EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0040235 (Gene tree)
Gene ID: 53435
Gene Symbol: c12.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1309 bases
Position: chrX:9317915-9319223
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0071259	Cwf_Cwc_15	PF04889.12	3e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0071324	-	1246	-	FBpp0071259	259 (aa)	-	Q9V3B6

Gene Model

Click here to download FBgn0040235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0040235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0040235	c12.1	100	49.084	ENSG00000150316	CWC15	100	49.259	Homo_sapiens
FBgn0040235	c12.1	100	48.000	ENSAMEG00000011392	CWC15	100	50.189	Ailuropoda_melanoleuca
FBgn0040235	c12.1	100	50.000	ENSAPLG00000003221	CWC15	100	49.632	Anas_platyrhynchos
FBgn0040235	c12.1	89	49.194	ENSACAG00000013987	CWC15	90	48.163	Anolis_carolinensis
FBgn0040235	c12.1	100	49.084	ENSANAG00000020484	CWC15	100	49.259	Aotus_nancymaae
FBgn0040235	c12.1	100	54.924	ENSAMXG00000007538	cwc15	100	55.303	Astyanax_mexicanus
FBgn0040235	c12.1	100	47.636	ENSBTAG00000007913	CWC15	100	49.632	Bos_taurus
FBgn0040235	c12.1	100	50.382	WBGene00011687	cwc-15	100	50.000	Caenorhabditis_elegans
FBgn0040235	c12.1	100	49.084	ENSCJAG00000040352	CWC15	100	49.259	Callithrix_jacchus
FBgn0040235	c12.1	100	46.909	ENSCAFG00000005959	-	100	50.189	Canis_familiaris
FBgn0040235	c12.1	100	47.636	ENSCAFG00000004134	CWC15	100	49.632	Canis_familiaris
FBgn0040235	c12.1	100	48.905	ENSCAFG00020016515	CWC15	100	49.815	Canis_lupus_dingo
FBgn0040235	c12.1	100	47.636	ENSCHIG00000013423	CWC15	100	49.632	Capra_hircus
FBgn0040235	c12.1	100	49.635	ENSTSYG00000000407	-	100	50.379	Carlito_syrichta
FBgn0040235	c12.1	100	49.084	ENSTSYG00000010873	-	100	49.259	Carlito_syrichta
FBgn0040235	c12.1	100	49.084	ENSCPOG00000006249	CWC15	100	49.259	Cavia_porcellus
FBgn0040235	c12.1	100	49.084	ENSCCAG00000026289	CWC15	100	49.259	Cebus_capucinus
FBgn0040235	c12.1	100	49.084	ENSCATG00000030235	CWC15	100	49.259	Cercocebus_atys
FBgn0040235	c12.1	100	49.084	ENSCLAG00000000129	CWC15	100	49.259	Chinchilla_lanigera
FBgn0040235	c12.1	100	49.084	ENSCSAG00000003299	CWC15	100	49.259	Chlorocebus_sabaeus
FBgn0040235	c12.1	100	50.730	ENSCPBG00000024037	CWC15	100	50.554	Chrysemys_picta_bellii
FBgn0040235	c12.1	100	48.077	ENSCING00000012768	-	100	46.923	Ciona_intestinalis
FBgn0040235	c12.1	100	47.692	ENSCSAVG00000003476	-	100	45.385	Ciona_savignyi
FBgn0040235	c12.1	100	49.084	ENSCANG00000028070	CWC15	100	49.259	Colobus_angolensis_palliatus
FBgn0040235	c12.1	100	49.084	ENSCGRG00001013337	Cwc15	100	49.259	Cricetulus_griseus_chok1gshd
FBgn0040235	c12.1	100	49.084	ENSCGRG00000015359	Cwc15	100	49.259	Cricetulus_griseus_crigri
FBgn0040235	c12.1	100	51.460	ENSCVAG00000014417	cwc15	100	52.652	Cyprinodon_variegatus
FBgn0040235	c12.1	100	54.307	ENSDARG00000013382	cwc15	100	51.698	Danio_rerio
FBgn0040235	c12.1	100	47.636	ENSDNOG00000041326	CWC15	100	49.632	Dasypus_novemcinctus
FBgn0040235	c12.1	87	36.032	ENSDNOG00000046295	-	66	47.260	Dasypus_novemcinctus
FBgn0040235	c12.1	100	51.331	ENSDORG00000011075	Cwc15	100	49.430	Dipodomys_ordii
FBgn0040235	c12.1	65	45.294	ENSETEG00000010889	-	99	38.235	Echinops_telfairi
FBgn0040235	c12.1	66	44.022	ENSETEG00000006649	-	100	47.701	Echinops_telfairi
FBgn0040235	c12.1	100	50.192	ENSEBUG00000013107	cwc15	100	47.893	Eptatretus_burgeri
FBgn0040235	c12.1	100	48.727	ENSEASG00005011279	CWC15	100	49.265	Equus_asinus_asinus
FBgn0040235	c12.1	100	47.636	ENSECAG00000013314	CWC15	100	49.632	Equus_caballus
FBgn0040235	c12.1	100	48.708	ENSEEUG00000002124	CWC15	100	50.943	Erinaceus_europaeus
FBgn0040235	c12.1	100	49.451	ENSFCAG00000007826	-	100	50.000	Felis_catus
FBgn0040235	c12.1	100	50.000	ENSFALG00000000326	CWC15	100	49.632	Ficedula_albicollis
FBgn0040235	c12.1	100	49.084	ENSFDAG00000014629	CWC15	100	53.612	Fukomys_damarensis
FBgn0040235	c12.1	100	52.453	ENSFHEG00000002105	cwc15	100	65.957	Fundulus_heteroclitus
FBgn0040235	c12.1	65	75.000	ENSGMOG00000016146	cwc15	100	43.382	Gadus_morhua
FBgn0040235	c12.1	100	49.630	ENSGALG00000017207	CWC15	100	49.265	Gallus_gallus
FBgn0040235	c12.1	100	49.270	ENSGAGG00000024008	CWC15	99	50.185	Gopherus_agassizii
FBgn0040235	c12.1	100	49.084	ENSGGOG00000011926	CWC15	100	49.259	Gorilla_gorilla
FBgn0040235	c12.1	100	49.632	ENSHBUG00000003341	cwc15	100	52.652	Haplochromis_burtoni
FBgn0040235	c12.1	99	47.710	ENSHGLG00000003773	-	100	44.275	Heterocephalus_glaber_female
FBgn0040235	c12.1	100	49.084	ENSHGLG00000006521	CWC15	100	49.259	Heterocephalus_glaber_female
FBgn0040235	c12.1	65	71.186	ENSHGLG00100003268	-	81	71.186	Heterocephalus_glaber_male
FBgn0040235	c12.1	100	48.718	ENSHGLG00100007904	-	100	47.909	Heterocephalus_glaber_male
FBgn0040235	c12.1	100	51.273	ENSHCOG00000006089	cwc15	100	52.453	Hippocampus_comes
FBgn0040235	c12.1	100	49.084	ENSSTOG00000002485	CWC15	100	49.259	Ictidomys_tridecemlineatus
FBgn0040235	c12.1	100	50.951	ENSJJAG00000012940	-	100	48.327	Jaculus_jaculus
FBgn0040235	c12.1	100	49.458	ENSJJAG00000012773	-	100	48.689	Jaculus_jaculus
FBgn0040235	c12.1	61	76.271	ENSJJAG00000016968	-	80	76.271	Jaculus_jaculus
FBgn0040235	c12.1	100	51.698	ENSKMAG00000011877	cwc15	100	51.136	Kryptolebias_marmoratus
FBgn0040235	c12.1	100	52.273	ENSLBEG00000026116	cwc15	100	52.273	Labrus_bergylta
FBgn0040235	c12.1	100	49.254	ENSLACG00000012239	CWC15	100	49.265	Latimeria_chalumnae
FBgn0040235	c12.1	100	50.365	ENSLOCG00000007570	cwc15	100	53.030	Lepisosteus_oculatus
FBgn0040235	c12.1	100	47.636	ENSLAFG00000004456	CWC15	100	49.632	Loxodonta_africana
FBgn0040235	c12.1	100	49.084	ENSMFAG00000044052	CWC15	100	49.259	Macaca_fascicularis
FBgn0040235	c12.1	100	49.084	ENSMMUG00000044962	CWC15	100	49.259	Macaca_mulatta
FBgn0040235	c12.1	100	49.084	ENSMNEG00000033968	CWC15	100	49.259	Macaca_nemestrina
FBgn0040235	c12.1	100	49.084	ENSMLEG00000035668	CWC15	100	49.259	Mandrillus_leucophaeus
FBgn0040235	c12.1	100	50.379	ENSMAMG00000013540	cwc15	100	53.409	Mastacembelus_armatus
FBgn0040235	c12.1	100	49.630	ENSMGAG00000015193	CWC15	100	49.265	Meleagris_gallopavo
FBgn0040235	c12.1	100	48.718	ENSMAUG00000011686	Cwc15	100	48.889	Mesocricetus_auratus
FBgn0040235	c12.1	100	49.084	ENSMICG00000042790	CWC15	100	49.259	Microcebus_murinus
FBgn0040235	c12.1	100	49.084	ENSMOCG00000016094	Cwc15	100	49.630	Microtus_ochrogaster
FBgn0040235	c12.1	100	49.275	ENSMMOG00000016343	cwc15	100	51.504	Mola_mola
FBgn0040235	c12.1	100	42.529	ENSMODG00000003709	-	100	40.996	Monodelphis_domestica
FBgn0040235	c12.1	99	47.985	ENSMODG00000000169	-	96	48.519	Monodelphis_domestica
FBgn0040235	c12.1	100	50.735	ENSMALG00000019325	cwc15	100	63.830	Monopterus_albus
FBgn0040235	c12.1	100	50.183	MGP_CAROLIEiJ_G0031782	Cwc15	100	50.951	Mus_caroli
FBgn0040235	c12.1	100	50.183	ENSMUSG00000004096	Cwc15	75	76.271	Mus_musculus
FBgn0040235	c12.1	100	50.183	MGP_PahariEiJ_G0014658	Cwc15	100	50.951	Mus_pahari
FBgn0040235	c12.1	100	50.916	MGP_SPRETEiJ_G0032902	Cwc15	100	50.951	Mus_spretus
FBgn0040235	c12.1	100	47.636	ENSMPUG00000012265	CWC15	100	49.632	Mustela_putorius_furo
FBgn0040235	c12.1	100	48.727	ENSMLUG00000002032	-	100	51.321	Myotis_lucifugus
FBgn0040235	c12.1	100	49.815	ENSMLUG00000026676	-	100	50.566	Myotis_lucifugus
FBgn0040235	c12.1	100	49.084	ENSNGAG00000016450	Cwc15	100	49.259	Nannospalax_galili
FBgn0040235	c12.1	100	49.084	ENSNLEG00000031455	CWC15	100	49.259	Nomascus_leucogenys
FBgn0040235	c12.1	100	48.162	ENSOPRG00000001706	-	100	49.814	Ochotona_princeps
FBgn0040235	c12.1	100	47.985	ENSODEG00000020310	-	100	48.148	Octodon_degus
FBgn0040235	c12.1	100	41.065	ENSODEG00000009713	-	100	40.684	Octodon_degus
FBgn0040235	c12.1	100	49.084	ENSODEG00000014060	-	100	49.259	Octodon_degus
FBgn0040235	c12.1	100	45.627	ENSODEG00000002251	-	100	47.148	Octodon_degus
FBgn0040235	c12.1	100	40.293	ENSODEG00000008155	-	100	40.909	Octodon_degus
FBgn0040235	c12.1	100	48.689	ENSOANG00000001673	-	100	45.489	Ornithorhynchus_anatinus
FBgn0040235	c12.1	100	49.818	ENSOANG00000010404	-	100	52.632	Ornithorhynchus_anatinus
FBgn0040235	c12.1	100	49.084	ENSOCUG00000001629	CWC15	100	49.259	Oryctolagus_cuniculus
FBgn0040235	c12.1	100	49.248	ENSORLG00000008550	cwc15	85	51.128	Oryzias_latipes
FBgn0040235	c12.1	100	49.811	ENSORLG00020002475	cwc15	85	51.698	Oryzias_latipes_hni
FBgn0040235	c12.1	100	49.621	ENSORLG00015007291	cwc15	85	51.515	Oryzias_latipes_hsok
FBgn0040235	c12.1	100	50.382	ENSOMEG00000000650	cwc15	100	52.273	Oryzias_melastigma
FBgn0040235	c12.1	100	49.084	ENSOGAG00000001686	CWC15	100	49.259	Otolemur_garnettii
FBgn0040235	c12.1	100	47.636	ENSOARG00000009316	-	100	49.632	Ovis_aries
FBgn0040235	c12.1	92	38.912	ENSOARG00000016298	-	99	40.417	Ovis_aries
FBgn0040235	c12.1	100	49.084	ENSPPAG00000033609	CWC15	100	49.259	Pan_paniscus
FBgn0040235	c12.1	100	47.547	ENSPPRG00000015290	-	100	47.426	Panthera_pardus
FBgn0040235	c12.1	100	49.451	ENSPPRG00000005063	-	100	50.000	Panthera_pardus
FBgn0040235	c12.1	65	76.271	ENSPTIG00000021149	-	76	76.271	Panthera_tigris_altaica
FBgn0040235	c12.1	100	49.084	ENSPTRG00000044239	CWC15	100	49.259	Pan_troglodytes
FBgn0040235	c12.1	100	49.084	ENSPANG00000019125	CWC15	100	49.259	Papio_anubis
FBgn0040235	c12.1	100	49.270	ENSPSIG00000011569	CWC15	100	50.185	Pelodiscus_sinensis
FBgn0040235	c12.1	100	49.084	ENSPEMG00000021432	Cwc15	100	49.259	Peromyscus_maniculatus_bairdii
FBgn0040235	c12.1	61	52.121	ENSPMAG00000007890	cwc15	86	53.571	Petromyzon_marinus
FBgn0040235	c12.1	100	48.364	ENSPCIG00000001348	CWC15	100	49.275	Phascolarctos_cinereus
FBgn0040235	c12.1	100	49.084	ENSPPYG00000003785	CWC15	100	49.259	Pongo_abelii
FBgn0040235	c12.1	59	83.721	ENSPCAG00000004205	CWC15	75	83.721	Procavia_capensis
FBgn0040235	c12.1	100	49.084	ENSPCOG00000023913	CWC15	100	49.259	Propithecus_coquereli
FBgn0040235	c12.1	100	47.636	ENSPVAG00000017517	CWC15	100	49.632	Pteropus_vampyrus
FBgn0040235	c12.1	100	45.848	ENSRNOG00000025157	AABR07008904.1	100	45.985	Rattus_norvegicus
FBgn0040235	c12.1	100	49.084	ENSRNOG00000008490	Cwc15	100	49.259	Rattus_norvegicus
FBgn0040235	c12.1	100	49.084	ENSRBIG00000030781	CWC15	100	49.259	Rhinopithecus_bieti
FBgn0040235	c12.1	100	49.084	ENSRROG00000037199	CWC15	100	49.259	Rhinopithecus_roxellana
FBgn0040235	c12.1	100	49.084	ENSSBOG00000006158	-	100	49.259	Saimiri_boliviensis_boliviensis
FBgn0040235	c12.1	99	38.077	ENSSBOG00000033926	-	99	39.464	Saimiri_boliviensis_boliviensis
FBgn0040235	c12.1	100	38.662	ENSSBOG00000035727	-	100	37.838	Saimiri_boliviensis_boliviensis
FBgn0040235	c12.1	100	51.527	ENSSHAG00000000335	-	100	49.618	Sarcophilus_harrisii
FBgn0040235	c12.1	100	48.708	ENSSHAG00000016534	-	100	49.265	Sarcophilus_harrisii
FBgn0040235	c12.1	93	44.309	ENSSPUG00000004441	CWC15	99	44.939	Sphenodon_punctatus
FBgn0040235	c12.1	100	47.826	ENSSSCG00000014961	CWC15	100	49.632	Sus_scrofa
FBgn0040235	c12.1	100	50.000	ENSTGUG00000012817	CWC15	100	49.446	Taeniopygia_guttata
FBgn0040235	c12.1	100	48.092	ENSTRUG00000015508	cwc15	100	51.527	Takifugu_rubripes
FBgn0040235	c12.1	100	52.060	ENSTNIG00000011790	cwc15	100	51.301	Tetraodon_nigroviridis
FBgn0040235	c12.1	54	69.492	ENSTBEG00000014319	CWC15	61	69.492	Tupaia_belangeri
FBgn0040235	c12.1	100	42.491	ENSTTRG00000004922	CWC15	100	42.222	Tursiops_truncatus
FBgn0040235	c12.1	100	48.905	ENSUAMG00000026040	CWC15	100	49.815	Ursus_americanus
FBgn0040235	c12.1	100	47.636	ENSUMAG00000007161	CWC15	100	49.632	Ursus_maritimus
FBgn0040235	c12.1	100	48.000	ENSVPAG00000005841	CWC15	100	50.189	Vicugna_pacos
FBgn0040235	c12.1	100	52.830	ENSVVUG00000012624	-	100	49.265	Vulpes_vulpes
FBgn0040235	c12.1	100	48.540	ENSVVUG00000011648	-	100	49.084	Vulpes_vulpes
FBgn0040235	c12.1	100	53.480	ENSXETG00000007076	cwc15	100	54.167	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISS	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0005634	nucleus	-	ISS	Component
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component