EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0042182 (Gene tree)
Gene ID: 3771984
Gene Symbol: CG18749
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 4000 bases
Position: chr3R:8244055-8248054
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0099996	2OG-FeII_Oxy	PF03171.20	2.6e-05	1	1
FBpp0311483	2OG-FeII_Oxy	PF03171.20	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0100545	-	3404	-	FBpp0099996	491 (aa)	-	Q8MSK0
FBtr0345323	-	3544	-	FBpp0311483	491 (aa)	-	Q8MSK0

Gene Model

Click here to download FBgn0042182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0042182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0042182	CG18749	95	32.370	FBgn0036795	CG18233	97	32.370
FBgn0042182	CG18749	92	36.546	FBgn0051015	PH4alphaPV	94	36.546
FBgn0042182	CG18749	97	33.208	FBgn0051016	CG31016	96	33.208
FBgn0042182	CG18749	92	34.118	FBgn0051013	CG31013	94	34.118
FBgn0042182	CG18749	94	32.554	FBgn0052201	CG32201	96	32.554
FBgn0042182	CG18749	100	90.224	FBgn0040528	CG15864	100	90.224

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004656	procollagen-proline 4-dioxygenase activity	21873635.	IBA	Function
GO:0005506	iron ion binding	-	IEA	Function
GO:0005576	extracellular region	21672851.	ISM	Component
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	-	IEA	Function
GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	21873635.	IBA	Process
GO:0031418	L-ascorbic acid binding	-	IEA	Function
GO:0032504	multicellular organism reproduction	21672851.	IEP	Process
GO:0055114	oxidation-reduction process	-	IEA	Process