EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0042178 (Gene tree)
Gene ID: 59216
Gene Symbol: CG32165
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 5279 bases
Position: chr3L:16595181-16600459
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0303948	IBN_N	PF03810.19	1.3e-07	1	1
FBpp0311522	IBN_N	PF03810.19	1.3e-07	1	1
FBpp0075072	IBN_N	PF03810.19	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0345368	-	3825	-	FBpp0311522	1059 (aa)	-	M9PFW8
FBtr0075312	-	3649	-	FBpp0075072	1080 (aa)	-	M9PFW8
FBtr0331558	-	3586	-	FBpp0303948	1059 (aa)	-	M9PFW8

Gene Model

Click here to download FBgn0042178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0042178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0042178	CG32165	100	97.778	FBgn0042177	CG32164	100	97.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0042178	CG32165	97	30.180	ENSAPOG00000019018	ipo4	96	30.892	Acanthochromis_polyacanthus
FBgn0042178	CG32165	97	30.741	ENSAOCG00000004773	ipo4	97	30.862	Amphiprion_ocellaris
FBgn0042178	CG32165	97	30.741	ENSAPEG00000002112	ipo4	97	30.862	Amphiprion_percula
FBgn0042178	CG32165	92	30.020	ENSCAFG00000012049	IPO4	93	30.039	Canis_familiaris
FBgn0042178	CG32165	92	30.156	ENSCHIG00000009413	IPO4	90	30.393	Capra_hircus
FBgn0042178	CG32165	97	30.712	ENSDARG00000041493	ipo4	97	30.447	Danio_rerio
FBgn0042178	CG32165	94	30.230	ENSECAG00000009909	IPO4	93	30.393	Equus_caballus
FBgn0042178	CG32165	97	30.156	ENSELUG00000020628	ipo4	97	30.435	Esox_lucius
FBgn0042178	CG32165	83	31.421	ENSFHEG00000009351	ipo4	92	31.544	Fundulus_heteroclitus
FBgn0042178	CG32165	98	30.126	ENSGAFG00000005601	ipo4	98	30.081	Gambusia_affinis
FBgn0042178	CG32165	97	31.204	ENSGACG00000002276	ipo4	96	31.447	Gasterosteus_aculeatus
FBgn0042178	CG32165	98	30.423	ENSIPUG00000001185	ipo4	97	30.996	Ictalurus_punctatus
FBgn0042178	CG32165	93	30.116	ENSLBEG00000024952	ipo4	93	30.397	Labrus_bergylta
FBgn0042178	CG32165	92	30.333	ENSMMOG00000005264	ipo4	93	30.523	Mola_mola
FBgn0042178	CG32165	94	30.359	ENSMPUG00000005916	IPO4	93	31.038	Mustela_putorius_furo
FBgn0042178	CG32165	98	30.314	ENSNBRG00000005870	ipo4	97	30.314	Neolamprologus_brichardi
FBgn0042178	CG32165	97	30.483	ENSONIG00000014574	ipo4	97	30.591	Oreochromis_niloticus
FBgn0042178	CG32165	97	31.226	ENSORLG00000006457	ipo4	99	30.805	Oryzias_latipes
FBgn0042178	CG32165	97	31.132	ENSORLG00020004286	ipo4	97	30.897	Oryzias_latipes_hni
FBgn0042178	CG32165	97	31.321	ENSORLG00015021856	ipo4	97	30.961	Oryzias_latipes_hsok
FBgn0042178	CG32165	98	30.092	ENSOMEG00000016203	ipo4	97	30.311	Oryzias_melastigma
FBgn0042178	CG32165	90	30.297	ENSPMGG00000020871	ipo4	96	30.324	Periophthalmus_magnuspinnatus
FBgn0042178	CG32165	97	30.211	ENSPFOG00000009255	ipo4	97	30.571	Poecilia_formosa
FBgn0042178	CG32165	97	30.157	ENSPLAG00000020556	ipo4	97	30.499	Poecilia_latipinna
FBgn0042178	CG32165	97	30.230	ENSPMEG00000013102	ipo4	97	30.571	Poecilia_mexicana
FBgn0042178	CG32165	97	31.151	ENSPNAG00000027964	ipo4	97	31.495	Pygocentrus_nattereri
FBgn0042178	CG32165	99	31.085	ENSSFOG00015012267	ipo4	98	31.416	Scleropages_formosus
FBgn0042178	CG32165	97	30.605	ENSSFOG00015014437	IPO4	96	30.862	Scleropages_formosus
FBgn0042178	CG32165	96	30.762	ENSSMAG00000019912	ipo4	97	30.876	Scophthalmus_maximus
FBgn0042178	CG32165	85	32.161	ENSSDUG00000017513	ipo4	97	30.563	Seriola_dumerili
FBgn0042178	CG32165	68	30.458	ENSSARG00000010701	IPO4	71	30.418	Sorex_araneus
FBgn0042178	CG32165	97	30.317	ENSSPAG00000008486	ipo4	96	30.633	Stegastes_partitus
FBgn0042178	CG32165	96	30.639	ENSXCOG00000005208	ipo4	96	30.776	Xiphophorus_couchianus
FBgn0042178	CG32165	96	30.504	ENSXMAG00000006041	ipo4	97	30.455	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006607	NLS-bearing protein import into nucleus	21873635.	IBA	Process
GO:0006610	ribosomal protein import into nucleus	21873635.	IBA	Process
GO:0008139	nuclear localization sequence binding	21873635.	IBA	Function
GO:0008536	Ran GTPase binding	-	IEA	Function
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0031965	nuclear membrane	21873635.	IBA	Component
GO:0034399	nuclear periphery	21873635.	IBA	Component