EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0044510 (Gene tree)
Gene ID: 3355089
Gene Symbol: mRpS5
Alias: -
Full Name: mitochondrial ribosomal protein S5
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 6299 bases
Position: chr3L:24537236-24543534
Accession: FBgn0044510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0110438	Ribosomal_S5_C	PF03719.15	7.2e-22	1	1
FBpp0110439	Ribosomal_S5_C	PF03719.15	7.2e-22	1	1
FBpp0110438	Ribosomal_S5	PF00333.20	2.8e-15	1	1
FBpp0110439	Ribosomal_S5	PF00333.20	2.8e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0111144	-	479	-	FBpp0110436	47 (aa)	-	Q0E8A8
FBtr0111147	-	1422	-	FBpp0110439	407 (aa)	-	Q8SYP9
FBtr0111146	-	1379	-	FBpp0110438	407 (aa)	-	Q8SYP9

Gene Model

Click here to download FBgn0044510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0044510's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0044510	mRpS5	80	42.073	ENSG00000144029	MRPS5	73	42.073	Homo_sapiens
FBgn0044510	mRpS5	79	41.212	ENSAPOG00000006057	mrps5	79	41.212	Acanthochromis_polyacanthus
FBgn0044510	mRpS5	71	44.178	ENSAMEG00000009757	MRPS5	68	44.178	Ailuropoda_melanoleuca
FBgn0044510	mRpS5	71	41.724	ENSACIG00000011594	mrps5	70	41.724	Amphilophus_citrinellus
FBgn0044510	mRpS5	74	43.750	ENSAPEG00000000853	mrps5	78	42.857	Amphiprion_percula
FBgn0044510	mRpS5	76	44.127	ENSATEG00000012264	mrps5	78	44.127	Anabas_testudineus
FBgn0044510	mRpS5	74	43.092	ENSAPLG00000002557	MRPS5	85	41.824	Anas_platyrhynchos
FBgn0044510	mRpS5	70	47.059	ENSACAG00000000830	MRPS5	76	44.551	Anolis_carolinensis
FBgn0044510	mRpS5	71	44.521	ENSANAG00000030230	MRPS5	68	44.521	Aotus_nancymaae
FBgn0044510	mRpS5	74	40.199	ENSACLG00000025759	mrps5	72	40.199	Astatotilapia_calliptera
FBgn0044510	mRpS5	77	42.540	ENSAMXG00000033743	mrps5	79	43.653	Astyanax_mexicanus
FBgn0044510	mRpS5	71	43.836	ENSBTAG00000008241	MRPS5	68	43.836	Bos_taurus
FBgn0044510	mRpS5	89	33.506	WBGene00008452	mrps-5	87	33.506	Caenorhabditis_elegans
FBgn0044510	mRpS5	71	44.178	ENSCJAG00000018942	MRPS5	68	44.178	Callithrix_jacchus
FBgn0044510	mRpS5	71	44.521	ENSCAFG00000007040	MRPS5	68	44.521	Canis_familiaris
FBgn0044510	mRpS5	71	44.521	ENSCAFG00020019650	MRPS5	68	44.521	Canis_lupus_dingo
FBgn0044510	mRpS5	71	43.836	ENSCHIG00000020942	MRPS5	68	43.836	Capra_hircus
FBgn0044510	mRpS5	71	43.836	ENSTSYG00000001808	MRPS5	68	43.836	Carlito_syrichta
FBgn0044510	mRpS5	71	44.178	ENSCAPG00000016441	MRPS5	69	44.178	Cavia_aperea
FBgn0044510	mRpS5	71	44.178	ENSCPOG00000004405	MRPS5	68	44.178	Cavia_porcellus
FBgn0044510	mRpS5	71	44.178	ENSCCAG00000026269	MRPS5	68	44.178	Cebus_capucinus
FBgn0044510	mRpS5	71	44.863	ENSCATG00000031215	MRPS5	68	44.863	Cercocebus_atys
FBgn0044510	mRpS5	71	45.017	ENSCLAG00000006224	MRPS5	67	45.017	Chinchilla_lanigera
FBgn0044510	mRpS5	71	43.493	ENSCSAG00000017411	MRPS5	58	43.493	Chlorocebus_sabaeus
FBgn0044510	mRpS5	77	42.453	ENSCPBG00000018258	MRPS5	82	42.453	Chrysemys_picta_bellii
FBgn0044510	mRpS5	81	35.736	ENSCING00000005698	-	83	35.736	Ciona_intestinalis
FBgn0044510	mRpS5	71	44.178	ENSCANG00000042646	MRPS5	71	44.178	Colobus_angolensis_palliatus
FBgn0044510	mRpS5	76	37.299	ENSCANG00000042096	-	75	37.299	Colobus_angolensis_palliatus
FBgn0044510	mRpS5	71	45.734	ENSCGRG00001019558	Mrps5	68	45.734	Cricetulus_griseus_chok1gshd
FBgn0044510	mRpS5	71	45.734	ENSCGRG00000006508	Mrps5	68	45.734	Cricetulus_griseus_crigri
FBgn0044510	mRpS5	79	40.615	ENSCSEG00000000495	mrps5	79	40.615	Cynoglossus_semilaevis
FBgn0044510	mRpS5	68	37.500	ENSCVAG00000015403	mrps5	86	37.500	Cyprinodon_variegatus
FBgn0044510	mRpS5	74	42.105	ENSDARG00000062209	mrps5	76	42.105	Danio_rerio
FBgn0044510	mRpS5	66	46.520	ENSDNOG00000007247	MRPS5	63	46.520	Dasypus_novemcinctus
FBgn0044510	mRpS5	78	42.679	ENSDORG00000001493	Mrps5	74	42.679	Dipodomys_ordii
FBgn0044510	mRpS5	55	41.518	ENSETEG00000010834	MRPS5	52	41.518	Echinops_telfairi
FBgn0044510	mRpS5	71	44.521	ENSEASG00005005278	MRPS5	68	44.521	Equus_asinus_asinus
FBgn0044510	mRpS5	71	44.178	ENSECAG00000001234	MRPS5	68	44.178	Equus_caballus
FBgn0044510	mRpS5	78	35.714	ENSEEUG00000011502	MRPS5	73	35.714	Erinaceus_europaeus
FBgn0044510	mRpS5	75	44.156	ENSELUG00000003664	mrps5	76	44.156	Esox_lucius
FBgn0044510	mRpS5	71	45.205	ENSFCAG00000009358	MRPS5	58	45.205	Felis_catus
FBgn0044510	mRpS5	74	42.434	ENSFALG00000002327	MRPS5	79	41.121	Ficedula_albicollis
FBgn0044510	mRpS5	71	45.548	ENSFDAG00000004115	MRPS5	68	45.548	Fukomys_damarensis
FBgn0044510	mRpS5	72	40.203	ENSFHEG00000007507	mrps5	80	40.203	Fundulus_heteroclitus
FBgn0044510	mRpS5	59	38.017	ENSGMOG00000008049	mrps5	93	38.017	Gadus_morhua
FBgn0044510	mRpS5	74	43.092	ENSGALG00000008550	MRPS5	79	41.486	Gallus_gallus
FBgn0044510	mRpS5	85	40.401	ENSGAFG00000012707	mrps5	84	40.401	Gambusia_affinis
FBgn0044510	mRpS5	58	45.643	ENSGACG00000000216	mrps5	81	45.643	Gasterosteus_aculeatus
FBgn0044510	mRpS5	66	46.520	ENSGAGG00000005665	MRPS5	79	46.520	Gopherus_agassizii
FBgn0044510	mRpS5	71	35.836	ENSGGOG00000022731	-	64	35.836	Gorilla_gorilla
FBgn0044510	mRpS5	80	41.159	ENSGGOG00000001750	MRPS5	73	41.159	Gorilla_gorilla
FBgn0044510	mRpS5	80	33.432	ENSHBUG00000006687	mrps5	86	34.743	Haplochromis_burtoni
FBgn0044510	mRpS5	71	44.863	ENSHGLG00000016278	MRPS5	68	44.863	Heterocephalus_glaber_female
FBgn0044510	mRpS5	71	44.863	ENSHGLG00100013743	MRPS5	68	44.863	Heterocephalus_glaber_male
FBgn0044510	mRpS5	70	43.478	ENSHCOG00000014200	mrps5	88	43.478	Hippocampus_comes
FBgn0044510	mRpS5	73	44.444	ENSIPUG00000018395	mrps5	64	44.444	Ictalurus_punctatus
FBgn0044510	mRpS5	71	42.808	ENSJJAG00000022513	Mrps5	71	42.808	Jaculus_jaculus
FBgn0044510	mRpS5	76	44.762	ENSKMAG00000016581	mrps5	80	43.465	Kryptolebias_marmoratus
FBgn0044510	mRpS5	76	42.222	ENSLBEG00000007499	mrps5	69	42.222	Labrus_bergylta
FBgn0044510	mRpS5	58	42.149	ENSLOCG00000015618	mrps5	83	42.149	Lepisosteus_oculatus
FBgn0044510	mRpS5	70	39.446	ENSMFAG00000002850	-	71	39.446	Macaca_fascicularis
FBgn0044510	mRpS5	71	42.123	ENSMFAG00000043526	MRPS5	68	43.493	Macaca_fascicularis
FBgn0044510	mRpS5	77	38.730	ENSMMUG00000003033	-	79	38.730	Macaca_mulatta
FBgn0044510	mRpS5	71	42.466	ENSMNEG00000041571	-	68	43.836	Macaca_nemestrina
FBgn0044510	mRpS5	71	39.863	ENSMNEG00000028934	-	66	39.863	Macaca_nemestrina
FBgn0044510	mRpS5	70	39.100	ENSMNEG00000029316	-	71	39.100	Macaca_nemestrina
FBgn0044510	mRpS5	70	39.446	ENSMLEG00000006829	-	74	39.446	Mandrillus_leucophaeus
FBgn0044510	mRpS5	71	44.863	ENSMLEG00000032039	MRPS5	60	44.863	Mandrillus_leucophaeus
FBgn0044510	mRpS5	74	43.421	ENSMAMG00000022074	mrps5	79	42.453	Mastacembelus_armatus
FBgn0044510	mRpS5	74	40.199	ENSMZEG00005020014	mrps5	72	40.199	Maylandia_zebra
FBgn0044510	mRpS5	76	41.853	ENSMGAG00000007201	MRPS5	92	41.853	Meleagris_gallopavo
FBgn0044510	mRpS5	71	45.051	ENSMAUG00000002765	Mrps5	68	45.051	Mesocricetus_auratus
FBgn0044510	mRpS5	66	43.333	ENSMICG00000007318	-	75	43.333	Microcebus_murinus
FBgn0044510	mRpS5	67	41.818	ENSMICG00000046753	-	63	41.818	Microcebus_murinus
FBgn0044510	mRpS5	71	44.521	ENSMOCG00000001710	Mrps5	68	44.521	Microtus_ochrogaster
FBgn0044510	mRpS5	74	37.908	ENSMMOG00000007366	mrps5	73	39.610	Mola_mola
FBgn0044510	mRpS5	71	45.361	ENSMODG00000007235	MRPS5	83	43.034	Monodelphis_domestica
FBgn0044510	mRpS5	82	36.443	ENSMALG00000020388	mrps5	84	36.443	Monopterus_albus
FBgn0044510	mRpS5	71	44.863	MGP_CAROLIEiJ_G0024262	Mrps5	67	44.863	Mus_caroli
FBgn0044510	mRpS5	71	44.863	ENSMUSG00000027374	Mrps5	67	44.863	Mus_musculus
FBgn0044510	mRpS5	71	44.863	MGP_SPRETEiJ_G0025182	Mrps5	67	44.863	Mus_spretus
FBgn0044510	mRpS5	71	43.003	ENSMPUG00000009170	MRPS5	68	43.003	Mustela_putorius_furo
FBgn0044510	mRpS5	71	43.345	ENSMLUG00000003183	MRPS5	68	43.345	Myotis_lucifugus
FBgn0044510	mRpS5	71	44.178	ENSNGAG00000013050	Mrps5	68	44.178	Nannospalax_galili
FBgn0044510	mRpS5	71	43.493	ENSNLEG00000000002	MRPS5	68	43.493	Nomascus_leucogenys
FBgn0044510	mRpS5	73	44.482	ENSOPRG00000005079	MRPS5	72	44.482	Ochotona_princeps
FBgn0044510	mRpS5	71	44.710	ENSODEG00000006937	MRPS5	72	44.710	Octodon_degus
FBgn0044510	mRpS5	77	43.082	ENSONIG00000001150	mrps5	78	43.082	Oreochromis_niloticus
FBgn0044510	mRpS5	71	43.493	ENSOCUG00000003547	MRPS5	68	43.493	Oryctolagus_cuniculus
FBgn0044510	mRpS5	75	44.194	ENSORLG00020014512	mrps5	76	44.194	Oryzias_latipes_hni
FBgn0044510	mRpS5	75	43.548	ENSORLG00015019956	mrps5	76	43.548	Oryzias_latipes_hsok
FBgn0044510	mRpS5	75	42.903	ENSOMEG00000013610	mrps5	71	42.903	Oryzias_melastigma
FBgn0044510	mRpS5	71	44.521	ENSOGAG00000031363	MRPS5	67	44.521	Otolemur_garnettii
FBgn0044510	mRpS5	71	43.686	ENSOARG00000014191	MRPS5	69	43.686	Ovis_aries
FBgn0044510	mRpS5	80	42.073	ENSPPAG00000039966	MRPS5	73	42.073	Pan_paniscus
FBgn0044510	mRpS5	71	35.154	ENSPPAG00000015080	-	64	35.154	Pan_paniscus
FBgn0044510	mRpS5	71	45.205	ENSPPRG00000004724	MRPS5	68	45.205	Panthera_pardus
FBgn0044510	mRpS5	80	42.988	ENSPTIG00000011824	MRPS5	73	42.988	Panthera_tigris_altaica
FBgn0044510	mRpS5	80	42.073	ENSPTRG00000012209	MRPS5	73	42.073	Pan_troglodytes
FBgn0044510	mRpS5	71	35.154	ENSPTRG00000048267	-	64	35.154	Pan_troglodytes
FBgn0044510	mRpS5	71	44.863	ENSPANG00000022839	MRPS5	68	44.863	Papio_anubis
FBgn0044510	mRpS5	70	39.792	ENSPANG00000032455	-	71	39.792	Papio_anubis
FBgn0044510	mRpS5	74	42.951	ENSPKIG00000022123	mrps5	76	42.951	Paramormyrops_kingsleyae
FBgn0044510	mRpS5	71	45.205	ENSPSIG00000004820	MRPS5	79	45.205	Pelodiscus_sinensis
FBgn0044510	mRpS5	77	38.413	ENSPMGG00000003674	mrps5	81	38.413	Periophthalmus_magnuspinnatus
FBgn0044510	mRpS5	71	44.863	ENSPEMG00000012667	Mrps5	68	44.863	Peromyscus_maniculatus_bairdii
FBgn0044510	mRpS5	66	44.689	ENSPMAG00000007465	mrps5	95	44.689	Petromyzon_marinus
FBgn0044510	mRpS5	71	42.808	ENSPCIG00000003207	-	67	42.808	Phascolarctos_cinereus
FBgn0044510	mRpS5	74	44.079	ENSPFOG00000006753	mrps5	76	43.548	Poecilia_formosa
FBgn0044510	mRpS5	74	44.408	ENSPLAG00000015964	mrps5	76	43.871	Poecilia_latipinna
FBgn0044510	mRpS5	74	44.079	ENSPMEG00000023362	mrps5	76	43.548	Poecilia_mexicana
FBgn0044510	mRpS5	75	43.226	ENSPREG00000001722	mrps5	76	43.226	Poecilia_reticulata
FBgn0044510	mRpS5	80	42.073	ENSPPYG00000012051	MRPS5	73	42.073	Pongo_abelii
FBgn0044510	mRpS5	71	44.178	ENSPCOG00000026442	MRPS5	72	44.178	Propithecus_coquereli
FBgn0044510	mRpS5	71	45.548	ENSPVAG00000006094	MRPS5	68	45.548	Pteropus_vampyrus
FBgn0044510	mRpS5	80	42.424	ENSPNYG00000009861	mrps5	81	42.424	Pundamilia_nyererei
FBgn0044510	mRpS5	74	45.425	ENSPNAG00000011574	mrps5	78	42.683	Pygocentrus_nattereri
FBgn0044510	mRpS5	71	45.548	ENSRNOG00000015192	Mrps5	67	45.548	Rattus_norvegicus
FBgn0044510	mRpS5	77	37.107	ENSRROG00000036340	-	73	37.107	Rhinopithecus_roxellana
FBgn0044510	mRpS5	71	43.836	ENSRROG00000037350	MRPS5	68	43.836	Rhinopithecus_roxellana
FBgn0044510	mRpS5	71	44.178	ENSSBOG00000021540	MRPS5	68	44.178	Saimiri_boliviensis_boliviensis
FBgn0044510	mRpS5	73	44.040	ENSSHAG00000012969	MRPS5	70	44.040	Sarcophilus_harrisii
FBgn0044510	mRpS5	77	41.139	ENSSFOG00015006898	mrps5	79	41.139	Scleropages_formosus
FBgn0044510	mRpS5	81	41.617	ENSSMAG00000019624	mrps5	82	41.617	Scophthalmus_maximus
FBgn0044510	mRpS5	76	43.711	ENSSDUG00000019792	mrps5	78	43.711	Seriola_dumerili
FBgn0044510	mRpS5	76	40.881	ENSSLDG00000016726	mrps5	78	40.881	Seriola_lalandi_dorsalis
FBgn0044510	mRpS5	69	40.071	ENSSPUG00000018881	MRPS5	80	40.071	Sphenodon_punctatus
FBgn0044510	mRpS5	74	45.098	ENSSPAG00000021042	mrps5	75	45.098	Stegastes_partitus
FBgn0044510	mRpS5	71	45.205	ENSSSCG00000008113	MRPS5	68	45.205	Sus_scrofa
FBgn0044510	mRpS5	74	42.157	ENSTGUG00000002166	MRPS5	81	41.776	Taeniopygia_guttata
FBgn0044510	mRpS5	71	40.411	ENSTBEG00000013607	MRPS5	76	40.411	Tupaia_belangeri
FBgn0044510	mRpS5	71	44.521	ENSTTRG00000004963	MRPS5	72	44.521	Tursiops_truncatus
FBgn0044510	mRpS5	66	44.689	ENSUAMG00000011086	MRPS5	70	44.689	Ursus_americanus
FBgn0044510	mRpS5	71	44.863	ENSUMAG00000012079	MRPS5	69	46.909	Ursus_maritimus
FBgn0044510	mRpS5	71	44.863	ENSVPAG00000003674	MRPS5	71	44.863	Vicugna_pacos
FBgn0044510	mRpS5	71	44.521	ENSVVUG00000027421	MRPS5	68	44.521	Vulpes_vulpes
FBgn0044510	mRpS5	71	42.321	ENSXETG00000022440	mrps5	82	42.321	Xenopus_tropicalis
FBgn0044510	mRpS5	76	40.127	ENSXCOG00000000561	mrps5	81	40.127	Xiphophorus_couchianus
FBgn0044510	mRpS5	76	43.312	ENSXMAG00000028833	mrps5	77	43.312	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279123.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	11279123.	ISS	Component
GO:0005763	mitochondrial small ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	11279123.	ISS	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process