EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0051155 (Gene tree)
Gene ID: 261631
Gene Symbol: Rpb7
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 930 bases
Position: chr3R:15222251-15223180
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082591	S1	PF00575.23	1e-14	1	1
FBpp0082591	SHS2_Rpb7-N	PF03876.17	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083137	-	759	-	FBpp0082591	173 (aa)	-	Q9VFB5

Gene Model

Click here to download FBgn0051155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0051155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0051155	Rpb7	99	81.395	ENSG00000168002	POLR2G	100	87.805	Homo_sapiens
FBgn0051155	Rpb7	98	79.290	ENSAPOG00000010949	polr2gl	99	79.290	Acanthochromis_polyacanthus
FBgn0051155	Rpb7	99	81.395	ENSAMEG00000006386	POLR2G	100	81.395	Ailuropoda_melanoleuca
FBgn0051155	Rpb7	98	79.290	ENSACIG00000007252	polr2gl	88	79.290	Amphilophus_citrinellus
FBgn0051155	Rpb7	99	81.395	ENSAOCG00000013628	polr2gl	100	81.395	Amphiprion_ocellaris
FBgn0051155	Rpb7	99	81.395	ENSAPEG00000011229	polr2gl	100	81.395	Amphiprion_percula
FBgn0051155	Rpb7	99	81.395	ENSATEG00000013382	polr2gl	100	81.395	Anabas_testudineus
FBgn0051155	Rpb7	97	81.437	ENSACAG00000001005	POLR2G	97	81.437	Anolis_carolinensis
FBgn0051155	Rpb7	99	81.395	ENSANAG00000037428	POLR2G	100	81.395	Aotus_nancymaae
FBgn0051155	Rpb7	99	80.814	ENSACLG00000014753	polr2gl	100	80.814	Astatotilapia_calliptera
FBgn0051155	Rpb7	99	81.395	ENSAMXG00000030439	polr2gl	100	81.395	Astyanax_mexicanus
FBgn0051155	Rpb7	99	81.395	ENSBTAG00000009483	POLR2G	100	81.395	Bos_taurus
FBgn0051155	Rpb7	98	71.176	WBGene00021845	rpb-7	86	71.176	Caenorhabditis_elegans
FBgn0051155	Rpb7	99	81.395	ENSCJAG00000018688	POLR2G	100	81.395	Callithrix_jacchus
FBgn0051155	Rpb7	55	87.368	ENSCAFG00000015461	POLR2G	81	87.368	Canis_familiaris
FBgn0051155	Rpb7	99	81.395	ENSCAFG00020013136	POLR2G	100	81.395	Canis_lupus_dingo
FBgn0051155	Rpb7	98	81.065	ENSCHIG00000023730	POLR2G	89	81.065	Capra_hircus
FBgn0051155	Rpb7	99	80.814	ENSTSYG00000011918	POLR2G	100	80.814	Carlito_syrichta
FBgn0051155	Rpb7	76	79.389	ENSCAPG00000017572	POLR2G	100	79.389	Cavia_aperea
FBgn0051155	Rpb7	99	81.395	ENSCPOG00000036420	POLR2G	100	81.395	Cavia_porcellus
FBgn0051155	Rpb7	99	73.256	ENSCCAG00000033483	-	95	73.256	Cebus_capucinus
FBgn0051155	Rpb7	99	81.395	ENSCATG00000034443	POLR2G	100	81.395	Cercocebus_atys
FBgn0051155	Rpb7	99	81.395	ENSCLAG00000000802	POLR2G	100	81.395	Chinchilla_lanigera
FBgn0051155	Rpb7	99	81.395	ENSCSAG00000006715	POLR2G	100	81.395	Chlorocebus_sabaeus
FBgn0051155	Rpb7	77	82.707	ENSCHOG00000009928	POLR2G	100	82.707	Choloepus_hoffmanni
FBgn0051155	Rpb7	99	81.395	ENSCPBG00000017972	POLR2G	100	81.395	Chrysemys_picta_bellii
FBgn0051155	Rpb7	99	80.814	ENSCING00000004991	-	100	80.814	Ciona_intestinalis
FBgn0051155	Rpb7	99	76.744	ENSCSAVG00000002667	-	100	76.744	Ciona_savignyi
FBgn0051155	Rpb7	99	81.395	ENSCANG00000043203	POLR2G	100	81.395	Colobus_angolensis_palliatus
FBgn0051155	Rpb7	99	81.395	ENSCGRG00001022692	-	100	81.395	Cricetulus_griseus_chok1gshd
FBgn0051155	Rpb7	99	75.581	ENSCGRG00001011370	-	100	75.581	Cricetulus_griseus_chok1gshd
FBgn0051155	Rpb7	99	81.395	ENSCGRG00000015350	Polr2g	100	81.395	Cricetulus_griseus_crigri
FBgn0051155	Rpb7	97	80.952	ENSCSEG00000011991	polr2gl	90	80.952	Cynoglossus_semilaevis
FBgn0051155	Rpb7	99	81.395	ENSCVAG00000021090	polr2gl	100	81.395	Cyprinodon_variegatus
FBgn0051155	Rpb7	99	81.977	ENSDARG00000056127	polr2gl	100	81.977	Danio_rerio
FBgn0051155	Rpb7	99	81.395	ENSDNOG00000043426	POLR2G	100	81.395	Dasypus_novemcinctus
FBgn0051155	Rpb7	99	79.651	ENSDORG00000010351	-	100	79.651	Dipodomys_ordii
FBgn0051155	Rpb7	85	87.500	ENSDORG00000015696	-	100	87.500	Dipodomys_ordii
FBgn0051155	Rpb7	99	66.860	ENSETEG00000019637	POLR2G	100	66.860	Echinops_telfairi
FBgn0051155	Rpb7	99	79.070	ENSEBUG00000000439	-	86	79.070	Eptatretus_burgeri
FBgn0051155	Rpb7	99	81.395	ENSEASG00005011357	POLR2G	100	81.395	Equus_asinus_asinus
FBgn0051155	Rpb7	98	81.065	ENSECAG00000021465	POLR2G	87	81.065	Equus_caballus
FBgn0051155	Rpb7	99	54.651	ENSEEUG00000007416	POLR2G	100	54.651	Erinaceus_europaeus
FBgn0051155	Rpb7	99	81.395	ENSELUG00000003401	polr2g	100	81.395	Esox_lucius
FBgn0051155	Rpb7	99	81.395	ENSFCAG00000026072	POLR2G	62	81.395	Felis_catus
FBgn0051155	Rpb7	99	81.395	ENSFDAG00000020977	POLR2G	100	81.395	Fukomys_damarensis
FBgn0051155	Rpb7	99	80.814	ENSFHEG00000003053	polr2gl	100	80.814	Fundulus_heteroclitus
FBgn0051155	Rpb7	95	80.488	ENSGMOG00000000535	polr2gl	100	80.488	Gadus_morhua
FBgn0051155	Rpb7	97	79.167	ENSGAFG00000001773	polr2gl	100	79.167	Gambusia_affinis
FBgn0051155	Rpb7	99	81.395	ENSGACG00000017706	polr2gl	100	81.395	Gasterosteus_aculeatus
FBgn0051155	Rpb7	97	80.952	ENSGAGG00000001303	POLR2G	100	80.952	Gopherus_agassizii
FBgn0051155	Rpb7	99	81.395	ENSGGOG00000011739	POLR2G	100	81.395	Gorilla_gorilla
FBgn0051155	Rpb7	98	78.698	ENSHBUG00000011421	polr2gl	93	78.698	Haplochromis_burtoni
FBgn0051155	Rpb7	99	81.395	ENSHGLG00000004851	POLR2G	100	81.395	Heterocephalus_glaber_female
FBgn0051155	Rpb7	99	77.907	ENSHGLG00100018441	POLR2G	100	77.907	Heterocephalus_glaber_male
FBgn0051155	Rpb7	99	81.395	ENSHCOG00000009499	polr2gl	91	81.395	Hippocampus_comes
FBgn0051155	Rpb7	99	81.977	ENSIPUG00000000671	polr2g	100	81.977	Ictalurus_punctatus
FBgn0051155	Rpb7	99	81.977	ENSSTOG00000004391	POLR2G	100	81.977	Ictidomys_tridecemlineatus
FBgn0051155	Rpb7	99	81.395	ENSJJAG00000005019	Polr2g	100	81.395	Jaculus_jaculus
FBgn0051155	Rpb7	98	81.065	ENSKMAG00000011056	polr2gl	89	81.065	Kryptolebias_marmoratus
FBgn0051155	Rpb7	99	81.395	ENSLBEG00000001458	polr2gl	100	81.395	Labrus_bergylta
FBgn0051155	Rpb7	99	80.814	ENSLACG00000006420	POLR2G	100	80.814	Latimeria_chalumnae
FBgn0051155	Rpb7	99	81.395	ENSLAFG00000004354	POLR2G	100	81.395	Loxodonta_africana
FBgn0051155	Rpb7	99	81.395	ENSMFAG00000033674	POLR2G	100	81.395	Macaca_fascicularis
FBgn0051155	Rpb7	99	81.395	ENSMMUG00000014368	POLR2G	100	81.395	Macaca_mulatta
FBgn0051155	Rpb7	99	81.395	ENSMNEG00000041523	POLR2G	100	81.395	Macaca_nemestrina
FBgn0051155	Rpb7	99	81.395	ENSMLEG00000032928	POLR2G	100	81.395	Mandrillus_leucophaeus
FBgn0051155	Rpb7	95	79.878	ENSMAMG00000001188	polr2gl	100	79.878	Mastacembelus_armatus
FBgn0051155	Rpb7	99	80.814	ENSMZEG00005003618	polr2gl	100	80.814	Maylandia_zebra
FBgn0051155	Rpb7	54	87.234	ENSMAUG00000013079	Polr2g	100	87.234	Mesocricetus_auratus
FBgn0051155	Rpb7	99	81.395	ENSMICG00000009967	POLR2G	100	81.395	Microcebus_murinus
FBgn0051155	Rpb7	98	76.471	ENSMOCG00000010638	Polr2g	98	76.471	Microtus_ochrogaster
FBgn0051155	Rpb7	98	81.065	ENSMMOG00000003102	polr2gl	93	81.065	Mola_mola
FBgn0051155	Rpb7	98	81.065	ENSMODG00000007984	POLR2G	98	81.065	Monodelphis_domestica
FBgn0051155	Rpb7	99	81.395	ENSMALG00000013385	polr2gl	100	81.395	Monopterus_albus
FBgn0051155	Rpb7	99	81.395	MGP_CAROLIEiJ_G0022653	Polr2g	100	81.395	Mus_caroli
FBgn0051155	Rpb7	99	81.395	ENSMUSG00000071662	Polr2g	100	81.395	Mus_musculus
FBgn0051155	Rpb7	99	81.395	MGP_PahariEiJ_G0014148	Polr2g	100	81.395	Mus_pahari
FBgn0051155	Rpb7	99	81.395	MGP_SPRETEiJ_G0023566	Polr2g	100	81.395	Mus_spretus
FBgn0051155	Rpb7	99	81.395	ENSMPUG00000013667	POLR2G	100	81.395	Mustela_putorius_furo
FBgn0051155	Rpb7	99	80.233	ENSMLUG00000003971	-	100	80.233	Myotis_lucifugus
FBgn0051155	Rpb7	99	81.395	ENSMLUG00000011039	-	100	81.395	Myotis_lucifugus
FBgn0051155	Rpb7	99	81.395	ENSNGAG00000020624	Polr2g	100	81.395	Nannospalax_galili
FBgn0051155	Rpb7	92	78.750	ENSNBRG00000003949	polr2gl	99	78.750	Neolamprologus_brichardi
FBgn0051155	Rpb7	98	64.497	ENSNLEG00000004097	-	91	64.497	Nomascus_leucogenys
FBgn0051155	Rpb7	97	80.952	ENSMEUG00000011547	POLR2G	100	80.952	Notamacropus_eugenii
FBgn0051155	Rpb7	99	65.698	ENSOPRG00000014769	POLR2G	100	65.698	Ochotona_princeps
FBgn0051155	Rpb7	99	58.721	ENSODEG00000005609	-	100	58.721	Octodon_degus
FBgn0051155	Rpb7	90	73.718	ENSODEG00000018495	-	100	73.718	Octodon_degus
FBgn0051155	Rpb7	99	81.395	ENSODEG00000002048	-	100	81.395	Octodon_degus
FBgn0051155	Rpb7	99	81.395	ENSONIG00000005183	polr2gl	100	81.395	Oreochromis_niloticus
FBgn0051155	Rpb7	99	81.395	ENSOANG00000005808	POLR2G	100	81.395	Ornithorhynchus_anatinus
FBgn0051155	Rpb7	99	81.395	ENSOCUG00000009485	POLR2G	100	81.395	Oryctolagus_cuniculus
FBgn0051155	Rpb7	99	81.395	ENSORLG00000003154	polr2gl	100	81.395	Oryzias_latipes
FBgn0051155	Rpb7	98	79.290	ENSORLG00020017682	polr2gl	99	79.290	Oryzias_latipes_hni
FBgn0051155	Rpb7	99	81.395	ENSORLG00015018537	polr2gl	100	81.395	Oryzias_latipes_hsok
FBgn0051155	Rpb7	99	81.395	ENSOMEG00000020086	polr2gl	100	81.395	Oryzias_melastigma
FBgn0051155	Rpb7	99	68.750	ENSOGAG00000032720	POLR2G	100	68.750	Otolemur_garnettii
FBgn0051155	Rpb7	98	80.000	ENSOARG00000016984	POLR2G	81	80.000	Ovis_aries
FBgn0051155	Rpb7	99	81.395	ENSPPAG00000039868	POLR2G	100	81.395	Pan_paniscus
FBgn0051155	Rpb7	99	81.395	ENSPPRG00000005669	POLR2G	100	81.395	Panthera_pardus
FBgn0051155	Rpb7	99	78.286	ENSPTIG00000015781	POLR2G	100	78.286	Panthera_tigris_altaica
FBgn0051155	Rpb7	99	81.395	ENSPANG00000025888	POLR2G	100	81.395	Papio_anubis
FBgn0051155	Rpb7	99	80.702	ENSPKIG00000000902	polr2gl	90	80.473	Paramormyrops_kingsleyae
FBgn0051155	Rpb7	99	81.395	ENSPSIG00000004285	POLR2G	82	81.395	Pelodiscus_sinensis
FBgn0051155	Rpb7	99	81.395	ENSPMGG00000008462	polr2gl	100	81.395	Periophthalmus_magnuspinnatus
FBgn0051155	Rpb7	99	81.395	ENSPEMG00000000685	Polr2g	100	81.395	Peromyscus_maniculatus_bairdii
FBgn0051155	Rpb7	99	81.395	ENSPCIG00000015245	-	100	81.395	Phascolarctos_cinereus
FBgn0051155	Rpb7	55	86.316	ENSPFOG00000024274	polr2gl	87	86.316	Poecilia_formosa
FBgn0051155	Rpb7	98	80.473	ENSPLAG00000022848	polr2gl	95	80.473	Poecilia_latipinna
FBgn0051155	Rpb7	99	80.814	ENSPMEG00000009317	polr2gl	100	80.814	Poecilia_mexicana
FBgn0051155	Rpb7	99	80.814	ENSPREG00000016633	polr2gl	100	80.814	Poecilia_reticulata
FBgn0051155	Rpb7	99	70.857	ENSPPYG00000003147	POLR2G	100	70.857	Pongo_abelii
FBgn0051155	Rpb7	99	81.395	ENSPCAG00000016408	POLR2G	100	81.395	Procavia_capensis
FBgn0051155	Rpb7	99	81.395	ENSPCOG00000024131	POLR2G	100	81.395	Propithecus_coquereli
FBgn0051155	Rpb7	99	80.814	ENSPVAG00000003481	POLR2G	100	80.814	Pteropus_vampyrus
FBgn0051155	Rpb7	99	80.814	ENSPNYG00000016136	polr2gl	100	80.814	Pundamilia_nyererei
FBgn0051155	Rpb7	99	81.395	ENSPNAG00000025210	polr2gl	100	81.395	Pygocentrus_nattereri
FBgn0051155	Rpb7	99	81.395	ENSRNOG00000019439	Polr2g	100	81.395	Rattus_norvegicus
FBgn0051155	Rpb7	99	81.395	ENSRBIG00000009173	POLR2G	100	81.395	Rhinopithecus_bieti
FBgn0051155	Rpb7	98	80.473	ENSRROG00000033543	POLR2G	89	68.391	Rhinopithecus_roxellana
FBgn0051155	Rpb7	99	41.040	YDR404C	RPB7	100	41.040	Saccharomyces_cerevisiae
FBgn0051155	Rpb7	99	81.395	ENSSBOG00000015220	POLR2G	100	81.395	Saimiri_boliviensis_boliviensis
FBgn0051155	Rpb7	99	81.395	ENSSHAG00000006006	POLR2G	100	81.395	Sarcophilus_harrisii
FBgn0051155	Rpb7	99	81.395	ENSSFOG00015001245	polr2g	100	81.395	Scleropages_formosus
FBgn0051155	Rpb7	99	80.814	ENSSMAG00000001197	polr2gl	100	80.814	Scophthalmus_maximus
FBgn0051155	Rpb7	99	81.395	ENSSDUG00000015179	polr2gl	100	81.395	Seriola_dumerili
FBgn0051155	Rpb7	99	81.395	ENSSLDG00000001822	polr2gl	100	81.395	Seriola_lalandi_dorsalis
FBgn0051155	Rpb7	99	81.395	ENSSPUG00000008614	POLR2G	100	81.395	Sphenodon_punctatus
FBgn0051155	Rpb7	98	81.065	ENSSPAG00000015276	polr2gl	99	81.065	Stegastes_partitus
FBgn0051155	Rpb7	99	81.395	ENSSSCG00000025571	POLR2G	100	81.395	Sus_scrofa
FBgn0051155	Rpb7	77	81.203	ENSTGUG00000014456	POLR2G	100	81.203	Taeniopygia_guttata
FBgn0051155	Rpb7	99	81.395	ENSTRUG00000002492	polr2gl	100	81.395	Takifugu_rubripes
FBgn0051155	Rpb7	99	68.023	ENSTBEG00000015752	POLR2G	100	68.023	Tupaia_belangeri
FBgn0051155	Rpb7	99	81.395	ENSTTRG00000002478	POLR2G	100	81.395	Tursiops_truncatus
FBgn0051155	Rpb7	99	81.395	ENSUAMG00000025968	POLR2G	100	81.395	Ursus_americanus
FBgn0051155	Rpb7	64	85.586	ENSUMAG00000014537	POLR2G	66	85.586	Ursus_maritimus
FBgn0051155	Rpb7	75	75.385	ENSVPAG00000009534	POLR2G	100	75.385	Vicugna_pacos
FBgn0051155	Rpb7	99	81.395	ENSVVUG00000029844	POLR2G	100	81.395	Vulpes_vulpes
FBgn0051155	Rpb7	99	81.977	ENSXETG00000006022	polr2g	100	81.977	Xenopus_tropicalis
FBgn0051155	Rpb7	98	80.473	ENSXCOG00000002005	polr2gl	93	80.473	Xiphophorus_couchianus
FBgn0051155	Rpb7	98	80.473	ENSXMAG00000010063	polr2gl	93	80.473	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000291	nuclear-transcribed mRNA catabolic process, exonucleolytic	21873635.	IBA	Process
GO:0000932	P-body	21873635.	IBA	Component
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	10908585.	ISS	Function
GO:0005515	protein binding	12482983.	IPI	Function
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005665	RNA polymerase II, core complex	12482983.	IPI	Component
GO:0005665	RNA polymerase II, core complex	10908585.	ISS	Component
GO:0006366	transcription by RNA polymerase II	10908585.	ISS	Process
GO:0006367	transcription initiation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0031369	translation initiation factor binding	21873635.	IBA	Function
GO:0045948	positive regulation of translational initiation	21873635.	IBA	Process
GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	21873635.	IBA	Process