EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039920 (Gene tree)
Gene ID: 43810
Gene Symbol: CG11360
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 19509 bases
Position: chr4:671142-690650
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0088160	KH_1	PF00013.29	1.6e-25	1	2
FBpp0088160	KH_1	PF00013.29	1.6e-25	2	2
FBpp0302676	KH_1	PF00013.29	1.6e-25	1	2
FBpp0302676	KH_1	PF00013.29	1.6e-25	2	2
FBpp0302677	KH_1	PF00013.29	1.6e-25	1	2
FBpp0302677	KH_1	PF00013.29	1.6e-25	2	2
FBpp0302678	KH_1	PF00013.29	1.6e-25	1	2
FBpp0302678	KH_1	PF00013.29	1.6e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0089091	-	5558	-	FBpp0088160	628 (aa)	-	Q9V4F3
FBtr0310540	-	3716	-	FBpp0302677	628 (aa)	-	Q9V4F3
FBtr0310539	-	6932	-	FBpp0302676	628 (aa)	-	Q4V5T0
FBtr0310541	-	4156	-	FBpp0302678	628 (aa)	-	Q9V4F3

Gene Model

Click here to download FBgn0039920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039920	CG11360	50	56.538	ENSCING00000002603	-	55	56.538	Ciona_intestinalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	15492211.	HMP	Process
GO:0003723	RNA binding	-	ISS	Function
GO:0005634	nucleus	15492211.	IC	Component
GO:0008270	zinc ion binding	21912646.	ISM	Function