EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0051719 (Gene tree)
Gene ID: 34438
Gene Symbol: RluA-1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 11010 bases
Position: chr2L:10463340-10474349
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0079629	PseudoU_synth_2	PF00849.22	9.4e-32	1	1
FBpp0079630	PseudoU_synth_2	PF00849.22	9.4e-32	1	1
FBpp0079631	PseudoU_synth_2	PF00849.22	9.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0337008	-	2715	-	FBpp0307937	378 (aa)	-	M9PCT9
FBtr0080041	-	2914	-	FBpp0079631	739 (aa)	-	Q9VKV0
FBtr0080040	-	3207	-	FBpp0079630	739 (aa)	-	Q86P70
FBtr0080039	-	3073	-	FBpp0079629	739 (aa)	-	Q9VKV0

Gene Model

Click here to download FBgn0051719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0051719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0051719	RluA-1	66	65.182	FBgn0032256	RluA-2	85	65.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0051719	RluA-1	63	47.966	ENSG00000166133	RPUSD2	79	47.966	Homo_sapiens
FBgn0051719	RluA-1	63	46.996	ENSAPOG00000000817	rpusd2	94	42.703	Acanthochromis_polyacanthus
FBgn0051719	RluA-1	63	48.085	ENSAMEG00000016996	RPUSD2	79	48.085	Ailuropoda_melanoleuca
FBgn0051719	RluA-1	63	47.034	ENSACIG00000024029	rpusd2	94	45.383	Amphilophus_citrinellus
FBgn0051719	RluA-1	63	46.567	ENSAOCG00000015237	rpusd2	93	42.754	Amphiprion_ocellaris
FBgn0051719	RluA-1	63	47.257	ENSAPEG00000021763	rpusd2	93	43.393	Amphiprion_percula
FBgn0051719	RluA-1	63	44.910	ENSATEG00000015242	rpusd2	89	42.334	Anabas_testudineus
FBgn0051719	RluA-1	62	46.187	ENSAPLG00000004723	RPUSD2	99	46.943	Anas_platyrhynchos
FBgn0051719	RluA-1	63	46.467	ENSACAG00000013893	RPUSD2	95	44.939	Anolis_carolinensis
FBgn0051719	RluA-1	63	48.085	ENSANAG00000009691	RPUSD2	79	48.085	Aotus_nancymaae
FBgn0051719	RluA-1	63	47.083	ENSACLG00000019531	rpusd2	85	45.648	Astatotilapia_calliptera
FBgn0051719	RluA-1	62	45.494	ENSAMXG00000013376	rpusd2	96	40.068	Astyanax_mexicanus
FBgn0051719	RluA-1	63	46.795	ENSBTAG00000003193	RPUSD2	78	46.795	Bos_taurus
FBgn0051719	RluA-1	63	48.180	ENSCJAG00000020841	RPUSD2	79	48.180	Callithrix_jacchus
FBgn0051719	RluA-1	63	47.660	ENSCAFG00000009165	RPUSD2	78	47.660	Canis_familiaris
FBgn0051719	RluA-1	63	47.660	ENSCAFG00020005849	RPUSD2	78	47.660	Canis_lupus_dingo
FBgn0051719	RluA-1	63	47.009	ENSCHIG00000006152	RPUSD2	78	47.009	Capra_hircus
FBgn0051719	RluA-1	63	47.447	ENSTSYG00000012844	RPUSD2	79	47.447	Carlito_syrichta
FBgn0051719	RluA-1	63	47.558	ENSCPOG00000013201	RPUSD2	79	47.558	Cavia_porcellus
FBgn0051719	RluA-1	63	48.394	ENSCCAG00000024378	RPUSD2	79	48.394	Cebus_capucinus
FBgn0051719	RluA-1	63	48.822	ENSCATG00000043734	RPUSD2	79	48.822	Cercocebus_atys
FBgn0051719	RluA-1	63	46.581	ENSCLAG00000011862	RPUSD2	79	46.497	Chinchilla_lanigera
FBgn0051719	RluA-1	63	48.822	ENSCSAG00000007538	RPUSD2	84	48.822	Chlorocebus_sabaeus
FBgn0051719	RluA-1	51	46.457	ENSCHOG00000004834	RPUSD2	62	46.719	Choloepus_hoffmanni
FBgn0051719	RluA-1	63	46.512	ENSCPBG00000013419	RPUSD2	86	46.512	Chrysemys_picta_bellii
FBgn0051719	RluA-1	63	48.608	ENSCANG00000003659	RPUSD2	79	48.608	Colobus_angolensis_palliatus
FBgn0051719	RluA-1	63	47.966	ENSCGRG00001009839	Rpusd2	75	47.966	Cricetulus_griseus_chok1gshd
FBgn0051719	RluA-1	63	47.966	ENSCGRG00000012348	Rpusd2	77	47.966	Cricetulus_griseus_crigri
FBgn0051719	RluA-1	63	45.708	ENSCSEG00000001953	rpusd2	76	45.708	Cynoglossus_semilaevis
FBgn0051719	RluA-1	63	45.824	ENSCVAG00000010848	rpusd2	78	45.824	Cyprinodon_variegatus
FBgn0051719	RluA-1	62	46.320	ENSDARG00000060992	rpusd2	74	46.320	Danio_rerio
FBgn0051719	RluA-1	63	48.188	ENSDNOG00000047745	RPUSD2	79	48.188	Dasypus_novemcinctus
FBgn0051719	RluA-1	63	47.009	ENSDORG00000009092	Rpusd2	99	47.009	Dipodomys_ordii
FBgn0051719	RluA-1	63	47.257	ENSETEG00000008581	RPUSD2	80	47.257	Echinops_telfairi
FBgn0051719	RluA-1	62	42.495	ENSEBUG00000008283	-	52	38.667	Eptatretus_burgeri
FBgn0051719	RluA-1	63	47.447	ENSEASG00005016463	RPUSD2	77	47.447	Equus_asinus_asinus
FBgn0051719	RluA-1	63	47.447	ENSECAG00000024178	RPUSD2	77	47.447	Equus_caballus
FBgn0051719	RluA-1	63	40.977	ENSEEUG00000005132	RPUSD2	81	40.977	Erinaceus_europaeus
FBgn0051719	RluA-1	66	42.442	ENSELUG00000016786	rpusd2	87	42.442	Esox_lucius
FBgn0051719	RluA-1	63	47.447	ENSFCAG00000040796	RPUSD2	78	47.447	Felis_catus
FBgn0051719	RluA-1	62	46.725	ENSFALG00000001122	RPUSD2	93	46.725	Ficedula_albicollis
FBgn0051719	RluA-1	63	47.558	ENSFDAG00000003070	RPUSD2	84	47.558	Fukomys_damarensis
FBgn0051719	RluA-1	68	43.321	ENSFHEG00000007518	rpusd2	89	43.321	Fundulus_heteroclitus
FBgn0051719	RluA-1	63	43.441	ENSGMOG00000011014	rpusd2	97	41.633	Gadus_morhua
FBgn0051719	RluA-1	62	46.781	ENSGALG00000041216	RPUSD2	90	47.425	Gallus_gallus
FBgn0051719	RluA-1	62	44.708	ENSGAFG00000003390	rpusd2	75	44.708	Gambusia_affinis
FBgn0051719	RluA-1	63	43.697	ENSGACG00000008656	rpusd2	96	40.935	Gasterosteus_aculeatus
FBgn0051719	RluA-1	62	47.817	ENSGAGG00000013098	RPUSD2	82	47.817	Gopherus_agassizii
FBgn0051719	RluA-1	63	48.180	ENSGGOG00000006684	RPUSD2	79	48.180	Gorilla_gorilla
FBgn0051719	RluA-1	63	46.875	ENSHBUG00000023777	rpusd2	85	45.455	Haplochromis_burtoni
FBgn0051719	RluA-1	63	46.895	ENSHGLG00000012765	RPUSD2	78	46.895	Heterocephalus_glaber_female
FBgn0051719	RluA-1	63	46.895	ENSHGLG00100006653	RPUSD2	78	46.895	Heterocephalus_glaber_male
FBgn0051719	RluA-1	69	43.233	ENSHCOG00000015587	rpusd2	87	43.233	Hippocampus_comes
FBgn0051719	RluA-1	66	46.032	ENSIPUG00000021006	rpusd2	81	46.032	Ictalurus_punctatus
FBgn0051719	RluA-1	63	47.660	ENSSTOG00000025619	RPUSD2	77	47.660	Ictidomys_tridecemlineatus
FBgn0051719	RluA-1	63	47.974	ENSJJAG00000023160	Rpusd2	80	47.974	Jaculus_jaculus
FBgn0051719	RluA-1	63	46.624	ENSKMAG00000006618	rpusd2	78	46.822	Kryptolebias_marmoratus
FBgn0051719	RluA-1	66	42.885	ENSLBEG00000021571	rpusd2	84	43.080	Labrus_bergylta
FBgn0051719	RluA-1	62	45.513	ENSLACG00000017338	RPUSD2	97	45.513	Latimeria_chalumnae
FBgn0051719	RluA-1	63	46.022	ENSLOCG00000014755	rpusd2	87	46.022	Lepisosteus_oculatus
FBgn0051719	RluA-1	63	48.180	ENSLAFG00000015588	RPUSD2	81	48.180	Loxodonta_africana
FBgn0051719	RluA-1	63	48.822	ENSMFAG00000045062	RPUSD2	79	48.822	Macaca_fascicularis
FBgn0051719	RluA-1	63	48.822	ENSMMUG00000001483	RPUSD2	79	48.822	Macaca_mulatta
FBgn0051719	RluA-1	63	41.702	ENSMNEG00000041429	RPUSD2	78	41.702	Macaca_nemestrina
FBgn0051719	RluA-1	51	48.148	ENSMLEG00000036551	RPUSD2	80	48.148	Mandrillus_leucophaeus
FBgn0051719	RluA-1	63	46.667	ENSMAMG00000001077	rpusd2	77	46.667	Mastacembelus_armatus
FBgn0051719	RluA-1	63	47.083	ENSMZEG00005006947	rpusd2	94	45.648	Maylandia_zebra
FBgn0051719	RluA-1	62	45.987	ENSMGAG00000003058	RPUSD2	93	46.638	Meleagris_gallopavo
FBgn0051719	RluA-1	63	46.253	ENSMAUG00000020467	Rpusd2	77	46.253	Mesocricetus_auratus
FBgn0051719	RluA-1	63	47.974	ENSMICG00000028637	RPUSD2	78	47.974	Microcebus_murinus
FBgn0051719	RluA-1	63	47.122	ENSMOCG00000020061	Rpusd2	77	47.122	Microtus_ochrogaster
FBgn0051719	RluA-1	63	45.493	ENSMMOG00000012020	rpusd2	90	42.857	Mola_mola
FBgn0051719	RluA-1	63	45.708	ENSMODG00000000300	RPUSD2	79	45.708	Monodelphis_domestica
FBgn0051719	RluA-1	63	45.397	ENSMALG00000010024	rpusd2	87	42.804	Monopterus_albus
FBgn0051719	RluA-1	63	47.537	MGP_CAROLIEiJ_G0024130	Rpusd2	76	47.537	Mus_caroli
FBgn0051719	RluA-1	63	48.188	ENSMUSG00000027324	Rpusd2	76	48.188	Mus_musculus
FBgn0051719	RluA-1	63	47.761	MGP_PahariEiJ_G0025573	Rpusd2	76	47.761	Mus_pahari
FBgn0051719	RluA-1	63	47.761	MGP_SPRETEiJ_G0025046	Rpusd2	77	47.761	Mus_spretus
FBgn0051719	RluA-1	63	48.085	ENSMPUG00000008517	RPUSD2	78	48.085	Mustela_putorius_furo
FBgn0051719	RluA-1	63	48.511	ENSMLUG00000007971	RPUSD2	85	48.511	Myotis_lucifugus
FBgn0051719	RluA-1	63	47.335	ENSNGAG00000014126	Rpusd2	78	47.335	Nannospalax_galili
FBgn0051719	RluA-1	63	46.526	ENSNBRG00000010070	rpusd2	85	45.117	Neolamprologus_brichardi
FBgn0051719	RluA-1	63	47.957	ENSNLEG00000035735	RPUSD2	79	47.957	Nomascus_leucogenys
FBgn0051719	RluA-1	63	46.781	ENSMEUG00000008500	RPUSD2	82	46.781	Notamacropus_eugenii
FBgn0051719	RluA-1	63	47.752	ENSOPRG00000014177	-	79	47.752	Ochotona_princeps
FBgn0051719	RluA-1	63	48.180	ENSODEG00000017193	RPUSD2	80	48.180	Octodon_degus
FBgn0051719	RluA-1	69	44.381	ENSONIG00000020102	rpusd2	96	44.762	Oreochromis_niloticus
FBgn0051719	RluA-1	63	46.822	ENSOCUG00000015745	RPUSD2	76	46.822	Oryctolagus_cuniculus
FBgn0051719	RluA-1	77	40.559	ENSORLG00000015516	rpusd2	98	40.559	Oryzias_latipes
FBgn0051719	RluA-1	77	40.522	ENSORLG00020010533	rpusd2	98	40.522	Oryzias_latipes_hni
FBgn0051719	RluA-1	77	40.592	ENSORLG00015009206	rpusd2	98	40.592	Oryzias_latipes_hsok
FBgn0051719	RluA-1	63	44.301	ENSOMEG00000007355	rpusd2	80	41.538	Oryzias_melastigma
FBgn0051719	RluA-1	63	47.447	ENSOGAG00000004867	RPUSD2	82	47.447	Otolemur_garnettii
FBgn0051719	RluA-1	63	47.009	ENSOARG00000020235	RPUSD2	79	47.009	Ovis_aries
FBgn0051719	RluA-1	63	47.966	ENSPPAG00000032874	RPUSD2	79	47.966	Pan_paniscus
FBgn0051719	RluA-1	63	47.447	ENSPPRG00000010446	RPUSD2	79	47.447	Panthera_pardus
FBgn0051719	RluA-1	63	47.447	ENSPTIG00000013316	RPUSD2	79	47.447	Panthera_tigris_altaica
FBgn0051719	RluA-1	63	47.966	ENSPTRG00000006924	RPUSD2	79	47.966	Pan_troglodytes
FBgn0051719	RluA-1	63	48.822	ENSPANG00000019339	RPUSD2	79	48.822	Papio_anubis
FBgn0051719	RluA-1	66	42.545	ENSPKIG00000023017	rpusd2	81	42.545	Paramormyrops_kingsleyae
FBgn0051719	RluA-1	51	47.090	ENSPSIG00000012680	RPUSD2	99	47.090	Pelodiscus_sinensis
FBgn0051719	RluA-1	63	47.323	ENSPEMG00000012878	Rpusd2	80	47.323	Peromyscus_maniculatus_bairdii
FBgn0051719	RluA-1	52	55.732	ENSPCIG00000023199	RPUSD2	75	55.732	Phascolarctos_cinereus
FBgn0051719	RluA-1	63	46.072	ENSPFOG00000006829	rpusd2	78	46.072	Poecilia_formosa
FBgn0051719	RluA-1	63	46.072	ENSPLAG00000022914	rpusd2	88	46.072	Poecilia_latipinna
FBgn0051719	RluA-1	63	45.860	ENSPMEG00000009835	rpusd2	88	45.860	Poecilia_mexicana
FBgn0051719	RluA-1	63	45.435	ENSPREG00000016441	rpusd2	75	45.435	Poecilia_reticulata
FBgn0051719	RluA-1	63	47.660	ENSPPYG00000006355	RPUSD2	79	47.660	Pongo_abelii
FBgn0051719	RluA-1	68	44.814	ENSPCOG00000028019	RPUSD2	86	44.814	Propithecus_coquereli
FBgn0051719	RluA-1	63	48.401	ENSPVAG00000001837	RPUSD2	79	48.401	Pteropus_vampyrus
FBgn0051719	RluA-1	63	45.435	ENSPNYG00000021507	rpusd2	93	44.094	Pundamilia_nyererei
FBgn0051719	RluA-1	63	47.323	ENSRNOG00000010528	LOC100911166	76	47.323	Rattus_norvegicus
FBgn0051719	RluA-1	63	47.323	ENSRNOG00000046797	Rpusd2	76	47.323	Rattus_norvegicus
FBgn0051719	RluA-1	63	48.608	ENSRBIG00000030813	RPUSD2	79	48.608	Rhinopithecus_bieti
FBgn0051719	RluA-1	63	48.394	ENSRROG00000026664	RPUSD2	79	48.394	Rhinopithecus_roxellana
FBgn0051719	RluA-1	63	48.394	ENSSBOG00000035031	RPUSD2	79	48.394	Saimiri_boliviensis_boliviensis
FBgn0051719	RluA-1	51	44.562	ENSSHAG00000015108	RPUSD2	89	44.562	Sarcophilus_harrisii
FBgn0051719	RluA-1	66	43.623	ENSSFOG00015019057	rpusd2	81	43.623	Scleropages_formosus
FBgn0051719	RluA-1	63	45.877	ENSSMAG00000000903	rpusd2	86	45.877	Scophthalmus_maximus
FBgn0051719	RluA-1	63	45.833	ENSSDUG00000019139	rpusd2	79	45.833	Seriola_dumerili
FBgn0051719	RluA-1	63	45.833	ENSSLDG00000005938	rpusd2	79	45.833	Seriola_lalandi_dorsalis
FBgn0051719	RluA-1	63	47.021	ENSSARG00000002792	RPUSD2	79	47.021	Sorex_araneus
FBgn0051719	RluA-1	62	46.608	ENSSPUG00000001206	RPUSD2	84	46.608	Sphenodon_punctatus
FBgn0051719	RluA-1	62	47.289	ENSSPAG00000003578	rpusd2	88	43.691	Stegastes_partitus
FBgn0051719	RluA-1	63	48.394	ENSSSCG00000036700	RPUSD2	77	48.394	Sus_scrofa
FBgn0051719	RluA-1	62	43.737	ENSTRUG00000025880	rpusd2	94	41.879	Takifugu_rubripes
FBgn0051719	RluA-1	63	43.991	ENSTNIG00000017329	rpusd2	94	42.545	Tetraodon_nigroviridis
FBgn0051719	RluA-1	71	38.795	ENSTBEG00000007933	RPUSD2	87	38.795	Tupaia_belangeri
FBgn0051719	RluA-1	63	46.596	ENSTTRG00000010585	RPUSD2	78	46.596	Tursiops_truncatus
FBgn0051719	RluA-1	63	47.872	ENSUAMG00000001470	RPUSD2	84	47.872	Ursus_americanus
FBgn0051719	RluA-1	63	47.872	ENSUMAG00000012487	RPUSD2	69	47.872	Ursus_maritimus
FBgn0051719	RluA-1	63	47.650	ENSVPAG00000003844	RPUSD2	78	47.650	Vicugna_pacos
FBgn0051719	RluA-1	63	47.872	ENSVVUG00000026590	RPUSD2	78	47.872	Vulpes_vulpes
FBgn0051719	RluA-1	62	46.389	ENSXETG00000015973	rpusd2	91	46.389	Xenopus_tropicalis
FBgn0051719	RluA-1	63	44.374	ENSXMAG00000021821	rpusd2	88	44.374	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000455	enzyme-directed rRNA pseudouridine synthesis	21873635.	IBA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0009982	pseudouridine synthase activity	21873635.	IBA	Function