EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0040366 (Gene tree)
Gene ID: 31070
Gene Symbol: CG11398
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 3168 bases
Position: chrX:1211989-1215156
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070240	zf-C2H2	PF00096.26	3.9e-12	1	1
FBpp0311628	zf-C2H2	PF00096.26	3.9e-12	1	1
FBpp0070240	zf-met	PF12874.7	3.7e-06	1	1
FBpp0311628	zf-met	PF12874.7	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0345522	-	3018	-	FBpp0311628	329 (aa)	-	Q9V3X8
FBtr0070250	-	1487	-	FBpp0070240	329 (aa)	-	Q9V3X8

Gene Model

Click here to download FBgn0040366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0040366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0040366	CG11398	63	31.461	FBgn0033934	CG17385	59	31.461

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0040366	CG11398	60	33.588	ENSAPEG00000019755	-	50	33.588	Amphiprion_percula
FBgn0040366	CG11398	70	31.469	ENSCSAVG00000009574	-	100	31.469	Ciona_savignyi
FBgn0040366	CG11398	72	30.303	ENSFHEG00000013644	-	85	30.978	Fundulus_heteroclitus
FBgn0040366	CG11398	52	35.938	ENSLBEG00000026573	-	52	35.938	Labrus_bergylta
FBgn0040366	CG11398	50	30.189	ENSONIG00000009894	-	67	30.189	Oreochromis_niloticus
FBgn0040366	CG11398	75	30.493	ENSONIG00000016416	-	89	30.493	Oreochromis_niloticus
FBgn0040366	CG11398	64	34.066	ENSONIG00000003471	-	95	34.066	Oreochromis_niloticus
FBgn0040366	CG11398	71	31.304	ENSOMEG00000017673	-	61	31.304	Oryzias_melastigma
FBgn0040366	CG11398	61	30.380	ENSPMGG00000010563	-	70	30.380	Periophthalmus_magnuspinnatus
FBgn0040366	CG11398	65	34.783	ENSPMGG00000000243	-	78	32.716	Periophthalmus_magnuspinnatus
FBgn0040366	CG11398	77	30.488	ENSPMGG00000010664	-	88	30.488	Periophthalmus_magnuspinnatus
FBgn0040366	CG11398	73	30.000	ENSPMGG00000000458	-	85	30.000	Periophthalmus_magnuspinnatus
FBgn0040366	CG11398	65	32.121	ENSPFOG00000002879	-	100	32.121	Poecilia_formosa
FBgn0040366	CG11398	60	32.298	ENSPFOG00000020691	-	81	33.333	Poecilia_formosa
FBgn0040366	CG11398	62	35.514	ENSPREG00000016204	-	60	35.514	Poecilia_reticulata
FBgn0040366	CG11398	76	31.250	ENSSDUG00000000946	-	84	32.530	Seriola_dumerili

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISS	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISS	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0048813	dendrite morphogenesis	23977298.	IMP	Process