EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0053505 (Gene tree)
Gene ID: 3346176
Gene Symbol: U3-55K
Alias: -
Full Name: U3 small nuclear riboprotein factor 55K
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1914
Position: chr2R: 14858845-14860758
Accession: FBgn0053505
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0091445	-	1690	-	FBpp0090943	484 (aa)	-	Q8MSW9

Gene Model

Click here to download FBgn0053505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0053505's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0053505	U3-55K	80	45.316	ENSG00000114767	RRP9	88	44.213	Homo_sapiens
FBgn0053505	U3-55K	80	44.557	ENSMUSG00000041506	Rrp9	96	41.970	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	ISS	Function
GO:0005730	nucleolus	-	ISS	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0031428	box C/D snoRNP complex	-	ISS	Component
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0034511	U3 snoRNA binding	19285445.	IDA	Function