EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039868 (Gene tree)
Gene ID: 43735
Gene Symbol: CG11563
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 965 bases
Position: chr3R:31737035-31737999
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0085192	Nop16	PF09420.10	1.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0085831	-	831	-	FBpp0085192	207 (aa)	-	Q8MZ24

Gene Model

Click here to download FBgn0039868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039868's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039868	CG11563	78	31.707	ENSBTAG00000010734	NOP16	80	30.357	Bos_taurus
FBgn0039868	CG11563	78	31.707	ENSCHIG00000022082	-	80	30.357	Capra_hircus
FBgn0039868	CG11563	87	30.159	ENSCPBG00000022647	-	93	30.159	Chrysemys_picta_bellii
FBgn0039868	CG11563	91	31.771	ENSCING00000006179	-	94	31.771	Ciona_intestinalis
FBgn0039868	CG11563	78	31.707	ENSEASG00005011988	-	80	30.357	Equus_asinus_asinus
FBgn0039868	CG11563	78	31.707	ENSECAG00000021354	NOP16	80	30.357	Equus_caballus
FBgn0039868	CG11563	78	30.488	ENSSTOG00000004869	-	81	30.357	Ictidomys_tridecemlineatus
FBgn0039868	CG11563	88	31.217	ENSJJAG00000017655	Nop16	94	30.052	Jaculus_jaculus
FBgn0039868	CG11563	88	32.275	ENSMOCG00000020788	Nop16	94	31.088	Microtus_ochrogaster
FBgn0039868	CG11563	88	31.746	MGP_CAROLIEiJ_G0018538	Nop16	94	30.052	Mus_caroli
FBgn0039868	CG11563	78	31.707	ENSOGAG00000000824	-	80	30.357	Otolemur_garnettii
FBgn0039868	CG11563	78	31.707	ENSOARG00000002165	-	80	30.357	Ovis_aries
FBgn0039868	CG11563	88	31.746	ENSPEMG00000020268	Nop16	94	30.052	Peromyscus_maniculatus_bairdii
FBgn0039868	CG11563	87	30.811	ENSPCIG00000009782	-	92	30.270	Phascolarctos_cinereus
FBgn0039868	CG11563	88	32.275	ENSRNOG00000017284	Nop16	94	30.570	Rattus_norvegicus
FBgn0039868	CG11563	87	30.208	ENSSPUG00000006508	-	93	30.159	Sphenodon_punctatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	ISS	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0042273	ribosomal large subunit biogenesis	21873635.	IBA	Process