EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0039966 (Gene tree)
Gene ID: 3355163
Gene Symbol: Rab21
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1270 bases
Position: chrX:23012140-23013409
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0110426	GTP_EFTU	PF00009.27	3.2e-07	1	1
FBpp0289181	GTP_EFTU	PF00009.27	4.4e-07	1	1
FBpp0307861	GTP_EFTU	PF00009.27	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0336924	-	1050	-	FBpp0307861	222 (aa)	-	C0H6Z7
FBtr0299903	-	1064	-	FBpp0289181	222 (aa)	-	Q7PLE9
FBtr0111134	-	1077	-	FBpp0110426	189 (aa)	-	Q7PLE8

Gene Model

Click here to download FBgn0039966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0039966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0039966	Rab21	94	32.579	FBgn0031882	Rab30	91	33.333
FBgn0039966	Rab21	76	37.162	FBgn0037364	Rab23	64	37.931
FBgn0039966	Rab21	71	40.299	FBgn0285937	Rab1	75	41.290
FBgn0039966	Rab21	73	46.012	FBgn0014010	Rab5	74	46.012
FBgn0039966	Rab21	98	32.973	FBgn0031090	Rab35	96	33.981
FBgn0039966	Rab21	75	31.737	FBgn0041191	Rheb	91	31.737
FBgn0039966	Rab21	72	44.654	FBgn0015797	Rab6	76	44.654
FBgn0039966	Rab21	89	34.078	FBgn0015795	Rab7	95	35.859
FBgn0039966	Rab21	72	42.336	FBgn0015794	Rab18	81	41.104
FBgn0039966	Rab21	71	40.299	FBgn0015791	Rab14	72	39.355
FBgn0039966	Rab21	84	38.272	FBgn0015790	Rab11	86	39.130
FBgn0039966	Rab21	74	31.915	FBgn0003205	Ras85D	84	32.919
FBgn0039966	Rab21	72	31.250	FBgn0040370	CG13375	60	30.726
FBgn0039966	Rab21	76	30.137	FBgn0035255	RabX5	60	31.138
FBgn0039966	Rab21	76	37.500	FBgn0014009	Rab2	97	33.796
FBgn0039966	Rab21	86	36.269	FBgn0015372	RabX1	73	36.269
FBgn0039966	Rab21	72	37.805	FBgn0029959	Rab39	75	37.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0039966	Rab21	87	51.205	WBGene00004279	rab-21	91	53.968	Caenorhabditis_elegans
FBgn0039966	Rab21	74	63.855	ENSOGAG00000028133	RAB21	76	62.941	Otolemur_garnettii
FBgn0039966	Rab21	71	66.456	ENSPVAG00000017337	RAB21	91	65.432	Pteropus_vampyrus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	ISS	Function
GO:0005515	protein binding	22648168.	IPI	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005769	early endosome	21873635.	IBA	Component
GO:0005769	early endosome	22648168.	IDA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0016192	vesicle-mediated transport	-	ISS	Process
GO:0030866	cortical actin cytoskeleton organization	22648168.	IMP	Process
GO:0031982	vesicle	-	ISS	Component
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	-	ISS	Process
GO:0036313	phosphatidylinositol 3-kinase catalytic subunit binding	22648168.	IPI	Function
GO:0045202	synapse	22000105.	HDA	Component
GO:0055037	recycling endosome	22000105.	HDA	Component
GO:1901098	positive regulation of autophagosome maturation	25648148.	IMP	Process