084-30881027
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0312354	zf-C2H2	PF00096.26	6.1e-15	1	3
FBpp0312354	zf-C2H2	PF00096.26	6.1e-15	2	3
FBpp0312354	zf-C2H2	PF00096.26	6.1e-15	3	3
FBpp0312355	zf-C2H2	PF00096.26	6.1e-15	1	3
FBpp0312355	zf-C2H2	PF00096.26	6.1e-15	2	3
FBpp0312355	zf-C2H2	PF00096.26	6.1e-15	3	3
FBpp0311048	zf-C2H2	PF00096.26	4.4e-14	1	2
FBpp0311048	zf-C2H2	PF00096.26	4.4e-14	2	2
FBpp0311049	zf-C2H2	PF00096.26	4.4e-14	1	2
FBpp0311049	zf-C2H2	PF00096.26	4.4e-14	2	2
FBpp0311048	zf-met	PF12874.7	1.5e-06	1	1
FBpp0311049	zf-met	PF12874.7	1.5e-06	1	1
FBpp0312354	zf-met	PF12874.7	3.8e-06	1	1
FBpp0312355	zf-met	PF12874.7	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0346758	-	2155	-	FBpp0312355	338 (aa)	-	A0A126GV33
FBtr0346757	-	2640	-	FBpp0312354	338 (aa)	-	A0A126GV33
FBtr0344716	-	2640	-	FBpp0311049	581 (aa)	-	Q9VA29
FBtr0344715	-	2155	-	FBpp0311048	581 (aa)	-	Q9VA29

Gene Model

Click here to download FBgn0039808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039808's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISS	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISS	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISS	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0043565	sequence-specific DNA binding	21873635.	IBA	Function
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045893	positive regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process