EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0045862 (Gene tree)
Gene ID: 43331
Gene Symbol: btz
Alias: -
Full Name: barentsz
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 3085 bases
Position: chr3R:27700361-27703445
Accession: FBgn0045862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0084590	Btz	PF09405.10	2e-39	1	1
FBpp0303117	Btz	PF09405.10	2e-39	1	1
FBpp0084591	Btz	PF09405.10	2.1e-39	1	1
FBpp0303118	Btz	PF09405.10	2.2e-39	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0085221	-	3021	-	FBpp0084591	782 (aa)	-	C8VV40
FBtr0085220	-	2742	-	FBpp0084590	761 (aa)	-	Q9VB04
FBtr0330084	-	2671	-	FBpp0303117	761 (aa)	-	Q9VB04
FBtr0330085	-	3009	-	FBpp0303118	806 (aa)	-	A0A0B4KH64

Gene Model

Click here to download FBgn0045862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0045862's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005635	nuclear envelope	11481346.	IDA	Component
GO:0005737	cytoplasm	11481346.	IDA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0007318	pole plasm protein localization	11481346.	IMP	Process
GO:0008103	oocyte microtubule cytoskeleton polarization	17275299.	IMP	Process
GO:0008103	oocyte microtubule cytoskeleton polarization	11481346.	IMP	Process
GO:0008380	RNA splicing	25081352.	IMP	Process
GO:0031369	translation initiation factor binding	14973490.	IPI	Function
GO:0045450	bicoid mRNA localization	11481346.	IMP	Process
GO:0045451	pole plasm oskar mRNA localization	11481346.	IMP	Process
GO:0045451	pole plasm oskar mRNA localization	14973490.	IPI	Process
GO:0045451	pole plasm oskar mRNA localization	12446149.	TAS	Process
GO:0071598	neuronal ribonucleoprotein granule	17178403.	IDA	Component
GO:1990124	messenger ribonucleoprotein complex	17178403.	IDA	Component