EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0042177 (Gene tree)
Gene ID: 59215
Gene Symbol: CG32164
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 5094 bases
Position: chr3L:16603053-16608146
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0075073	IBN_N	PF03810.19	1.2e-07	1	1
FBpp0303949	IBN_N	PF03810.19	1.2e-07	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0075313	-	3691	-	FBpp0075073	1079 (aa)	-	B5RIL6
FBtr0331559	-	3694	-	FBpp0303949	1080 (aa)	-	M9PFR8

Gene Model

Click here to download FBgn0042177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0042177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0042177	CG32164	100	97.778	FBgn0042178	CG32165	100	97.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0042177	CG32164	97	30.475	ENSAPOG00000019018	ipo4	96	31.198	Acanthochromis_polyacanthus
FBgn0042177	CG32164	94	30.381	ENSACIG00000004246	ipo4	94	30.755	Amphilophus_citrinellus
FBgn0042177	CG32164	97	31.031	ENSAOCG00000004773	ipo4	97	31.256	Amphiprion_ocellaris
FBgn0042177	CG32164	97	31.031	ENSAPEG00000002112	ipo4	97	31.256	Amphiprion_percula
FBgn0042177	CG32164	89	30.815	ENSATEG00000017082	ipo4	96	31.138	Anabas_testudineus
FBgn0042177	CG32164	93	30.221	ENSACLG00000019742	ipo4	95	30.703	Astatotilapia_calliptera
FBgn0042177	CG32164	92	30.244	ENSCHIG00000009413	IPO4	90	30.644	Capra_hircus
FBgn0042177	CG32164	97	30.334	ENSCSEG00000009606	ipo4	96	30.798	Cynoglossus_semilaevis
FBgn0042177	CG32164	97	30.663	ENSDARG00000041493	ipo4	97	30.663	Danio_rerio
FBgn0042177	CG32164	94	30.067	ENSECAG00000009909	IPO4	93	30.326	Equus_caballus
FBgn0042177	CG32164	97	30.487	ENSELUG00000020628	ipo4	97	30.917	Esox_lucius
FBgn0042177	CG32164	83	32.196	ENSFHEG00000009351	ipo4	92	32.396	Fundulus_heteroclitus
FBgn0042177	CG32164	97	30.175	ENSGMOG00000001801	ipo4	96	30.175	Gadus_morhua
FBgn0042177	CG32164	96	30.826	ENSGAFG00000005601	ipo4	97	30.691	Gambusia_affinis
FBgn0042177	CG32164	97	31.047	ENSGACG00000002276	ipo4	96	31.163	Gasterosteus_aculeatus
FBgn0042177	CG32164	93	30.318	ENSHBUG00000023269	ipo4	94	30.799	Haplochromis_burtoni
FBgn0042177	CG32164	98	31.006	ENSIPUG00000001185	ipo4	97	31.346	Ictalurus_punctatus
FBgn0042177	CG32164	97	30.256	ENSKMAG00000004627	ipo4	96	30.627	Kryptolebias_marmoratus
FBgn0042177	CG32164	93	30.518	ENSLBEG00000024952	ipo4	93	30.414	Labrus_bergylta
FBgn0042177	CG32164	93	30.414	ENSMZEG00005017273	ipo4	94	30.895	Maylandia_zebra
FBgn0042177	CG32164	92	30.397	ENSMMOG00000005264	ipo4	92	30.904	Mola_mola
FBgn0042177	CG32164	94	30.318	ENSMPUG00000005916	IPO4	93	30.991	Mustela_putorius_furo
FBgn0042177	CG32164	98	30.515	ENSNBRG00000005870	ipo4	97	30.663	Neolamprologus_brichardi
FBgn0042177	CG32164	97	30.712	ENSONIG00000014574	ipo4	97	30.946	Oreochromis_niloticus
FBgn0042177	CG32164	96	30.612	ENSORLG00000006457	ipo4	99	31.047	Oryzias_latipes
FBgn0042177	CG32164	97	30.897	ENSORLG00020004286	ipo4	97	31.152	Oryzias_latipes_hni
FBgn0042177	CG32164	97	31.082	ENSORLG00015021856	ipo4	96	31.227	Oryzias_latipes_hsok
FBgn0042177	CG32164	98	30.083	ENSOMEG00000016203	ipo4	97	30.550	Oryzias_melastigma
FBgn0042177	CG32164	94	30.029	ENSPCIG00000010718	IPO4	96	30.318	Phascolarctos_cinereus
FBgn0042177	CG32164	97	30.119	ENSPFOG00000009255	ipo4	97	30.194	Poecilia_formosa
FBgn0042177	CG32164	97	30.230	ENSPLAG00000020556	ipo4	97	30.286	Poecilia_latipinna
FBgn0042177	CG32164	97	30.119	ENSPMEG00000013102	ipo4	97	30.194	Poecilia_mexicana
FBgn0042177	CG32164	98	31.279	ENSPNAG00000027964	ipo4	97	31.680	Pygocentrus_nattereri
FBgn0042177	CG32164	99	30.741	ENSSFOG00015012267	ipo4	98	31.034	Scleropages_formosus
FBgn0042177	CG32164	97	30.512	ENSSFOG00015014437	IPO4	96	30.677	Scleropages_formosus
FBgn0042177	CG32164	96	31.105	ENSSMAG00000019912	ipo4	97	31.273	Scophthalmus_maximus
FBgn0042177	CG32164	85	32.334	ENSSDUG00000017513	ipo4	97	30.535	Seriola_dumerili
FBgn0042177	CG32164	70	30.076	ENSSARG00000010701	IPO4	71	30.584	Sorex_araneus
FBgn0042177	CG32164	97	30.548	ENSSPAG00000008486	ipo4	96	31.204	Stegastes_partitus
FBgn0042177	CG32164	96	30.112	ENSXCOG00000005208	ipo4	96	30.000	Xiphophorus_couchianus
FBgn0042177	CG32164	96	30.204	ENSXMAG00000006041	ipo4	97	30.166	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006607	NLS-bearing protein import into nucleus	21873635.	IBA	Process
GO:0006610	ribosomal protein import into nucleus	21873635.	IBA	Process
GO:0008139	nuclear localization sequence binding	21873635.	IBA	Function
GO:0008536	Ran GTPase binding	-	IEA	Function
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0031965	nuclear membrane	21873635.	IBA	Component
GO:0034399	nuclear periphery	21873635.	IBA	Component