EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0040207 (Gene tree)
Gene ID: 32581
Gene Symbol: kat80
Alias: -
Full Name: katanin 80
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 9174 bases
Position: chrX:16267007-16276180
Accession: FBgn0040207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0309385	eIF2A	PF08662.11	1.5e-08	1	1
FBpp0074025	eIF2A	PF08662.11	1.6e-08	1	1
FBpp0074026	eIF2A	PF08662.11	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0074247	-	3285	-	FBpp0074026	819 (aa)	-	Q0KHS0
FBtr0074246	-	3186	-	FBpp0074025	819 (aa)	-	Q0KHS0
FBtr0340443	-	3282	-	FBpp0309385	818 (aa)	-	X2JKM9

Gene Model

Click here to download FBgn0040207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0040207's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0040207	kat80	52	40.860	ENSCPBG00000026959	KATNB1	67	40.268	Chrysemys_picta_bellii
FBgn0040207	kat80	56	38.762	ENSFALG00000006902	KATNB1	69	38.762	Ficedula_albicollis
FBgn0040207	kat80	57	38.924	ENSGALG00000034373	KATNB1	75	41.237	Gallus_gallus
FBgn0040207	kat80	54	41.219	ENSGAGG00000020527	KATNB1	70	40.604	Gopherus_agassizii
FBgn0040207	kat80	55	39.597	ENSPSIG00000014651	KATNB1	79	35.467	Pelodiscus_sinensis
FBgn0040207	kat80	57	38.926	ENSSPUG00000007498	KATNB1	71	38.926	Sphenodon_punctatus
FBgn0040207	kat80	64	34.625	ENSTGUG00000004876	KATNB1	80	34.625	Taeniopygia_guttata

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005829	cytosol	25294944.	HDA	Component
GO:0007017	microtubule-based process	10908588.	ISS	Process
GO:0007019	microtubule depolymerization	21873635.	IBA	Process
GO:0008017	microtubule binding	-	IEA	Function
GO:0008017	microtubule binding	10908588.	ISS	Function
GO:0008352	katanin complex	21873635.	IBA	Component
GO:0008352	katanin complex	10908588.	ISS	Component
GO:0008568	microtubule-severing ATPase activity	21873635.	IBA	Function
GO:0046843	dorsal appendage formation	23545328.	IMP	Process
GO:0051013	microtubule severing	10908588.	ISS	Process