EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0040227 (Gene tree)
Gene ID: 42789
Gene Symbol: eIF3d1
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit d1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 2279 bases
Position: chr3R:23680039-23682317
Accession: FBgn0040227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0088565	eIF-3_zeta	PF05091.12	2.3e-214	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0089622	-	2012	-	FBpp0088565	560 (aa)	-	Q9VCK0

Gene Model

Click here to download FBgn0040227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0040227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0040227	eIF3d1	96	66.423	FBgn0037994	eIF3d2	96	66.978

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0040227	eIF3d1	93	58.790	ENSG00000100353	EIF3D	96	58.824	Homo_sapiens
FBgn0040227	eIF3d1	93	59.774	ENSAPOG00000002054	eif3d	98	59.730	Acanthochromis_polyacanthus
FBgn0040227	eIF3d1	93	59.168	ENSAMEG00000009639	EIF3D	96	59.203	Ailuropoda_melanoleuca
FBgn0040227	eIF3d1	93	59.774	ENSACIG00000013847	eif3d	93	59.811	Amphilophus_citrinellus
FBgn0040227	eIF3d1	93	59.551	ENSAOCG00000022455	eif3d	95	59.586	Amphiprion_ocellaris
FBgn0040227	eIF3d1	51	54.730	ENSAOCG00000005916	-	96	54.730	Amphiprion_ocellaris
FBgn0040227	eIF3d1	93	59.551	ENSAPEG00000020361	eif3d	95	59.586	Amphiprion_percula
FBgn0040227	eIF3d1	93	59.738	ENSATEG00000020784	eif3d	95	59.774	Anabas_testudineus
FBgn0040227	eIF3d1	94	54.972	ENSAPLG00000002632	EIF3D	99	54.906	Anas_platyrhynchos
FBgn0040227	eIF3d1	93	59.434	ENSACAG00000016308	EIF3D	96	59.470	Anolis_carolinensis
FBgn0040227	eIF3d1	93	58.790	ENSANAG00000026835	EIF3D	96	58.824	Aotus_nancymaae
FBgn0040227	eIF3d1	67	64.894	ENSACLG00000021852	eif3d	75	64.973	Astatotilapia_calliptera
FBgn0040227	eIF3d1	70	62.250	ENSACLG00000021712	eif3d	72	64.973	Astatotilapia_calliptera
FBgn0040227	eIF3d1	67	64.894	ENSACLG00000021768	EIF3D	75	64.973	Astatotilapia_calliptera
FBgn0040227	eIF3d1	93	59.774	ENSACLG00000021167	eif3d	96	59.811	Astatotilapia_calliptera
FBgn0040227	eIF3d1	67	64.894	ENSACLG00000021430	EIF3D	88	62.312	Astatotilapia_calliptera
FBgn0040227	eIF3d1	93	59.176	ENSAMXG00000017547	eif3d	95	59.211	Astyanax_mexicanus
FBgn0040227	eIF3d1	93	58.979	ENSBTAG00000001988	EIF3D	96	59.013	Bos_taurus
FBgn0040227	eIF3d1	94	44.065	WBGene00001227	eif-3.D	97	44.982	Caenorhabditis_elegans
FBgn0040227	eIF3d1	93	58.790	ENSCJAG00000013831	EIF3D	94	64.948	Callithrix_jacchus
FBgn0040227	eIF3d1	93	59.168	ENSCAFG00000001544	EIF3D	96	59.203	Canis_familiaris
FBgn0040227	eIF3d1	93	59.168	ENSCAFG00020004483	EIF3D	96	59.203	Canis_lupus_dingo
FBgn0040227	eIF3d1	93	58.979	ENSCHIG00000012106	EIF3D	96	59.013	Capra_hircus
FBgn0040227	eIF3d1	93	58.790	ENSTSYG00000008540	EIF3D	94	64.948	Carlito_syrichta
FBgn0040227	eIF3d1	93	57.925	ENSCAPG00000015164	EIF3D	94	57.955	Cavia_aperea
FBgn0040227	eIF3d1	93	58.979	ENSCPOG00000002529	EIF3D	96	59.013	Cavia_porcellus
FBgn0040227	eIF3d1	93	58.790	ENSCCAG00000027331	EIF3D	96	58.824	Cebus_capucinus
FBgn0040227	eIF3d1	93	58.790	ENSCATG00000045003	EIF3D	92	64.019	Cercocebus_atys
FBgn0040227	eIF3d1	93	58.979	ENSCLAG00000016545	EIF3D	96	59.013	Chinchilla_lanigera
FBgn0040227	eIF3d1	93	58.790	ENSCSAG00000007898	EIF3D	96	58.824	Chlorocebus_sabaeus
FBgn0040227	eIF3d1	93	57.656	ENSCHOG00000004811	EIF3D	96	57.685	Choloepus_hoffmanni
FBgn0040227	eIF3d1	93	60.189	ENSCPBG00000016309	EIF3D	96	60.227	Chrysemys_picta_bellii
FBgn0040227	eIF3d1	93	56.822	ENSCING00000003680	-	95	56.822	Ciona_intestinalis
FBgn0040227	eIF3d1	96	54.336	ENSCSAVG00000001450	-	87	66.814	Ciona_savignyi
FBgn0040227	eIF3d1	93	58.790	ENSCANG00000031179	EIF3D	96	58.824	Colobus_angolensis_palliatus
FBgn0040227	eIF3d1	93	58.979	ENSCGRG00001016584	EIF3D	96	59.013	Cricetulus_griseus_chok1gshd
FBgn0040227	eIF3d1	93	58.979	ENSCGRG00000000302	EIF3D	96	59.013	Cricetulus_griseus_crigri
FBgn0040227	eIF3d1	93	59.586	ENSCSEG00000020548	eif3d	95	59.623	Cynoglossus_semilaevis
FBgn0040227	eIF3d1	76	63.032	ENSCVAG00000001999	eif3d	83	63.102	Cyprinodon_variegatus
FBgn0040227	eIF3d1	93	59.398	ENSDARG00000021257	eif3d	93	65.789	Danio_rerio
FBgn0040227	eIF3d1	50	55.439	ENSDNOG00000018482	EIF3D	91	55.439	Dasypus_novemcinctus
FBgn0040227	eIF3d1	93	58.790	ENSDORG00000010491	Eif3d	96	58.824	Dipodomys_ordii
FBgn0040227	eIF3d1	91	47.217	ENSETEG00000002070	-	99	47.217	Echinops_telfairi
FBgn0040227	eIF3d1	93	47.137	ENSETEG00000009404	-	96	47.126	Echinops_telfairi
FBgn0040227	eIF3d1	92	46.304	ENSETEG00000016315	-	99	46.304	Echinops_telfairi
FBgn0040227	eIF3d1	67	41.867	ENSETEG00000020233	-	99	41.867	Echinops_telfairi
FBgn0040227	eIF3d1	85	58.058	ENSEBUG00000009405	eif3d	92	62.437	Eptatretus_burgeri
FBgn0040227	eIF3d1	93	58.979	ENSEASG00005018906	EIF3D	96	59.013	Equus_asinus_asinus
FBgn0040227	eIF3d1	93	58.601	ENSECAG00000022413	EIF3D	96	58.634	Equus_caballus
FBgn0040227	eIF3d1	93	53.409	ENSEEUG00000015771	EIF3D	96	53.422	Erinaceus_europaeus
FBgn0040227	eIF3d1	93	59.211	ENSELUG00000018698	eif3d	95	59.245	Esox_lucius
FBgn0040227	eIF3d1	93	59.168	ENSFCAG00000001131	EIF3D	96	59.203	Felis_catus
FBgn0040227	eIF3d1	93	59.699	ENSFALG00000013012	EIF3D	96	59.735	Ficedula_albicollis
FBgn0040227	eIF3d1	93	58.790	ENSFDAG00000004352	EIF3D	96	58.824	Fukomys_damarensis
FBgn0040227	eIF3d1	94	57.649	ENSGMOG00000013341	eif3d	97	57.678	Gadus_morhua
FBgn0040227	eIF3d1	93	59.699	ENSGALG00000012529	EIF3D	96	59.735	Gallus_gallus
FBgn0040227	eIF3d1	94	58.550	ENSGACG00000014538	eif3d	96	59.057	Gasterosteus_aculeatus
FBgn0040227	eIF3d1	93	60.189	ENSGAGG00000009617	EIF3D	96	60.227	Gopherus_agassizii
FBgn0040227	eIF3d1	93	58.790	ENSGGOG00000003428	EIF3D	96	58.824	Gorilla_gorilla
FBgn0040227	eIF3d1	93	59.551	ENSHBUG00000017230	eif3d	98	59.538	Haplochromis_burtoni
FBgn0040227	eIF3d1	93	47.566	ENSHGLG00000000135	-	95	47.556	Heterocephalus_glaber_female
FBgn0040227	eIF3d1	93	48.960	ENSHGLG00000006449	-	96	49.237	Heterocephalus_glaber_female
FBgn0040227	eIF3d1	93	58.979	ENSHGLG00000016422	-	96	59.013	Heterocephalus_glaber_female
FBgn0040227	eIF3d1	93	50.000	ENSHGLG00100001321	-	95	50.000	Heterocephalus_glaber_male
FBgn0040227	eIF3d1	93	49.049	ENSHGLG00100013710	-	96	49.046	Heterocephalus_glaber_male
FBgn0040227	eIF3d1	93	58.979	ENSHGLG00100007477	-	96	59.013	Heterocephalus_glaber_male
FBgn0040227	eIF3d1	93	59.774	ENSHCOG00000007799	eif3d	95	59.811	Hippocampus_comes
FBgn0040227	eIF3d1	93	59.023	ENSIPUG00000017267	eif3d	95	59.023	Ictalurus_punctatus
FBgn0040227	eIF3d1	93	58.979	ENSSTOG00000011335	EIF3D	96	59.013	Ictidomys_tridecemlineatus
FBgn0040227	eIF3d1	93	59.238	ENSJJAG00000010854	Eif3d	96	59.273	Jaculus_jaculus
FBgn0040227	eIF3d1	93	59.551	ENSKMAG00000007133	eif3d	95	59.586	Kryptolebias_marmoratus
FBgn0040227	eIF3d1	93	59.023	ENSLBEG00000005296	eif3d	95	59.057	Labrus_bergylta
FBgn0040227	eIF3d1	93	58.945	ENSLACG00000001606	EIF3D	94	58.979	Latimeria_chalumnae
FBgn0040227	eIF3d1	95	58.519	ENSLAFG00000001714	EIF3D	96	59.203	Loxodonta_africana
FBgn0040227	eIF3d1	93	58.790	ENSMFAG00000000481	EIF3D	94	64.948	Macaca_fascicularis
FBgn0040227	eIF3d1	93	58.790	ENSMMUG00000012754	EIF3D	95	61.233	Macaca_mulatta
FBgn0040227	eIF3d1	93	58.790	ENSMNEG00000012843	EIF3D	94	64.948	Macaca_nemestrina
FBgn0040227	eIF3d1	93	58.790	ENSMLEG00000037251	EIF3D	94	64.948	Mandrillus_leucophaeus
FBgn0040227	eIF3d1	93	59.774	ENSMAMG00000020219	eif3d	95	59.811	Mastacembelus_armatus
FBgn0040227	eIF3d1	93	59.551	ENSMZEG00005023294	eif3d	96	59.586	Maylandia_zebra
FBgn0040227	eIF3d1	93	56.660	ENSMZEG00005024006	eif3d	96	56.685	Maylandia_zebra
FBgn0040227	eIF3d1	51	56.122	ENSMGAG00000012653	EIF3D	99	56.122	Meleagris_gallopavo
FBgn0040227	eIF3d1	93	58.979	ENSMAUG00000013161	Eif3d	96	59.013	Mesocricetus_auratus
FBgn0040227	eIF3d1	93	58.979	ENSMICG00000012161	EIF3D	94	64.948	Microcebus_murinus
FBgn0040227	eIF3d1	93	58.979	ENSMOCG00000011605	Eif3d	96	59.013	Microtus_ochrogaster
FBgn0040227	eIF3d1	93	59.023	ENSMMOG00000021496	eif3d	95	59.057	Mola_mola
FBgn0040227	eIF3d1	93	59.623	ENSMODG00000000821	EIF3D	96	59.659	Monodelphis_domestica
FBgn0040227	eIF3d1	93	59.551	ENSMALG00000019436	eif3d	95	59.586	Monopterus_albus
FBgn0040227	eIF3d1	93	58.979	MGP_CAROLIEiJ_G0019973	Eif3d	96	59.013	Mus_caroli
FBgn0040227	eIF3d1	93	58.979	ENSMUSG00000016554	Eif3d	96	59.013	Mus_musculus
FBgn0040227	eIF3d1	93	58.979	MGP_PahariEiJ_G0019975	Eif3d	96	59.013	Mus_pahari
FBgn0040227	eIF3d1	93	58.979	MGP_SPRETEiJ_G0020871	Eif3d	96	59.013	Mus_spretus
FBgn0040227	eIF3d1	79	42.826	ENSMPUG00000012581	EIF3D	100	42.826	Mustela_putorius_furo
FBgn0040227	eIF3d1	93	59.168	ENSMLUG00000015857	EIF3D	96	59.203	Myotis_lucifugus
FBgn0040227	eIF3d1	93	58.979	ENSNGAG00000012038	Eif3d	96	59.013	Nannospalax_galili
FBgn0040227	eIF3d1	93	58.790	ENSNLEG00000014560	EIF3D	94	64.948	Nomascus_leucogenys
FBgn0040227	eIF3d1	93	59.623	ENSMEUG00000004561	EIF3D	96	59.659	Notamacropus_eugenii
FBgn0040227	eIF3d1	84	56.000	ENSOPRG00000006924	EIF3D	96	56.025	Ochotona_princeps
FBgn0040227	eIF3d1	93	58.979	ENSODEG00000011039	EIF3D	96	59.013	Octodon_degus
FBgn0040227	eIF3d1	93	59.398	ENSONIG00000009713	eif3d	95	59.434	Oreochromis_niloticus
FBgn0040227	eIF3d1	94	52.486	ENSOANG00000007483	EIF3D	99	52.407	Ornithorhynchus_anatinus
FBgn0040227	eIF3d1	93	58.979	ENSOCUG00000006363	EIF3D	96	59.013	Oryctolagus_cuniculus
FBgn0040227	eIF3d1	94	58.396	ENSORLG00000001449	eif3d	90	64.948	Oryzias_latipes
FBgn0040227	eIF3d1	50	54.196	ENSORLG00020013943	eif3d	95	54.196	Oryzias_latipes_hni
FBgn0040227	eIF3d1	93	58.801	ENSORLG00020000383	eif3d	94	58.835	Oryzias_latipes_hni
FBgn0040227	eIF3d1	50	54.196	ENSORLG00015006954	eif3d	94	54.196	Oryzias_latipes_hsok
FBgn0040227	eIF3d1	50	54.895	ENSORLG00015006930	eif3d	89	54.895	Oryzias_latipes_hsok
FBgn0040227	eIF3d1	50	52.448	ENSOMEG00000017372	eif3d	94	52.448	Oryzias_melastigma
FBgn0040227	eIF3d1	50	54.196	ENSOMEG00000017337	eif3d	94	54.196	Oryzias_melastigma
FBgn0040227	eIF3d1	93	58.790	ENSOGAG00000002978	EIF3D	96	58.824	Otolemur_garnettii
FBgn0040227	eIF3d1	93	58.979	ENSOARG00000018926	EIF3D	96	59.013	Ovis_aries
FBgn0040227	eIF3d1	93	58.790	ENSPPAG00000031183	EIF3D	96	58.824	Pan_paniscus
FBgn0040227	eIF3d1	93	59.168	ENSPPRG00000007244	EIF3D	96	59.203	Panthera_pardus
FBgn0040227	eIF3d1	93	58.223	ENSPTIG00000012272	EIF3D	96	58.254	Panthera_tigris_altaica
FBgn0040227	eIF3d1	93	58.790	ENSPTRG00000014313	EIF3D	96	58.824	Pan_troglodytes
FBgn0040227	eIF3d1	93	58.790	ENSPANG00000023980	EIF3D	92	64.019	Papio_anubis
FBgn0040227	eIF3d1	93	60.150	ENSPKIG00000013892	eif3d	95	60.000	Paramormyrops_kingsleyae
FBgn0040227	eIF3d1	93	60.189	ENSPSIG00000010983	EIF3D	96	60.227	Pelodiscus_sinensis
FBgn0040227	eIF3d1	92	57.390	ENSPMGG00000004524	eif3d	99	57.390	Periophthalmus_magnuspinnatus
FBgn0040227	eIF3d1	93	58.979	ENSPEMG00000014069	Eif3d	96	59.013	Peromyscus_maniculatus_bairdii
FBgn0040227	eIF3d1	50	53.497	ENSPMAG00000008165	eif3d	96	54.514	Petromyzon_marinus
FBgn0040227	eIF3d1	93	59.623	ENSPCIG00000021563	EIF3D	96	59.659	Phascolarctos_cinereus
FBgn0040227	eIF3d1	93	59.176	ENSPFOG00000007516	eif3d	95	59.211	Poecilia_formosa
FBgn0040227	eIF3d1	93	59.176	ENSPLAG00000015253	eif3d	95	59.211	Poecilia_latipinna
FBgn0040227	eIF3d1	93	58.989	ENSPMEG00000019987	eif3d	95	59.023	Poecilia_mexicana
FBgn0040227	eIF3d1	93	53.096	ENSPPYG00000011774	EIF3D	96	53.107	Pongo_abelii
FBgn0040227	eIF3d1	80	70.635	ENSPCAG00000007788	EIF3D	82	70.968	Procavia_capensis
FBgn0040227	eIF3d1	93	58.286	ENSPCOG00000014552	EIF3D	95	58.317	Propithecus_coquereli
FBgn0040227	eIF3d1	93	58.790	ENSPVAG00000002014	EIF3D	96	58.824	Pteropus_vampyrus
FBgn0040227	eIF3d1	93	59.363	ENSPNYG00000011917	eif3d	96	59.398	Pundamilia_nyererei
FBgn0040227	eIF3d1	93	58.989	ENSPNAG00000000176	eif3d	95	59.023	Pygocentrus_nattereri
FBgn0040227	eIF3d1	93	58.979	ENSRNOG00000005804	Eif3d	96	59.013	Rattus_norvegicus
FBgn0040227	eIF3d1	93	58.790	ENSRBIG00000041563	EIF3D	94	64.948	Rhinopithecus_bieti
FBgn0040227	eIF3d1	93	58.790	ENSRROG00000039588	EIF3D	94	64.948	Rhinopithecus_roxellana
FBgn0040227	eIF3d1	93	58.790	ENSSBOG00000032811	EIF3D	96	58.824	Saimiri_boliviensis_boliviensis
FBgn0040227	eIF3d1	93	59.623	ENSSHAG00000011209	EIF3D	96	59.659	Sarcophilus_harrisii
FBgn0040227	eIF3d1	93	59.551	ENSSFOG00015023800	eif3d	95	59.586	Scleropages_formosus
FBgn0040227	eIF3d1	93	59.023	ENSSMAG00000013962	eif3d	94	64.486	Scophthalmus_maximus
FBgn0040227	eIF3d1	93	59.363	ENSSDUG00000023224	eif3d	95	59.398	Seriola_dumerili
FBgn0040227	eIF3d1	93	59.774	ENSSLDG00000006833	eif3d	95	59.398	Seriola_lalandi_dorsalis
FBgn0040227	eIF3d1	84	56.118	ENSSARG00000012488	EIF3D	97	56.144	Sorex_araneus
FBgn0040227	eIF3d1	93	59.245	ENSSPUG00000011683	EIF3D	96	59.280	Sphenodon_punctatus
FBgn0040227	eIF3d1	93	59.551	ENSSPAG00000003591	eif3d	95	59.586	Stegastes_partitus
FBgn0040227	eIF3d1	93	58.979	ENSSSCG00000000141	EIF3D	96	59.013	Sus_scrofa
FBgn0040227	eIF3d1	93	59.510	ENSTGUG00000010728	EIF3D	96	59.546	Taeniopygia_guttata
FBgn0040227	eIF3d1	93	58.989	ENSTRUG00000007886	eif3d	95	59.023	Takifugu_rubripes
FBgn0040227	eIF3d1	96	58.000	ENSTNIG00000011263	eif3d	96	59.252	Tetraodon_nigroviridis
FBgn0040227	eIF3d1	87	57.927	ENSTBEG00000006268	EIF3D	96	58.487	Tupaia_belangeri
FBgn0040227	eIF3d1	93	58.412	ENSTTRG00000006637	EIF3D	96	58.444	Tursiops_truncatus
FBgn0040227	eIF3d1	93	59.168	ENSUAMG00000017485	EIF3D	96	59.203	Ursus_americanus
FBgn0040227	eIF3d1	93	59.168	ENSUMAG00000015827	EIF3D	96	59.203	Ursus_maritimus
FBgn0040227	eIF3d1	51	50.690	ENSVPAG00000000359	-	99	50.690	Vicugna_pacos
FBgn0040227	eIF3d1	93	59.168	ENSVVUG00000023578	EIF3D	96	59.203	Vulpes_vulpes
FBgn0040227	eIF3d1	93	58.724	ENSXETG00000027259	eif3d	95	58.757	Xenopus_tropicalis
FBgn0040227	eIF3d1	93	57.036	ENSXCOG00000011633	eif3d	96	57.062	Xiphophorus_couchianus
FBgn0040227	eIF3d1	93	59.551	ENSXMAG00000000954	eif3d	95	59.586	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	18797514.	IDA	Function
GO:0003743	translation initiation factor activity	10908586.	ISS	Function
GO:0005515	protein binding	17392269.	IPI	Function
GO:0005634	nucleus	18797514.	IDA	Component
GO:0005829	cytosol	10908586.	ISS	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	21873635.	IBA	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	18797514.	IDA	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	10908586.	ISS	Component
GO:0006413	translational initiation	21873635.	IBA	Process
GO:0006413	translational initiation	10908586.	ISS	Process
GO:0006446	regulation of translational initiation	18797514.	IDA	Process