EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0041186 (Gene tree)
Gene ID: 43448
Gene Symbol: Slbp
Alias: -
Full Name: Stem-loop binding protein
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1193 bases
Position: chr3R:29152074-29153266
Accession: FBgn0041186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0084778	SLBP_RNA_bind	PF15247.6	7.7e-29	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0085409	-	1132	-	FBpp0084778	276 (aa)	-	Q9VAN6

Gene Model

Click here to download FBgn0041186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0041186's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005515	protein binding	19450530.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	11157774.14999087.	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	11157774.14999087.	IDA	Component
GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage	21873635.	IBA	Process
GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage	12192062.	IDA	Process
GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage	11157774.14999087.16495235.18042462.19450530.	IMP	Process
GO:0007076	mitotic chromosome condensation	11157774.	IMP	Process
GO:0035613	RNA stem-loop binding	11157774.16492733.	IDA	Function
GO:0051028	mRNA transport	21873635.	IBA	Process
GO:0071204	histone pre-mRNA 3'end processing complex	21873635.	IBA	Component
GO:0071207	histone pre-mRNA stem-loop binding	21873635.	IBA	Function