EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0051450 (Gene tree)
Gene ID: 326141
Gene Symbol: mRpS18A
Alias: -
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 677 bases
Position: chr3R:8561917-8562593
Accession: FBgn0051450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081380	Ribosomal_S18	PF01084.20	1.2e-16	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0081897	-	581	-	FBpp0081380	155 (aa)	-	Q8IGA1

Gene Model

Click here to download FBgn0051450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0051450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0051450	mRpS18A	65	39.806	ENSG00000096080	MRPS18A	74	38.542	Homo_sapiens
FBgn0051450	mRpS18A	83	35.075	ENSAMEG00000012117	MRPS18A	66	35.075	Ailuropoda_melanoleuca
FBgn0051450	mRpS18A	84	38.636	ENSACIG00000017782	mrps18a	62	38.636	Amphilophus_citrinellus
FBgn0051450	mRpS18A	63	38.095	ENSAOCG00000005723	mrps18a	57	38.095	Amphiprion_ocellaris
FBgn0051450	mRpS18A	84	35.036	ENSAPEG00000006971	mrps18a	62	35.036	Amphiprion_percula
FBgn0051450	mRpS18A	92	35.862	ENSATEG00000003132	mrps18a	67	35.862	Anabas_testudineus
FBgn0051450	mRpS18A	77	39.024	ENSAPLG00000016280	MRPS18A	74	39.024	Anas_platyrhynchos
FBgn0051450	mRpS18A	85	38.519	ENSACAG00000000642	MRPS18A	69	38.519	Anolis_carolinensis
FBgn0051450	mRpS18A	83	36.296	ENSANAG00000030889	MRPS18A	99	35.156	Aotus_nancymaae
FBgn0051450	mRpS18A	84	37.879	ENSACLG00000008170	mrps18a	62	37.879	Astatotilapia_calliptera
FBgn0051450	mRpS18A	83	38.931	ENSAMXG00000036348	mrps18a	64	38.931	Astyanax_mexicanus
FBgn0051450	mRpS18A	66	39.423	ENSBTAG00000025571	MRPS18A	52	39.423	Bos_taurus
FBgn0051450	mRpS18A	65	39.806	ENSCJAG00000017382	MRPS18A	74	38.542	Callithrix_jacchus
FBgn0051450	mRpS18A	83	34.586	ENSCAFG00000001928	MRPS18A	67	34.586	Canis_familiaris
FBgn0051450	mRpS18A	83	34.586	ENSCAFG00020012064	MRPS18A	56	34.586	Canis_lupus_dingo
FBgn0051450	mRpS18A	66	40.385	ENSCHIG00000013039	MRPS18A	52	40.385	Capra_hircus
FBgn0051450	mRpS18A	66	39.423	ENSTSYG00000001390	MRPS18A	74	38.542	Carlito_syrichta
FBgn0051450	mRpS18A	65	39.806	ENSCPOG00000022949	MRPS18A	52	39.806	Cavia_porcellus
FBgn0051450	mRpS18A	65	38.835	ENSCCAG00000021108	MRPS18A	52	38.835	Cebus_capucinus
FBgn0051450	mRpS18A	65	39.806	ENSCATG00000012963	MRPS18A	74	38.542	Cercocebus_atys
FBgn0051450	mRpS18A	66	39.423	ENSCLAG00000012929	MRPS18A	52	39.423	Chinchilla_lanigera
FBgn0051450	mRpS18A	65	39.806	ENSCSAG00000012127	MRPS18A	52	39.806	Chlorocebus_sabaeus
FBgn0051450	mRpS18A	94	35.811	ENSCPBG00000025243	MRPS18A	74	35.811	Chrysemys_picta_bellii
FBgn0051450	mRpS18A	63	30.928	ENSCING00000024771	-	50	30.928	Ciona_intestinalis
FBgn0051450	mRpS18A	61	34.737	ENSCSAVG00000009539	-	54	34.737	Ciona_savignyi
FBgn0051450	mRpS18A	65	39.806	ENSCANG00000039873	MRPS18A	74	38.542	Colobus_angolensis_palliatus
FBgn0051450	mRpS18A	78	37.097	ENSCGRG00001017882	Mrps18a	68	37.097	Cricetulus_griseus_chok1gshd
FBgn0051450	mRpS18A	84	37.037	ENSCSEG00000019650	mrps18a	58	37.778	Cynoglossus_semilaevis
FBgn0051450	mRpS18A	98	31.818	ENSCVAG00000006511	mrps18a	72	31.818	Cyprinodon_variegatus
FBgn0051450	mRpS18A	82	35.606	ENSDARG00000024465	mrps18a	60	35.606	Danio_rerio
FBgn0051450	mRpS18A	65	39.806	ENSDNOG00000035755	MRPS18A	51	39.806	Dasypus_novemcinctus
FBgn0051450	mRpS18A	78	37.903	ENSDORG00000014583	Mrps18a	61	37.903	Dipodomys_ordii
FBgn0051450	mRpS18A	83	35.606	ENSFCAG00000036031	MRPS18A	97	34.400	Felis_catus
FBgn0051450	mRpS18A	92	35.135	ENSFALG00000011356	MRPS18A	74	35.135	Ficedula_albicollis
FBgn0051450	mRpS18A	65	39.806	ENSFDAG00000012875	MRPS18A	51	39.806	Fukomys_damarensis
FBgn0051450	mRpS18A	75	36.134	ENSFHEG00000009014	mrps18a	55	36.134	Fundulus_heteroclitus
FBgn0051450	mRpS18A	90	36.986	ENSGMOG00000012493	mrps18a	67	36.986	Gadus_morhua
FBgn0051450	mRpS18A	70	41.818	ENSGALG00000010296	MRPS18A	74	41.818	Gallus_gallus
FBgn0051450	mRpS18A	98	35.065	ENSGAFG00000005211	mrps18a	72	35.065	Gambusia_affinis
FBgn0051450	mRpS18A	90	35.172	ENSGACG00000013370	mrps18a	67	37.589	Gasterosteus_aculeatus
FBgn0051450	mRpS18A	67	38.318	ENSGGOG00000006303	-	74	38.542	Gorilla_gorilla
FBgn0051450	mRpS18A	84	37.879	ENSHBUG00000014682	mrps18a	62	37.879	Haplochromis_burtoni
FBgn0051450	mRpS18A	92	36.735	ENSHGLG00000014356	MRPS18A	68	36.735	Heterocephalus_glaber_female
FBgn0051450	mRpS18A	92	36.735	ENSHGLG00100010988	MRPS18A	68	36.735	Heterocephalus_glaber_male
FBgn0051450	mRpS18A	82	36.154	ENSHCOG00000000856	mrps18a	60	36.154	Hippocampus_comes
FBgn0051450	mRpS18A	72	41.228	ENSIPUG00000017406	mrps18a	65	36.691	Ictalurus_punctatus
FBgn0051450	mRpS18A	65	40.777	ENSJJAG00000006567	Mrps18a	52	40.777	Jaculus_jaculus
FBgn0051450	mRpS18A	76	37.500	ENSKMAG00000014910	mrps18a	56	37.500	Kryptolebias_marmoratus
FBgn0051450	mRpS18A	96	35.099	ENSLBEG00000003391	mrps18a	68	35.099	Labrus_bergylta
FBgn0051450	mRpS18A	65	39.815	ENSLAFG00000001168	MRPS18A	52	39.815	Loxodonta_africana
FBgn0051450	mRpS18A	65	39.806	ENSMFAG00000038311	MRPS18A	74	38.542	Macaca_fascicularis
FBgn0051450	mRpS18A	65	39.806	ENSMMUG00000014749	MRPS18A	74	38.542	Macaca_mulatta
FBgn0051450	mRpS18A	65	39.806	ENSMNEG00000044642	MRPS18A	74	38.542	Macaca_nemestrina
FBgn0051450	mRpS18A	61	40.625	ENSMLEG00000041828	MRPS18A	59	40.625	Mandrillus_leucophaeus
FBgn0051450	mRpS18A	85	37.956	ENSMAMG00000015478	mrps18a	67	36.486	Mastacembelus_armatus
FBgn0051450	mRpS18A	84	37.879	ENSMZEG00005014925	mrps18a	62	37.879	Maylandia_zebra
FBgn0051450	mRpS18A	92	37.584	ENSMGAG00000010915	MRPS18A	74	37.584	Meleagris_gallopavo
FBgn0051450	mRpS18A	65	42.718	ENSMICG00000005062	MRPS18A	74	41.667	Microcebus_murinus
FBgn0051450	mRpS18A	83	36.296	ENSMOCG00000021207	-	68	36.296	Microtus_ochrogaster
FBgn0051450	mRpS18A	78	33.594	ENSMOCG00000015168	-	63	33.594	Microtus_ochrogaster
FBgn0051450	mRpS18A	84	38.636	ENSMMOG00000015248	mrps18a	62	38.636	Mola_mola
FBgn0051450	mRpS18A	81	35.878	ENSMODG00000018952	MRPS18A	54	35.878	Monodelphis_domestica
FBgn0051450	mRpS18A	85	36.842	ENSMALG00000017044	mrps18a	57	36.842	Monopterus_albus
FBgn0051450	mRpS18A	83	36.765	MGP_CAROLIEiJ_G0021656	Mrps18a	90	36.765	Mus_caroli
FBgn0051450	mRpS18A	83	36.765	ENSMUSG00000023967	Mrps18a	90	36.765	Mus_musculus
FBgn0051450	mRpS18A	83	36.765	MGP_PahariEiJ_G0020648	Mrps18a	90	36.765	Mus_pahari
FBgn0051450	mRpS18A	83	36.765	MGP_SPRETEiJ_G0022568	Mrps18a	90	36.765	Mus_spretus
FBgn0051450	mRpS18A	83	36.364	ENSMLUG00000017755	MRPS18A	66	36.364	Myotis_lucifugus
FBgn0051450	mRpS18A	65	38.835	ENSNGAG00000020052	Mrps18a	52	38.835	Nannospalax_galili
FBgn0051450	mRpS18A	84	37.121	ENSNBRG00000021152	mrps18a	62	37.121	Neolamprologus_brichardi
FBgn0051450	mRpS18A	65	39.806	ENSNLEG00000003865	MRPS18A	74	38.542	Nomascus_leucogenys
FBgn0051450	mRpS18A	65	40.777	ENSODEG00000015388	MRPS18A	52	40.777	Octodon_degus
FBgn0051450	mRpS18A	84	37.879	ENSONIG00000000609	mrps18a	62	37.879	Oreochromis_niloticus
FBgn0051450	mRpS18A	61	41.237	ENSOANG00000001955	MRPS18A	60	41.237	Ornithorhynchus_anatinus
FBgn0051450	mRpS18A	83	36.765	ENSOCUG00000005544	MRPS18A	67	36.765	Oryctolagus_cuniculus
FBgn0051450	mRpS18A	81	36.641	ENSORLG00000023864	mrps18a	62	36.641	Oryzias_latipes
FBgn0051450	mRpS18A	78	37.398	ENSORLG00020002882	mrps18a	58	37.398	Oryzias_latipes_hni
FBgn0051450	mRpS18A	83	34.351	ENSORLG00015022065	mrps18a	62	34.351	Oryzias_latipes_hsok
FBgn0051450	mRpS18A	96	33.750	ENSOMEG00000018124	mrps18a	73	33.750	Oryzias_melastigma
FBgn0051450	mRpS18A	65	40.777	ENSOGAG00000026551	MRPS18A	52	40.777	Otolemur_garnettii
FBgn0051450	mRpS18A	66	40.385	ENSOARG00000008279	MRPS18A	52	40.385	Ovis_aries
FBgn0051450	mRpS18A	65	39.806	ENSPPAG00000036291	MRPS18A	74	38.542	Pan_paniscus
FBgn0051450	mRpS18A	83	35.606	ENSPPRG00000006429	MRPS18A	74	40.625	Panthera_pardus
FBgn0051450	mRpS18A	83	36.364	ENSPTIG00000001653	MRPS18A	97	35.200	Panthera_tigris_altaica
FBgn0051450	mRpS18A	65	39.806	ENSPTRG00000018209	MRPS18A	74	38.542	Pan_troglodytes
FBgn0051450	mRpS18A	65	39.806	ENSPANG00000006967	MRPS18A	74	38.542	Papio_anubis
FBgn0051450	mRpS18A	81	38.583	ENSPSIG00000013672	MRPS18A	64	38.583	Pelodiscus_sinensis
FBgn0051450	mRpS18A	65	39.806	ENSPEMG00000000405	Mrps18a	52	39.806	Peromyscus_maniculatus_bairdii
FBgn0051450	mRpS18A	80	37.302	ENSPMAG00000007012	mrps18a	66	37.302	Petromyzon_marinus
FBgn0051450	mRpS18A	77	36.885	ENSPCIG00000024858	MRPS18A	72	38.393	Phascolarctos_cinereus
FBgn0051450	mRpS18A	77	37.190	ENSPFOG00000009046	mrps18a	74	37.190	Poecilia_formosa
FBgn0051450	mRpS18A	92	36.111	ENSPLAG00000011106	mrps18a	67	36.111	Poecilia_latipinna
FBgn0051450	mRpS18A	92	34.722	ENSPMEG00000000736	mrps18a	67	34.722	Poecilia_mexicana
FBgn0051450	mRpS18A	92	36.111	ENSPREG00000012172	mrps18a	62	38.655	Poecilia_reticulata
FBgn0051450	mRpS18A	65	39.806	ENSPPYG00000017282	MRPS18A	52	39.806	Pongo_abelii
FBgn0051450	mRpS18A	65	39.806	ENSPCOG00000014911	MRPS18A	74	38.542	Propithecus_coquereli
FBgn0051450	mRpS18A	84	37.879	ENSPNYG00000014753	mrps18a	62	37.879	Pundamilia_nyererei
FBgn0051450	mRpS18A	78	39.516	ENSRNOG00000019511	Mrps18a	61	39.516	Rattus_norvegicus
FBgn0051450	mRpS18A	65	39.806	ENSRBIG00000028789	MRPS18A	74	38.542	Rhinopithecus_bieti
FBgn0051450	mRpS18A	65	39.806	ENSRROG00000042368	-	74	38.542	Rhinopithecus_roxellana
FBgn0051450	mRpS18A	83	36.296	ENSSBOG00000019943	MRPS18A	97	35.156	Saimiri_boliviensis_boliviensis
FBgn0051450	mRpS18A	66	39.423	ENSSHAG00000015048	-	52	39.423	Sarcophilus_harrisii
FBgn0051450	mRpS18A	73	37.391	ENSSFOG00015005628	mrps18a	54	37.391	Scleropages_formosus
FBgn0051450	mRpS18A	98	34.416	ENSSMAG00000009353	mrps18a	73	34.416	Scophthalmus_maximus
FBgn0051450	mRpS18A	86	37.956	ENSSPUG00000011517	MRPS18A	69	37.956	Sphenodon_punctatus
FBgn0051450	mRpS18A	85	37.313	ENSSPAG00000000034	mrps18a	63	37.313	Stegastes_partitus
FBgn0051450	mRpS18A	83	34.586	ENSSSCG00000001692	MRPS18A	67	34.586	Sus_scrofa
FBgn0051450	mRpS18A	72	41.228	ENSTGUG00000008142	MRPS18A	73	41.228	Taeniopygia_guttata
FBgn0051450	mRpS18A	86	37.037	ENSTRUG00000025134	mrps18a	63	37.037	Takifugu_rubripes
FBgn0051450	mRpS18A	81	36.719	ENSTNIG00000016302	mrps18a	60	36.719	Tetraodon_nigroviridis
FBgn0051450	mRpS18A	83	34.328	ENSUAMG00000013758	MRPS18A	66	34.328	Ursus_americanus
FBgn0051450	mRpS18A	65	37.864	ENSUMAG00000005910	MRPS18A	52	37.864	Ursus_maritimus
FBgn0051450	mRpS18A	83	34.586	ENSVVUG00000029092	-	67	34.586	Vulpes_vulpes
FBgn0051450	mRpS18A	70	43.243	ENSXETG00000003270	mrps18a	70	43.243	Xenopus_tropicalis
FBgn0051450	mRpS18A	75	38.655	ENSXMAG00000004867	mrps18a	66	36.364	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279123.11402041.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	11279123.11402041.	ISS	Component
GO:0005763	mitochondrial small ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	11279123.	ISS	Process
GO:0032543	mitochondrial translation	11402041.	ISS	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function