EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0050390 (Gene tree)
Gene ID: 37429
Gene Symbol: Sgf29
Alias: -
Full Name: SAGA-associated factor 29kDa
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1408 bases
Position: chr2R:21292239-21293646
Accession: FBgn0050390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0071543	DUF1325	PF07039.11	7.8e-37	1	1
FBpp0309689	DUF1325	PF07039.11	7.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0342888	-	1150	-	FBpp0309689	289 (aa)	-	Q6IDG9
FBtr0071617	-	1027	-	FBpp0071543	289 (aa)	-	Q9W2I4

Gene Model

Click here to download FBgn0050390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0050390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0050390	Sgf29	94	49.306	ENSG00000176476	SGF29	98	49.306	Homo_sapiens
FBgn0050390	Sgf29	94	48.958	ENSAPOG00000007072	sgf29	99	48.958	Acanthochromis_polyacanthus
FBgn0050390	Sgf29	94	47.222	ENSAMEG00000015388	SGF29	98	47.222	Ailuropoda_melanoleuca
FBgn0050390	Sgf29	79	54.043	ENSACIG00000024432	sgf29	94	54.043	Amphilophus_citrinellus
FBgn0050390	Sgf29	94	48.958	ENSAOCG00000013494	sgf29	99	48.958	Amphiprion_ocellaris
FBgn0050390	Sgf29	81	47.600	ENSAPEG00000007284	sgf29	93	47.600	Amphiprion_percula
FBgn0050390	Sgf29	94	48.958	ENSATEG00000017566	sgf29	99	48.958	Anabas_testudineus
FBgn0050390	Sgf29	94	49.306	ENSACAG00000006595	SGF29	98	49.306	Anolis_carolinensis
FBgn0050390	Sgf29	92	45.556	ENSANAG00000032813	-	97	48.163	Aotus_nancymaae
FBgn0050390	Sgf29	94	49.306	ENSANAG00000037641	-	93	54.468	Aotus_nancymaae
FBgn0050390	Sgf29	91	46.324	ENSANAG00000023337	-	88	48.117	Aotus_nancymaae
FBgn0050390	Sgf29	94	48.611	ENSACLG00000016730	sgf29	99	48.611	Astatotilapia_calliptera
FBgn0050390	Sgf29	94	48.980	ENSAMXG00000003395	sgf29	98	48.980	Astyanax_mexicanus
FBgn0050390	Sgf29	94	49.306	ENSBTAG00000016883	SGF29	98	49.306	Bos_taurus
FBgn0050390	Sgf29	72	39.336	WBGene00021205	Y17G9B.8	87	39.336	Caenorhabditis_elegans
FBgn0050390	Sgf29	94	49.306	ENSCJAG00000006577	SGF29	93	54.468	Callithrix_jacchus
FBgn0050390	Sgf29	90	49.281	ENSCAFG00000017127	SGF29	91	49.281	Canis_familiaris
FBgn0050390	Sgf29	90	49.281	ENSCAFG00020017597	SGF29	91	49.281	Canis_lupus_dingo
FBgn0050390	Sgf29	94	49.306	ENSCHIG00000015325	SGF29	98	49.306	Capra_hircus
FBgn0050390	Sgf29	94	49.306	ENSTSYG00000025878	-	94	54.468	Carlito_syrichta
FBgn0050390	Sgf29	84	51.394	ENSTSYG00000003314	-	96	51.394	Carlito_syrichta
FBgn0050390	Sgf29	73	46.522	ENSCAPG00000000732	SGF29	90	46.522	Cavia_aperea
FBgn0050390	Sgf29	94	49.306	ENSCPOG00000027037	SGF29	98	49.306	Cavia_porcellus
FBgn0050390	Sgf29	94	39.273	ENSCCAG00000027313	-	65	39.273	Cebus_capucinus
FBgn0050390	Sgf29	94	49.306	ENSCCAG00000027359	-	98	49.306	Cebus_capucinus
FBgn0050390	Sgf29	94	49.306	ENSCATG00000034020	SGF29	98	49.306	Cercocebus_atys
FBgn0050390	Sgf29	94	49.306	ENSCLAG00000011510	SGF29	98	49.306	Chinchilla_lanigera
FBgn0050390	Sgf29	94	45.578	ENSCSAG00000006259	SGF29	98	45.578	Chlorocebus_sabaeus
FBgn0050390	Sgf29	50	44.444	ENSCHOG00000013831	-	56	44.444	Choloepus_hoffmanni
FBgn0050390	Sgf29	94	50.347	ENSCPBG00000012638	SGF29	83	50.347	Chrysemys_picta_bellii
FBgn0050390	Sgf29	93	43.158	ENSCING00000012953	-	97	43.158	Ciona_intestinalis
FBgn0050390	Sgf29	51	46.753	ENSCSAVG00000007328	-	64	46.753	Ciona_savignyi
FBgn0050390	Sgf29	79	47.347	ENSCANG00000039654	SGF29	98	47.347	Colobus_angolensis_palliatus
FBgn0050390	Sgf29	94	49.306	ENSCGRG00001016730	-	98	49.306	Cricetulus_griseus_chok1gshd
FBgn0050390	Sgf29	94	47.902	ENSCGRG00001014941	-	98	47.902	Cricetulus_griseus_chok1gshd
FBgn0050390	Sgf29	94	49.306	ENSCGRG00000003808	Sgf29	98	49.306	Cricetulus_griseus_crigri
FBgn0050390	Sgf29	79	54.043	ENSCSEG00000010575	sgf29	95	51.311	Cynoglossus_semilaevis
FBgn0050390	Sgf29	94	49.306	ENSCVAG00000014381	sgf29	99	49.306	Cyprinodon_variegatus
FBgn0050390	Sgf29	94	49.653	ENSDARG00000002339	sgf29	98	49.653	Danio_rerio
FBgn0050390	Sgf29	94	49.306	ENSDNOG00000048338	SGF29	98	49.306	Dasypus_novemcinctus
FBgn0050390	Sgf29	94	49.306	ENSDORG00000007002	Sgf29	98	49.306	Dipodomys_ordii
FBgn0050390	Sgf29	94	47.931	ENSEBUG00000008631	sgf29	98	47.931	Eptatretus_burgeri
FBgn0050390	Sgf29	92	50.182	ENSEASG00005014751	SGF29	91	50.182	Equus_asinus_asinus
FBgn0050390	Sgf29	94	50.000	ENSECAG00000011445	SGF29	93	50.000	Equus_caballus
FBgn0050390	Sgf29	89	51.311	ENSEEUG00000008521	SGF29	97	51.311	Erinaceus_europaeus
FBgn0050390	Sgf29	94	48.958	ENSELUG00000023888	sgf29	99	48.958	Esox_lucius
FBgn0050390	Sgf29	94	49.306	ENSFCAG00000012297	SGF29	98	49.306	Felis_catus
FBgn0050390	Sgf29	94	48.958	ENSFDAG00000012928	SGF29	98	48.958	Fukomys_damarensis
FBgn0050390	Sgf29	81	47.600	ENSFHEG00000022427	sgf29	93	47.600	Fundulus_heteroclitus
FBgn0050390	Sgf29	94	46.713	ENSGMOG00000000328	sgf29	99	46.713	Gadus_morhua
FBgn0050390	Sgf29	94	48.958	ENSGALG00000020590	SGF29	98	48.958	Gallus_gallus
FBgn0050390	Sgf29	94	49.306	ENSGAFG00000020626	sgf29	99	49.306	Gambusia_affinis
FBgn0050390	Sgf29	94	47.222	ENSGACG00000015001	sgf29	99	47.222	Gasterosteus_aculeatus
FBgn0050390	Sgf29	94	49.653	ENSGAGG00000012655	SGF29	98	49.653	Gopherus_agassizii
FBgn0050390	Sgf29	94	48.958	ENSGGOG00000000807	-	98	48.958	Gorilla_gorilla
FBgn0050390	Sgf29	63	56.614	ENSHBUG00000013677	sgf29	78	56.614	Haplochromis_burtoni
FBgn0050390	Sgf29	94	49.306	ENSHGLG00000014468	SGF29	98	49.306	Heterocephalus_glaber_female
FBgn0050390	Sgf29	94	49.306	ENSHGLG00100000132	SGF29	98	49.306	Heterocephalus_glaber_male
FBgn0050390	Sgf29	94	48.958	ENSHCOG00000002018	sgf29	99	48.958	Hippocampus_comes
FBgn0050390	Sgf29	94	49.306	ENSIPUG00000001851	sgf29	98	49.306	Ictalurus_punctatus
FBgn0050390	Sgf29	94	49.306	ENSSTOG00000013258	SGF29	98	49.306	Ictidomys_tridecemlineatus
FBgn0050390	Sgf29	94	49.306	ENSJJAG00000009013	Sgf29	98	49.306	Jaculus_jaculus
FBgn0050390	Sgf29	94	48.958	ENSKMAG00000004341	sgf29	95	54.468	Kryptolebias_marmoratus
FBgn0050390	Sgf29	79	54.468	ENSLBEG00000006754	sgf29	94	54.468	Labrus_bergylta
FBgn0050390	Sgf29	79	45.957	ENSLACG00000005336	SGF29	96	45.957	Latimeria_chalumnae
FBgn0050390	Sgf29	94	49.306	ENSLAFG00000028439	SGF29	98	49.306	Loxodonta_africana
FBgn0050390	Sgf29	94	49.306	ENSMFAG00000038040	SGF29	98	49.306	Macaca_fascicularis
FBgn0050390	Sgf29	94	49.306	ENSMMUG00000011370	SGF29	98	49.306	Macaca_mulatta
FBgn0050390	Sgf29	94	49.306	ENSMNEG00000043534	SGF29	95	54.468	Macaca_nemestrina
FBgn0050390	Sgf29	94	49.306	ENSMLEG00000031039	SGF29	98	49.306	Mandrillus_leucophaeus
FBgn0050390	Sgf29	94	48.958	ENSMAMG00000017907	sgf29	99	48.958	Mastacembelus_armatus
FBgn0050390	Sgf29	94	48.611	ENSMZEG00005001194	sgf29	99	48.611	Maylandia_zebra
FBgn0050390	Sgf29	94	48.611	ENSMZEG00005002947	sgf29	99	48.611	Maylandia_zebra
FBgn0050390	Sgf29	94	48.958	ENSMGAG00000012201	SGF29	98	48.958	Meleagris_gallopavo
FBgn0050390	Sgf29	94	49.306	ENSMAUG00000011063	Sgf29	98	49.306	Mesocricetus_auratus
FBgn0050390	Sgf29	94	49.306	ENSMICG00000009973	SGF29	98	49.306	Microcebus_murinus
FBgn0050390	Sgf29	94	49.306	ENSMOCG00000021358	Sgf29	98	49.306	Microtus_ochrogaster
FBgn0050390	Sgf29	79	53.191	ENSMMOG00000012706	sgf29	93	53.191	Mola_mola
FBgn0050390	Sgf29	94	49.653	ENSMODG00000015642	SGF29	98	49.653	Monodelphis_domestica
FBgn0050390	Sgf29	94	48.958	ENSMALG00000000231	sgf29	96	48.958	Monopterus_albus
FBgn0050390	Sgf29	94	49.306	MGP_CAROLIEiJ_G0030456	Sgf29	91	60.417	Mus_caroli
FBgn0050390	Sgf29	94	49.306	ENSMUSG00000030714	Sgf29	90	60.417	Mus_musculus
FBgn0050390	Sgf29	94	49.306	MGP_PahariEiJ_G0013666	Sgf29	95	58.278	Mus_pahari
FBgn0050390	Sgf29	94	49.306	MGP_SPRETEiJ_G0031570	Sgf29	91	60.417	Mus_spretus
FBgn0050390	Sgf29	94	49.306	ENSMPUG00000012669	SGF29	98	49.306	Mustela_putorius_furo
FBgn0050390	Sgf29	94	49.306	ENSMLUG00000022554	SGF29	98	49.306	Myotis_lucifugus
FBgn0050390	Sgf29	94	49.306	ENSNGAG00000022634	Sgf29	98	49.306	Nannospalax_galili
FBgn0050390	Sgf29	79	54.043	ENSNBRG00000020775	sgf29	94	54.043	Neolamprologus_brichardi
FBgn0050390	Sgf29	94	42.361	ENSNLEG00000001604	SGF29	98	42.361	Nomascus_leucogenys
FBgn0050390	Sgf29	52	64.430	ENSMEUG00000006221	SGF29	51	64.430	Notamacropus_eugenii
FBgn0050390	Sgf29	94	50.000	ENSOPRG00000009316	SGF29	98	50.000	Ochotona_princeps
FBgn0050390	Sgf29	94	49.306	ENSODEG00000013702	SGF29	98	49.306	Octodon_degus
FBgn0050390	Sgf29	94	48.611	ENSONIG00000009377	sgf29	99	48.611	Oreochromis_niloticus
FBgn0050390	Sgf29	66	54.822	ENSOANG00000009696	SGF29	99	54.822	Ornithorhynchus_anatinus
FBgn0050390	Sgf29	79	41.277	ENSOCUG00000021684	-	95	41.277	Oryctolagus_cuniculus
FBgn0050390	Sgf29	89	51.311	ENSOCUG00000025361	-	97	51.311	Oryctolagus_cuniculus
FBgn0050390	Sgf29	94	48.958	ENSORLG00000027873	sgf29	99	48.958	Oryzias_latipes
FBgn0050390	Sgf29	94	48.958	ENSORLG00020020976	-	99	48.958	Oryzias_latipes_hni
FBgn0050390	Sgf29	94	48.958	ENSORLG00015011795	sgf29	99	48.958	Oryzias_latipes_hsok
FBgn0050390	Sgf29	94	48.958	ENSOMEG00000020118	sgf29	99	48.958	Oryzias_melastigma
FBgn0050390	Sgf29	94	49.306	ENSOGAG00000015794	-	98	49.306	Otolemur_garnettii
FBgn0050390	Sgf29	93	38.129	ENSOGAG00000034571	-	98	38.129	Otolemur_garnettii
FBgn0050390	Sgf29	94	49.306	ENSOARG00000003226	SGF29	98	49.306	Ovis_aries
FBgn0050390	Sgf29	90	49.819	ENSPPAG00000039380	SGF29	95	54.468	Pan_paniscus
FBgn0050390	Sgf29	94	49.306	ENSPPRG00000006831	SGF29	98	49.306	Panthera_pardus
FBgn0050390	Sgf29	94	49.306	ENSPTIG00000014381	SGF29	98	49.306	Panthera_tigris_altaica
FBgn0050390	Sgf29	94	37.234	ENSPTRG00000007925	SGF29	98	37.500	Pan_troglodytes
FBgn0050390	Sgf29	94	49.306	ENSPANG00000019684	SGF29	98	49.306	Papio_anubis
FBgn0050390	Sgf29	94	46.181	ENSPKIG00000018503	sgf29	98	46.181	Paramormyrops_kingsleyae
FBgn0050390	Sgf29	94	50.719	ENSPMGG00000006683	sgf29	98	50.719	Periophthalmus_magnuspinnatus
FBgn0050390	Sgf29	94	49.653	ENSPCIG00000025200	SGF29	98	49.653	Phascolarctos_cinereus
FBgn0050390	Sgf29	94	49.306	ENSPFOG00000010035	sgf29	98	49.306	Poecilia_formosa
FBgn0050390	Sgf29	94	49.306	ENSPLAG00000000559	sgf29	99	49.306	Poecilia_latipinna
FBgn0050390	Sgf29	94	49.306	ENSPMEG00000007026	sgf29	99	49.306	Poecilia_mexicana
FBgn0050390	Sgf29	94	49.306	ENSPREG00000011868	sgf29	99	49.306	Poecilia_reticulata
FBgn0050390	Sgf29	94	49.306	ENSPPYG00000007233	SGF29	98	49.306	Pongo_abelii
FBgn0050390	Sgf29	94	49.306	ENSPCOG00000028233	SGF29	98	49.306	Propithecus_coquereli
FBgn0050390	Sgf29	79	54.043	ENSPNYG00000012353	sgf29	94	54.043	Pundamilia_nyererei
FBgn0050390	Sgf29	79	55.319	ENSPNAG00000014651	sgf29	94	55.319	Pygocentrus_nattereri
FBgn0050390	Sgf29	94	48.958	ENSRNOG00000019245	Sgf29	98	48.958	Rattus_norvegicus
FBgn0050390	Sgf29	94	49.306	ENSRBIG00000041003	SGF29	98	49.306	Rhinopithecus_bieti
FBgn0050390	Sgf29	94	49.306	ENSRROG00000044894	SGF29	98	49.306	Rhinopithecus_roxellana
FBgn0050390	Sgf29	89	51.311	ENSSBOG00000008004	SGF29	99	52.569	Saimiri_boliviensis_boliviensis
FBgn0050390	Sgf29	94	49.653	ENSSHAG00000011279	-	98	49.653	Sarcophilus_harrisii
FBgn0050390	Sgf29	50	47.586	ENSSHAG00000002930	-	68	47.586	Sarcophilus_harrisii
FBgn0050390	Sgf29	94	46.181	ENSSFOG00015001254	sgf29	98	46.181	Scleropages_formosus
FBgn0050390	Sgf29	94	49.306	ENSSMAG00000016613	sgf29	99	49.306	Scophthalmus_maximus
FBgn0050390	Sgf29	94	48.958	ENSSDUG00000005977	sgf29	99	48.958	Seriola_dumerili
FBgn0050390	Sgf29	94	48.958	ENSSLDG00000012446	sgf29	99	48.958	Seriola_lalandi_dorsalis
FBgn0050390	Sgf29	94	49.653	ENSSPUG00000010121	SGF29	98	49.653	Sphenodon_punctatus
FBgn0050390	Sgf29	94	48.958	ENSSPAG00000018994	sgf29	99	48.958	Stegastes_partitus
FBgn0050390	Sgf29	94	49.306	ENSSSCG00000022778	SGF29	98	49.306	Sus_scrofa
FBgn0050390	Sgf29	91	48.929	ENSTNIG00000006496	SGF29	99	48.929	Tetraodon_nigroviridis
FBgn0050390	Sgf29	94	48.611	ENSTNIG00000001984	sgf29	98	48.611	Tetraodon_nigroviridis
FBgn0050390	Sgf29	92	50.182	ENSUAMG00000010172	SGF29	85	50.182	Ursus_americanus
FBgn0050390	Sgf29	86	51.362	ENSUMAG00000010966	SGF29	78	51.362	Ursus_maritimus
FBgn0050390	Sgf29	94	49.306	ENSXETG00000033185	sgf29	98	49.306	Xenopus_tropicalis
FBgn0050390	Sgf29	93	49.129	ENSXCOG00000011501	sgf29	99	49.129	Xiphophorus_couchianus
FBgn0050390	Sgf29	94	49.306	ENSXMAG00000010932	sgf29	99	49.306	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000124	SAGA complex	21873635.	IBA	Component
GO:0000124	SAGA complex	16980620.21764853.	IDA	Component
GO:0001135	RNA polymerase II transcription regulator recruiting activity	21873635.	IBA	Function
GO:0004402	histone acetyltransferase activity	16980620.18327268.	IDA	Function
GO:0005634	nucleus	16980620.21764853.	IDA	Component
GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex	21873635.	IBA	Component
GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex	22345504.	IDA	Component
GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex	18327268.	IPI	Component
GO:0006338	chromatin remodeling	18327268.	IDA	Process
GO:0016573	histone acetylation	18327268.	IDA	Process
GO:0035064	methylated histone binding	21873635.	IBA	Function
GO:0035064	methylated histone binding	-	ISS	Function
GO:0043966	histone H3 acetylation	21873635.	IBA	Process
GO:0043966	histone H3 acetylation	16980620.	IDA	Process