EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0042712 (Gene tree)
Gene ID: 117365
Gene Symbol: HBS1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2360 bases
Position: chr3L:1862881-1865240
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0072745	GTP_EFTU	PF00009.27	7.8e-46	1	1
FBpp0311793	GTP_EFTU	PF00009.27	7.8e-46	1	1
FBpp0072745	GTP_EFTU_D2	PF03144.25	1.8e-07	1	1
FBpp0311793	GTP_EFTU_D2	PF03144.25	1.8e-07	1	1
FBpp0072745	GTP_EFTU_D3	PF03143.17	1.9e-21	1	1
FBpp0311793	GTP_EFTU_D3	PF03143.17	1.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0345807	-	2360	-	FBpp0311793	670 (aa)	-	Q86NR4
FBtr0072866	-	2259	-	FBpp0072745	670 (aa)	-	Q9W074

Gene Model

Click here to download FBgn0042712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0042712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0042712	HBS1	64	37.330	FBgn0000557	eEF1alpha2	95	37.330
FBgn0042712	HBS1	64	37.788	FBgn0020443	eRF3	93	36.887
FBgn0042712	HBS1	64	36.878	FBgn0284245	eEF1alpha1	95	36.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0042712	HBS1	100	48.080	ENSG00000112339	HBS1L	97	55.138	Homo_sapiens
FBgn0042712	HBS1	93	46.105	ENSAPOG00000013169	hbs1l	98	45.886	Acanthochromis_polyacanthus
FBgn0042712	HBS1	99	46.933	ENSAMEG00000009749	HBS1L	99	46.505	Ailuropoda_melanoleuca
FBgn0042712	HBS1	82	52.050	ENSACIG00000017087	hbs1l	96	52.050	Amphilophus_citrinellus
FBgn0042712	HBS1	100	46.592	ENSAPEG00000008320	hbs1l	99	45.994	Amphiprion_percula
FBgn0042712	HBS1	100	47.043	ENSATEG00000004459	hbs1l	99	46.217	Anabas_testudineus
FBgn0042712	HBS1	97	45.468	ENSAPLG00000007791	HBS1L	99	45.036	Anas_platyrhynchos
FBgn0042712	HBS1	100	46.667	ENSACAG00000010120	HBS1L	99	46.099	Anolis_carolinensis
FBgn0042712	HBS1	100	47.443	ENSANAG00000038076	HBS1L	99	49.421	Aotus_nancymaae
FBgn0042712	HBS1	100	47.149	ENSACLG00000010469	hbs1l	99	46.518	Astatotilapia_calliptera
FBgn0042712	HBS1	100	47.795	ENSAMXG00000004260	hbs1l	99	46.901	Astyanax_mexicanus
FBgn0042712	HBS1	100	47.653	ENSBTAG00000020174	HBS1L	99	46.942	Bos_taurus
FBgn0042712	HBS1	76	43.238	WBGene00010622	K07A12.4	85	43.238	Caenorhabditis_elegans
FBgn0042712	HBS1	100	47.443	ENSCJAG00000007678	HBS1L	98	49.421	Callithrix_jacchus
FBgn0042712	HBS1	100	46.942	ENSCAFG00000000226	HBS1L	99	46.515	Canis_familiaris
FBgn0042712	HBS1	100	46.942	ENSCAFG00020021904	HBS1L	99	46.515	Canis_lupus_dingo
FBgn0042712	HBS1	100	47.226	ENSCHIG00000010299	HBS1L	99	47.198	Capra_hircus
FBgn0042712	HBS1	98	51.220	ENSTSYG00000007089	HBS1L	99	51.220	Carlito_syrichta
FBgn0042712	HBS1	99	41.983	ENSCPOG00000007015	HBS1L	99	41.460	Cavia_porcellus
FBgn0042712	HBS1	99	47.863	ENSCCAG00000033863	HBS1L	99	49.666	Cebus_capucinus
FBgn0042712	HBS1	100	47.937	ENSCATG00000043042	HBS1L	99	47.368	Cercocebus_atys
FBgn0042712	HBS1	100	47.092	ENSCLAG00000004937	HBS1L	99	46.449	Chinchilla_lanigera
FBgn0042712	HBS1	99	47.932	ENSCSAG00000016791	HBS1L	99	47.361	Chlorocebus_sabaeus
FBgn0042712	HBS1	54	51.811	ENSCHOG00000001852	HBS1L	55	51.811	Choloepus_hoffmanni
FBgn0042712	HBS1	100	47.391	ENSCPBG00000017635	HBS1L	99	46.620	Chrysemys_picta_bellii
FBgn0042712	HBS1	99	43.715	ENSCING00000005592	-	99	43.811	Ciona_intestinalis
FBgn0042712	HBS1	99	45.401	ENSCSAVG00000002297	-	99	51.111	Ciona_savignyi
FBgn0042712	HBS1	100	47.511	ENSCANG00000031208	HBS1L	99	47.084	Colobus_angolensis_palliatus
FBgn0042712	HBS1	100	46.667	ENSCGRG00001024531	Hbs1l	99	46.667	Cricetulus_griseus_chok1gshd
FBgn0042712	HBS1	100	46.667	ENSCGRG00000017361	Hbs1l	99	46.667	Cricetulus_griseus_crigri
FBgn0042712	HBS1	98	51.220	ENSCSEG00000002794	hbs1l	94	53.846	Cynoglossus_semilaevis
FBgn0042712	HBS1	100	47.010	ENSCVAG00000001462	hbs1l	99	46.473	Cyprinodon_variegatus
FBgn0042712	HBS1	100	47.109	ENSDARG00000036778	hbs1l	99	47.067	Danio_rerio
FBgn0042712	HBS1	100	47.783	ENSDORG00000005958	Hbs1l	99	47.639	Dipodomys_ordii
FBgn0042712	HBS1	100	43.243	ENSETEG00000000913	HBS1L	99	42.959	Echinops_telfairi
FBgn0042712	HBS1	100	45.970	ENSEBUG00000010759	hbs1l	100	49.254	Eptatretus_burgeri
FBgn0042712	HBS1	100	46.809	ENSEASG00005011148	HBS1L	99	46.393	Equus_asinus_asinus
FBgn0042712	HBS1	100	46.809	ENSECAG00000004470	HBS1L	99	48.849	Equus_caballus
FBgn0042712	HBS1	100	45.403	ENSEEUG00000013582	HBS1L	92	48.336	Erinaceus_europaeus
FBgn0042712	HBS1	71	50.203	ENSELUG00000006444	hbs1l	99	43.252	Esox_lucius
FBgn0042712	HBS1	100	47.398	ENSFCAG00000001810	HBS1L	99	49.186	Felis_catus
FBgn0042712	HBS1	84	48.093	ENSFALG00000011898	HBS1L	99	48.093	Ficedula_albicollis
FBgn0042712	HBS1	100	46.023	ENSFDAG00000011841	HBS1L	99	45.881	Fukomys_damarensis
FBgn0042712	HBS1	100	46.537	ENSFHEG00000006942	hbs1l	99	46.335	Fundulus_heteroclitus
FBgn0042712	HBS1	99	47.585	ENSGMOG00000011843	hbs1l	99	46.818	Gadus_morhua
FBgn0042712	HBS1	100	46.262	ENSGALG00000013962	HBS1L	99	45.288	Gallus_gallus
FBgn0042712	HBS1	100	47.288	ENSGAFG00000004157	hbs1l	99	46.888	Gambusia_affinis
FBgn0042712	HBS1	100	46.165	ENSGACG00000011035	hbs1l	100	46.023	Gasterosteus_aculeatus
FBgn0042712	HBS1	100	47.159	ENSGAGG00000002033	HBS1L	99	46.525	Gopherus_agassizii
FBgn0042712	HBS1	78	49.908	ENSGGOG00000034956	-	97	49.908	Gorilla_gorilla
FBgn0042712	HBS1	100	47.125	ENSHBUG00000013424	hbs1l	99	46.489	Haplochromis_burtoni
FBgn0042712	HBS1	100	47.151	ENSHGLG00000000516	HBS1L	99	46.724	Heterocephalus_glaber_female
FBgn0042712	HBS1	100	47.151	ENSHGLG00100003550	HBS1L	99	46.724	Heterocephalus_glaber_male
FBgn0042712	HBS1	100	47.257	ENSHCOG00000007581	hbs1l	93	46.369	Hippocampus_comes
FBgn0042712	HBS1	100	47.445	ENSIPUG00000010748	hbs1l	99	47.110	Ictalurus_punctatus
FBgn0042712	HBS1	100	47.234	ENSSTOG00000007551	HBS1L	99	46.667	Ictidomys_tridecemlineatus
FBgn0042712	HBS1	99	47.092	ENSJJAG00000017024	-	97	46.742	Jaculus_jaculus
FBgn0042712	HBS1	100	37.834	ENSJJAG00000012660	-	99	37.553	Jaculus_jaculus
FBgn0042712	HBS1	100	46.722	ENSKMAG00000012130	hbs1l	99	46.648	Kryptolebias_marmoratus
FBgn0042712	HBS1	100	47.214	ENSLBEG00000002784	hbs1l	99	46.741	Labrus_bergylta
FBgn0042712	HBS1	57	58.115	ENSLACG00000004528	HBS1L	78	58.115	Latimeria_chalumnae
FBgn0042712	HBS1	100	51.885	ENSLOCG00000016221	hbs1l	99	45.913	Lepisosteus_oculatus
FBgn0042712	HBS1	100	45.892	ENSLAFG00000007835	HBS1L	100	45.881	Loxodonta_africana
FBgn0042712	HBS1	100	47.795	ENSMFAG00000003766	HBS1L	99	47.226	Macaca_fascicularis
FBgn0042712	HBS1	100	47.059	ENSMMUG00000004802	HBS1L	98	51.845	Macaca_mulatta
FBgn0042712	HBS1	100	47.795	ENSMNEG00000043942	HBS1L	99	47.226	Macaca_nemestrina
FBgn0042712	HBS1	99	47.932	ENSMLEG00000043218	HBS1L	98	47.361	Mandrillus_leucophaeus
FBgn0042712	HBS1	100	45.850	ENSMAMG00000016498	hbs1l	99	45.280	Mastacembelus_armatus
FBgn0042712	HBS1	76	54.023	ENSMZEG00005024018	-	87	54.023	Maylandia_zebra
FBgn0042712	HBS1	100	47.149	ENSMZEG00005015575	hbs1l	99	46.518	Maylandia_zebra
FBgn0042712	HBS1	99	46.571	ENSMGAG00000013065	HBS1L	98	45.506	Meleagris_gallopavo
FBgn0042712	HBS1	100	46.950	ENSMAUG00000001077	Hbs1l	99	46.950	Mesocricetus_auratus
FBgn0042712	HBS1	92	45.122	ENSMICG00000001533	-	95	47.841	Microcebus_murinus
FBgn0042712	HBS1	96	41.642	ENSMICG00000030043	-	95	49.457	Microcebus_murinus
FBgn0042712	HBS1	100	46.950	ENSMOCG00000023038	Hbs1l	99	46.950	Microtus_ochrogaster
FBgn0042712	HBS1	97	48.187	ENSMMOG00000015507	hbs1l	99	48.271	Mola_mola
FBgn0042712	HBS1	100	46.857	ENSMODG00000017499	HBS1L	99	46.286	Monodelphis_domestica
FBgn0042712	HBS1	100	46.547	ENSMALG00000010768	hbs1l	92	53.333	Monopterus_albus
FBgn0042712	HBS1	100	46.809	MGP_CAROLIEiJ_G0015162	Hbs1l	99	46.809	Mus_caroli
FBgn0042712	HBS1	100	46.809	ENSMUSG00000019977	Hbs1l	81	67.939	Mus_musculus
FBgn0042712	HBS1	100	46.383	MGP_PahariEiJ_G0023782	Hbs1l	99	46.383	Mus_pahari
FBgn0042712	HBS1	100	46.809	MGP_SPRETEiJ_G0015970	Hbs1l	99	46.809	Mus_spretus
FBgn0042712	HBS1	100	47.368	ENSMPUG00000014810	HBS1L	99	46.799	Mustela_putorius_furo
FBgn0042712	HBS1	100	47.234	ENSMLUG00000010618	HBS1L	99	46.950	Myotis_lucifugus
FBgn0042712	HBS1	100	47.301	ENSNGAG00000015184	Hbs1l	99	46.657	Nannospalax_galili
FBgn0042712	HBS1	100	46.985	ENSNBRG00000020095	hbs1l	94	52.612	Neolamprologus_brichardi
FBgn0042712	HBS1	100	48.080	ENSNLEG00000014721	HBS1L	99	47.226	Nomascus_leucogenys
FBgn0042712	HBS1	81	48.731	ENSMEUG00000003907	HBS1L	73	48.731	Notamacropus_eugenii
FBgn0042712	HBS1	78	59.167	ENSOPRG00000013595	HBS1L	69	59.167	Ochotona_princeps
FBgn0042712	HBS1	99	46.439	ENSODEG00000008959	HBS1L	99	46.790	Octodon_degus
FBgn0042712	HBS1	100	46.704	ENSONIG00000000460	hbs1l	99	46.089	Oreochromis_niloticus
FBgn0042712	HBS1	100	46.772	ENSOANG00000002684	-	99	46.485	Ornithorhynchus_anatinus
FBgn0042712	HBS1	99	46.003	ENSOCUG00000011619	HBS1L	99	45.483	Oryctolagus_cuniculus
FBgn0042712	HBS1	100	46.281	ENSORLG00000016559	hbs1l	99	46.419	Oryzias_latipes
FBgn0042712	HBS1	100	46.556	ENSORLG00020003827	hbs1l	99	46.281	Oryzias_latipes_hni
FBgn0042712	HBS1	100	46.281	ENSORLG00015023105	hbs1l	99	46.101	Oryzias_latipes_hsok
FBgn0042712	HBS1	100	47.652	ENSOMEG00000016715	hbs1l	99	47.652	Oryzias_melastigma
FBgn0042712	HBS1	100	47.368	ENSOGAG00000012604	HBS1L	99	46.799	Otolemur_garnettii
FBgn0042712	HBS1	99	47.443	ENSOARG00000014798	-	99	46.733	Ovis_aries
FBgn0042712	HBS1	100	47.234	ENSOARG00000005671	-	99	46.525	Ovis_aries
FBgn0042712	HBS1	100	47.937	ENSPPAG00000029900	HBS1L	99	47.368	Pan_paniscus
FBgn0042712	HBS1	100	47.398	ENSPPRG00000005285	HBS1L	99	49.186	Panthera_pardus
FBgn0042712	HBS1	100	47.250	ENSPTIG00000015803	HBS1L	99	49.020	Panthera_tigris_altaica
FBgn0042712	HBS1	100	47.937	ENSPTRG00000018630	HBS1L	99	47.368	Pan_troglodytes
FBgn0042712	HBS1	100	47.795	ENSPANG00000007075	HBS1L	99	47.226	Papio_anubis
FBgn0042712	HBS1	99	50.980	ENSPKIG00000023171	hbs1l	99	47.316	Paramormyrops_kingsleyae
FBgn0042712	HBS1	85	45.499	ENSPSIG00000016467	HBS1L	96	45.425	Pelodiscus_sinensis
FBgn0042712	HBS1	99	47.953	ENSPMGG00000018051	hbs1l	100	47.674	Periophthalmus_magnuspinnatus
FBgn0042712	HBS1	100	47.660	ENSPEMG00000014369	Hbs1l	99	47.660	Peromyscus_maniculatus_bairdii
FBgn0042712	HBS1	100	46.648	ENSPMAG00000002516	hbs1l	99	46.045	Petromyzon_marinus
FBgn0042712	HBS1	100	46.953	ENSPFOG00000021764	hbs1l	99	46.556	Poecilia_formosa
FBgn0042712	HBS1	100	46.879	ENSPLAG00000006193	hbs1l	99	46.483	Poecilia_latipinna
FBgn0042712	HBS1	100	49.256	ENSPMEG00000000925	hbs1l	97	48.817	Poecilia_mexicana
FBgn0042712	HBS1	100	46.419	ENSPREG00000011270	hbs1l	99	46.027	Poecilia_reticulata
FBgn0042712	HBS1	100	48.148	ENSPPYG00000017027	HBS1L	99	47.578	Pongo_abelii
FBgn0042712	HBS1	74	54.241	ENSPCAG00000007002	HBS1L	74	54.241	Procavia_capensis
FBgn0042712	HBS1	74	52.174	ENSPVAG00000015229	HBS1L	76	52.174	Pteropus_vampyrus
FBgn0042712	HBS1	100	47.010	ENSPNYG00000013360	hbs1l	99	46.379	Pundamilia_nyererei
FBgn0042712	HBS1	100	46.479	ENSPNAG00000026721	hbs1l	99	46.414	Pygocentrus_nattereri
FBgn0042712	HBS1	100	46.901	ENSRNOG00000014531	Hbs1l	99	46.901	Rattus_norvegicus
FBgn0042712	HBS1	100	47.653	ENSRBIG00000004484	HBS1L	99	47.511	Rhinopithecus_bieti
FBgn0042712	HBS1	100	47.511	ENSRROG00000026176	HBS1L	99	47.368	Rhinopithecus_roxellana
FBgn0042712	HBS1	63	36.726	YKR084C	-	73	36.726	Saccharomyces_cerevisiae
FBgn0042712	HBS1	100	47.443	ENSSBOG00000019696	-	99	49.256	Saimiri_boliviensis_boliviensis
FBgn0042712	HBS1	100	42.373	ENSSBOG00000016930	-	98	45.213	Saimiri_boliviensis_boliviensis
FBgn0042712	HBS1	100	47.646	ENSSHAG00000013509	HBS1L	99	47.076	Sarcophilus_harrisii
FBgn0042712	HBS1	100	48.052	ENSSFOG00015017544	hbs1l	96	47.186	Scleropages_formosus
FBgn0042712	HBS1	100	46.143	ENSSMAG00000010621	hbs1l	99	45.682	Scophthalmus_maximus
FBgn0042712	HBS1	100	46.250	ENSSDUG00000012974	hbs1l	99	45.856	Seriola_dumerili
FBgn0042712	HBS1	100	46.250	ENSSLDG00000004960	hbs1l	94	51.371	Seriola_lalandi_dorsalis
FBgn0042712	HBS1	97	47.214	ENSSARG00000006747	HBS1L	99	46.921	Sorex_araneus
FBgn0042712	HBS1	99	48.148	ENSSPUG00000012389	HBS1L	99	47.151	Sphenodon_punctatus
FBgn0042712	HBS1	97	48.198	ENSSSCG00000004169	HBS1L	100	45.758	Sus_scrofa
FBgn0042712	HBS1	100	46.338	ENSTGUG00000011507	HBS1L	99	45.493	Taeniopygia_guttata
FBgn0042712	HBS1	100	47.191	ENSTRUG00000016128	hbs1l	99	47.083	Takifugu_rubripes
FBgn0042712	HBS1	99	47.226	ENSTNIG00000016320	hbs1l	99	47.511	Tetraodon_nigroviridis
FBgn0042712	HBS1	85	46.711	ENSTBEG00000009950	HBS1L	88	47.264	Tupaia_belangeri
FBgn0042712	HBS1	100	47.092	ENSTTRG00000003715	HBS1L	99	46.525	Tursiops_truncatus
FBgn0042712	HBS1	100	47.151	ENSUAMG00000001064	HBS1L	99	46.724	Ursus_americanus
FBgn0042712	HBS1	100	47.151	ENSUMAG00000024395	HBS1L	99	51.970	Ursus_maritimus
FBgn0042712	HBS1	76	52.345	ENSVPAG00000006280	HBS1L	83	52.345	Vicugna_pacos
FBgn0042712	HBS1	100	47.084	ENSVVUG00000000295	HBS1L	99	46.657	Vulpes_vulpes
FBgn0042712	HBS1	100	47.270	ENSXETG00000003726	hbs1l	99	47.557	Xenopus_tropicalis
FBgn0042712	HBS1	100	48.936	ENSXCOG00000005323	hbs1l	100	48.519	Xiphophorus_couchianus
FBgn0042712	HBS1	100	47.149	ENSXMAG00000004359	hbs1l	99	46.750	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005515	protein binding	26124316.	IPI	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0006412	translation	21873635.	IBA	Process
GO:0016441	posttranscriptional gene silencing	26124316.	IMP	Process
GO:0045089	positive regulation of innate immune response	19520911.	HMP	Process
GO:0050829	defense response to Gram-negative bacterium	19520911.	HMP	Process